RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 ZNF428Q96B54 188 aa16.29■□□□□ 0.2
SIK3-209ENST00000480222 TSPYL4Q9UJ04 414 aa16.29■□□□□ 0.2
SIK3-209ENST00000480222 GJD4Q96KN9 370 aaPredicted RBP16.28■□□□□ 0.2
SIK3-209ENST00000480222 LGR6Q9HBX8 967 aa16.28■□□□□ 0.2
SIK3-209ENST00000480222 SOS1Q07889 1333 aaPredicted RBP16.27■□□□□ 0.2
SIK3-209ENST00000480222 SLC52A2Q9HAB3 445 aa16.27■□□□□ 0.2
SIK3-209ENST00000480222 RGS12O14924 1447 aa16.27■□□□□ 0.19
SIK3-209ENST00000480222 ERVV-2B6SEH9 535 aa16.26■□□□□ 0.19
SIK3-209ENST00000480222 EXOSC9Q06265 439 aaKnown RBP16.26■□□□□ 0.19
SIK3-209ENST00000480222 FAM98CQ17RN3 349 aaKnown RBP16.26■□□□□ 0.19
SIK3-209ENST00000480222 DDX54Q8TDD1 881 aaKnown RBP16.26■□□□□ 0.19
SIK3-209ENST00000480222 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
SIK3-209ENST00000480222 ITGB4P16144 1822 aa16.25■□□□□ 0.19
SIK3-209ENST00000480222 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
SIK3-209ENST00000480222 BTBD11A6QL63 1104 aa16.24■□□□□ 0.19
SIK3-209ENST00000480222 CABP4P57796 275 aa16.23■□□□□ 0.19
SIK3-209ENST00000480222 LAMB4A4D0S4 1761 aa16.23■□□□□ 0.19
SIK3-209ENST00000480222 BCL9O00512 1426 aa16.22■□□□□ 0.19
SIK3-209ENST00000480222 ONECUT3O60422 494 aaPredicted RBP16.22■□□□□ 0.19
SIK3-209ENST00000480222 TWISTNBQ3B726 338 aaPredicted RBP16.22■□□□□ 0.19
SIK3-209ENST00000480222 HOXB7P09629 217 aa16.21■□□□□ 0.19
SIK3-209ENST00000480222 RBM6P78332 1123 aaKnown RBP16.21■□□□□ 0.19
SIK3-209ENST00000480222 ALDH1L2Q3SY69 923 aa16.21■□□□□ 0.19
SIK3-209ENST00000480222 QTRT2Q9H974 415 aaKnown RBP16.21■□□□□ 0.19
SIK3-209ENST00000480222 SUPT16HQ9Y5B9 1047 aaKnown RBP16.21■□□□□ 0.19
SIK3-209ENST00000480222 NHSQ6T4R5 1651 aa16.21■□□□□ 0.18
SIK3-209ENST00000480222 A0A0G2JS52 829 aa16.2■□□□□ 0.18
SIK3-209ENST00000480222 RARSP54136 660 aaKnown RBP16.2■□□□□ 0.18
SIK3-209ENST00000480222 RRP1P56182 461 aaKnown RBP16.2■□□□□ 0.18
SIK3-209ENST00000480222 MYT1Q01538 1121 aa16.2■□□□□ 0.18
SIK3-209ENST00000480222 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.2■□□□□ 0.18
SIK3-209ENST00000480222 NFATC2IPQ8NCF5 419 aa16.2■□□□□ 0.18
SIK3-209ENST00000480222 CHMP4AQ9BY43 222 aa16.2■□□□□ 0.18
SIK3-209ENST00000480222 TMOD3Q9NYL9 352 aa16.2■□□□□ 0.18
SIK3-209ENST00000480222 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
SIK3-209ENST00000480222 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
SIK3-209ENST00000480222 C5P01031 1676 aa16.19■□□□□ 0.18
SIK3-209ENST00000480222 HEG1Q9ULI3 1381 aa16.19■□□□□ 0.18
SIK3-209ENST00000480222 VAMP4O75379 141 aa16.19■□□□□ 0.18
SIK3-209ENST00000480222 NEFLP07196 543 aa16.19■□□□□ 0.18
SIK3-209ENST00000480222 ZNF790Q6PG37 636 aa16.19■□□□□ 0.18
SIK3-209ENST00000480222 TTC5Q8N0Z6 440 aa16.19■□□□□ 0.18
SIK3-209ENST00000480222 MARCH10Q8NA82 808 aaPredicted RBP16.19■□□□□ 0.18
SIK3-209ENST00000480222 C8orf58Q8NAV2 365 aa16.19■□□□□ 0.18
SIK3-209ENST00000480222 SRCAPQ6ZRS2 3230 aa16.19■□□□□ 0.18
SIK3-209ENST00000480222 KIF16BQ96L93 1317 aa16.19■□□□□ 0.18
SIK3-209ENST00000480222 EIF4A1P60842 406 aaKnown RBP16.18■□□□□ 0.18
SIK3-209ENST00000480222 CICQ96RK0 1608 aaPredicted RBP16.18■□□□□ 0.18
SIK3-209ENST00000480222 CACNA1FO60840 1977 aa16.18■□□□□ 0.18
SIK3-209ENST00000480222 BRPF1P55201 1214 aaPredicted RBP16.17■□□□□ 0.18
SIK3-209ENST00000480222 TSPYL6Q8N831 410 aa16.17■□□□□ 0.18
SIK3-209ENST00000480222 SMC4Q9NTJ3 1288 aa16.17■□□□□ 0.18
SIK3-209ENST00000480222 SEPT12Q8IYM1 358 aa16.16■□□□□ 0.18
SIK3-209ENST00000480222 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
SIK3-209ENST00000480222 BRWD3Q6RI45 1802 aa16.16■□□□□ 0.18
SIK3-209ENST00000480222 KRT24Q2M2I5 525 aa16.15■□□□□ 0.18
SIK3-209ENST00000480222 FMNL2Q96PY5 1086 aa16.15■□□□□ 0.18
SIK3-209ENST00000480222 ELL2O00472 640 aaPredicted RBP16.14■□□□□ 0.17
SIK3-209ENST00000480222 BCAR3O75815 825 aa16.14■□□□□ 0.17
SIK3-209ENST00000480222 SBF2Q86WG5 1849 aa16.14■□□□□ 0.17
SIK3-209ENST00000480222 ZNF831Q5JPB2 1677 aa16.14■□□□□ 0.17
SIK3-209ENST00000480222 KCNQ3O43525 872 aa16.13■□□□□ 0.17
SIK3-209ENST00000480222 SLC39A6Q13433 755 aa16.13■□□□□ 0.17
SIK3-209ENST00000480222 CCDC30Q5VVM6 783 aa16.13■□□□□ 0.17
SIK3-209ENST00000480222 PIGBQ92521 554 aa16.13■□□□□ 0.17
SIK3-209ENST00000480222 GIGYF1O75420 1035 aaPredicted RBP16.12■□□□□ 0.17
SIK3-209ENST00000480222 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
SIK3-209ENST00000480222 HDGFL1Q5TGJ6 251 aa16.12■□□□□ 0.17
SIK3-209ENST00000480222 ZNF496Q96IT1 587 aaPredicted RBP16.12■□□□□ 0.17
SIK3-209ENST00000480222 BCL2L13Q9BXK5 485 aa16.12■□□□□ 0.17
SIK3-209ENST00000480222 STK31Q9BXU1 1019 aa16.12■□□□□ 0.17
SIK3-209ENST00000480222 BTAF1O14981 1849 aa16.12■□□□□ 0.17
SIK3-209ENST00000480222 SNRPA1P09661 255 aaKnown RBP16.11■□□□□ 0.17
SIK3-209ENST00000480222 MRPL50Q8N5N7 158 aaKnown RBP16.11■□□□□ 0.17
SIK3-209ENST00000480222 IPO8O15397 1037 aaKnown RBP16.1■□□□□ 0.17
SIK3-209ENST00000480222 MS4A1P11836 297 aa16.1■□□□□ 0.17
SIK3-209ENST00000480222 PRIM1P49642 420 aaKnown RBP16.1■□□□□ 0.17
SIK3-209ENST00000480222 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
SIK3-209ENST00000480222 VSIG10Q8N0Z9 540 aa16.1■□□□□ 0.17
SIK3-209ENST00000480222 SYTL4Q96C24 671 aaPredicted RBP16.1■□□□□ 0.17
SIK3-209ENST00000480222 EP400Q96L91 3159 aa16.1■□□□□ 0.17
SIK3-209ENST00000480222 TJP1Q07157 1748 aa16.1■□□□□ 0.17
SIK3-209ENST00000480222 N4BP2Q86UW6 1770 aaPredicted RBP16.09■□□□□ 0.17
SIK3-209ENST00000480222 PDE3AQ14432 1141 aa16.09■□□□□ 0.17
SIK3-209ENST00000480222 ERICH6BQ5W0A0 696 aa16.09■□□□□ 0.17
SIK3-209ENST00000480222 ARHGAP45Q92619 1136 aa16.09■□□□□ 0.17
SIK3-209ENST00000480222 ATG3Q9NT62 314 aa16.09■□□□□ 0.17
SIK3-209ENST00000480222 PTPRCP08575 1304 aa16.09■□□□□ 0.17
SIK3-209ENST00000480222 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
SIK3-209ENST00000480222 KRT27Q7Z3Y8 459 aa16.08■□□□□ 0.16
SIK3-209ENST00000480222 FRAT1Q92837 279 aaPredicted RBP16.08■□□□□ 0.16
SIK3-209ENST00000480222 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
SIK3-209ENST00000480222 KAT6BQ8WYB5 2073 aa16.07■□□□□ 0.16
SIK3-209ENST00000480222 ATF7IPQ6VMQ6 1270 aa16.07■□□□□ 0.16
SIK3-209ENST00000480222 ACSBG1Q96GR2 724 aa16.07■□□□□ 0.16
SIK3-209ENST00000480222 TEX13AQ9BXU3 409 aaPredicted RBP16.07■□□□□ 0.16
SIK3-209ENST00000480222 ASAP1Q9ULH1 1129 aa16.07■□□□□ 0.16
SIK3-209ENST00000480222 LY75O60449 1722 aa16.06■□□□□ 0.16
SIK3-209ENST00000480222 PXDNLA1KZ92 1463 aa16.06■□□□□ 0.16
SIK3-209ENST00000480222 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms