RNA–Protein interactions for RNA: ENST00000480191.1

GTF3C6-202, Transcript of general transcription factor IIIC subunit 6, humanhuman

TSL 3

Gene GTF3C6, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-202ENST00000480191 TRIM6-TRIM34B2RNG4 842 aa7.97□□□□□ -1.13
GTF3C6-202ENST00000480191 QPCTQ16769 361 aa7.97□□□□□ -1.13
GTF3C6-202ENST00000480191 PRPF38BQ5VTL8 546 aaKnown RBP7.97□□□□□ -1.13
GTF3C6-202ENST00000480191 PACS2Q86VP3 889 aa7.97□□□□□ -1.13
GTF3C6-202ENST00000480191 KCTD17Q8N5Z5 321 aa7.97□□□□□ -1.13
GTF3C6-202ENST00000480191 MRS2Q9HD23 443 aa7.97□□□□□ -1.13
GTF3C6-202ENST00000480191 PNMA3Q9UL41 463 aa7.97□□□□□ -1.13
GTF3C6-202ENST00000480191 CCDC9Q9Y3X0 531 aaKnown RBP7.97□□□□□ -1.13
GTF3C6-202ENST00000480191 EVC2Q86UK5 1308 aa7.97□□□□□ -1.13
GTF3C6-202ENST00000480191 CSPP1Q1MSJ5 1256 aa7.96□□□□□ -1.14
GTF3C6-202ENST00000480191 THSD4Q6ZMP0 1018 aa7.96□□□□□ -1.14
GTF3C6-202ENST00000480191 KNSTRNQ9Y448 316 aa7.96□□□□□ -1.14
GTF3C6-202ENST00000480191 PARD3Q8TEW0 1356 aa7.96□□□□□ -1.14
GTF3C6-202ENST00000480191 YTHDC2Q9H6S0 1430 aaKnown RBP7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 KNDC1Q76NI1 1749 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 ASXL1Q8IXJ9 1541 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 C3orf80F5H4A9 247 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 AP1G2O75843 785 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 USP17L8P0C7I0 530 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 NDUFV2P19404 249 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 ABL2P42684 1182 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 USP46P62068 366 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 NLRP13Q86W25 1043 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 TRAK1Q9UPV9 953 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 PCDHB15Q9Y5E8 787 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 TMEM2Q9UHN6 1383 aa7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 SETD1AO15047 1707 aaKnown RBP7.95□□□□□ -1.14
GTF3C6-202ENST00000480191 USP32Q8NFA0 1604 aa7.94□□□□□ -1.14
GTF3C6-202ENST00000480191 KDM4AO75164 1064 aa7.94□□□□□ -1.14
GTF3C6-202ENST00000480191 LAPTM4AQ15012 233 aa7.94□□□□□ -1.14
GTF3C6-202ENST00000480191 RTL5Q5HYW3 569 aaPredicted RBP7.94□□□□□ -1.14
GTF3C6-202ENST00000480191 RDH13Q8NBN7 331 aa7.94□□□□□ -1.14
GTF3C6-202ENST00000480191 TMC1Q8TDI8 760 aa7.94□□□□□ -1.14
GTF3C6-202ENST00000480191 CALR3Q96L12 384 aaKnown RBP7.94□□□□□ -1.14
GTF3C6-202ENST00000480191 PANK3Q9H999 370 aa7.94□□□□□ -1.14
GTF3C6-202ENST00000480191 TBC1D2BQ9UPU7 963 aa7.94□□□□□ -1.14
GTF3C6-202ENST00000480191 LRPPRCP42704 1394 aaKnown RBP7.94□□□□□ -1.14
GTF3C6-202ENST00000480191 SLIT1O75093 1534 aa7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 DIP2AQ14689 1571 aa7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 NUTM2BA6NNL0 878 aaPredicted RBP7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 NUTM2EB1AL46 878 aaPredicted RBP7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 PER1O15534 1290 aaPredicted RBP7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 NUTM2DQ5VT03 806 aaPredicted RBP7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 NPM2Q86SE8 214 aaKnown RBP7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 NUTM2AQ8IVF1 878 aaPredicted RBP7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 ZBTB3Q9H5J0 574 aa7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 EID1Q9Y6B2 187 aa7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 INSRP06213 1382 aa7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 ATAD2Q6PL18 1390 aa7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 ABCC11Q96J66 1382 aa7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 PLEKHG1Q9ULL1 1385 aa7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 PTPRMP28827 1452 aa7.93□□□□□ -1.14
GTF3C6-202ENST00000480191 NRXN3Q9Y4C0 1643 aa7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 RIMS1Q86UR5 1692 aaKnown RBP7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 TMEM132EQ6IEE7 984 aa7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 THEMISQ8N1K5 641 aaPredicted RBP7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 RETREG2Q8NC44 543 aa7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 GLMNQ92990 594 aa7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 SIRT1Q96EB6 747 aa7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 POGKQ9P215 609 aa7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 TECPR2O15040 1411 aa7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 FAM135BQ49AJ0 1406 aa7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 ARHGAP23Q9P227 1491 aa7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 ZNF142P52746 1687 aaPredicted RBP7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 ADAMTSL3P82987 1691 aa7.92□□□□□ -1.14
GTF3C6-202ENST00000480191 HOXA2O43364 376 aa7.91□□□□□ -1.14
GTF3C6-202ENST00000480191 GCGRP47871 477 aa7.91□□□□□ -1.14
GTF3C6-202ENST00000480191 HNRNPUQ00839 825 aaKnown RBP eCLIP7.91□□□□□ -1.14
GTF3C6-202ENST00000480191 CABLES1Q8TDN4 633 aa7.91□□□□□ -1.14
GTF3C6-202ENST00000480191 ZNF775Q96BV0 537 aaPredicted RBP7.91□□□□□ -1.14
GTF3C6-202ENST00000480191 VPS9D1Q9Y2B5 631 aa7.91□□□□□ -1.14
GTF3C6-202ENST00000480191 NDUFB9Q9Y6M9 179 aa7.91□□□□□ -1.14
GTF3C6-202ENST00000480191 NSD2O96028 1365 aa7.91□□□□□ -1.14
GTF3C6-202ENST00000480191 CPS1P31327 1500 aa7.91□□□□□ -1.14
GTF3C6-202ENST00000480191 CEP170BQ9Y4F5 1589 aaPredicted RBP7.9□□□□□ -1.14
GTF3C6-202ENST00000480191 TULP4Q9NRJ4 1543 aa7.9□□□□□ -1.14
GTF3C6-202ENST00000480191 POM121CA8CG34 1229 aa7.9□□□□□ -1.14
GTF3C6-202ENST00000480191 GJD4Q96KN9 370 aaPredicted RBP7.9□□□□□ -1.14
GTF3C6-202ENST00000480191 ANKRD36BQ8N2N9 1353 aa7.89□□□□□ -1.15
GTF3C6-202ENST00000480191 CGNL1Q0VF96 1302 aa7.89□□□□□ -1.15
GTF3C6-202ENST00000480191 ZBED9Q6R2W3 1325 aa7.89□□□□□ -1.15
GTF3C6-202ENST00000480191 GFRA3O60609 400 aa7.89□□□□□ -1.15
GTF3C6-202ENST00000480191 FDX1P10109 184 aa7.89□□□□□ -1.15
GTF3C6-202ENST00000480191 PDE4CQ08493 712 aa7.89□□□□□ -1.15
GTF3C6-202ENST00000480191 WASHC4Q2M389 1173 aa7.89□□□□□ -1.15
GTF3C6-202ENST00000480191 FAM9BQ8IZU0 186 aa7.89□□□□□ -1.15
GTF3C6-202ENST00000480191 TERF2IPQ9NYB0 399 aa7.89□□□□□ -1.15
GTF3C6-202ENST00000480191 STK26Q9P289 416 aa7.89□□□□□ -1.15
GTF3C6-202ENST00000480191 SMAPO00193 183 aa7.88□□□□□ -1.15
GTF3C6-202ENST00000480191 ITGBL1O95965 494 aaPredicted RBP7.88□□□□□ -1.15
GTF3C6-202ENST00000480191 PROX2Q3B8N5 592 aa7.88□□□□□ -1.15
GTF3C6-202ENST00000480191 ZNF787Q6DD87 383 aa7.88□□□□□ -1.15
GTF3C6-202ENST00000480191 PRAM1Q96QH2 718 aa7.88□□□□□ -1.15
GTF3C6-202ENST00000480191 PIK3R4Q99570 1358 aa7.87□□□□□ -1.15
GTF3C6-202ENST00000480191 SRPK2P78362 688 aaKnown RBP7.87□□□□□ -1.15
GTF3C6-202ENST00000480191 IRF5Q13568 498 aa7.87□□□□□ -1.15
GTF3C6-202ENST00000480191 CC2D1BQ5T0F9 858 aaKnown RBP7.87□□□□□ -1.15
GTF3C6-202ENST00000480191 TXNDC2Q86VQ3 553 aa7.87□□□□□ -1.15
GTF3C6-202ENST00000480191 PNISRQ8TF01 805 aaKnown RBP7.87□□□□□ -1.15
GTF3C6-202ENST00000480191 KCNK17Q96T54 332 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms