RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 GLI3P10071 1580 aa8.38□□□□□ -1.07
HERC4-210ENST00000480158 RNMTO43148 476 aaKnown RBP8.38□□□□□ -1.07
HERC4-210ENST00000480158 TEFQ10587 303 aa8.38□□□□□ -1.07
HERC4-210ENST00000480158 CCDC27Q2M243 656 aa8.38□□□□□ -1.07
HERC4-210ENST00000480158 NFATC2IPQ8NCF5 419 aa8.38□□□□□ -1.07
HERC4-210ENST00000480158 ZNF521Q96K83 1311 aa8.38□□□□□ -1.07
HERC4-210ENST00000480158 PARP4Q9UKK3 1724 aaKnown RBP8.37□□□□□ -1.07
HERC4-210ENST00000480158 PAXIP1Q6ZW49 1069 aaPredicted RBP8.37□□□□□ -1.07
HERC4-210ENST00000480158 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
HERC4-210ENST00000480158 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.37□□□□□ -1.07
HERC4-210ENST00000480158 CABP4P57796 275 aa8.37□□□□□ -1.07
HERC4-210ENST00000480158 WDR63Q8IWG1 891 aa8.37□□□□□ -1.07
HERC4-210ENST00000480158 NGEFQ8N5V2 710 aa8.37□□□□□ -1.07
HERC4-210ENST00000480158 DLG5Q8TDM6 1919 aa8.36□□□□□ -1.07
HERC4-210ENST00000480158 ELL2O00472 640 aaPredicted RBP8.36□□□□□ -1.07
HERC4-210ENST00000480158 HTATSF1O43719 755 aaKnown RBP8.36□□□□□ -1.07
HERC4-210ENST00000480158 ONECUT3O60422 494 aaPredicted RBP8.36□□□□□ -1.07
HERC4-210ENST00000480158 HSP90AB1P08238 724 aaKnown RBP8.36□□□□□ -1.07
HERC4-210ENST00000480158 PRIM1P49642 420 aaKnown RBP8.36□□□□□ -1.07
HERC4-210ENST00000480158 SLFN5Q08AF3 891 aa8.36□□□□□ -1.07
HERC4-210ENST00000480158 SLC39A6Q13433 755 aa8.36□□□□□ -1.07
HERC4-210ENST00000480158 KDM6AO15550 1401 aaPredicted RBP8.36□□□□□ -1.07
HERC4-210ENST00000480158 TNS2Q63HR2 1409 aa8.36□□□□□ -1.07
HERC4-210ENST00000480158 BTBD11A6QL63 1104 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 MBIPQ9NS73 344 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 TSPYL4Q9UJ04 414 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 LRRC37A3O60309 1634 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 E9PSI1 815 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 KCNQ3O43525 872 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 KCNQ2O43526 872 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 CALD1Q05682 793 aaKnown RBP8.35□□□□□ -1.07
HERC4-210ENST00000480158 TAF7Q15545 349 aaPredicted RBP8.35□□□□□ -1.07
HERC4-210ENST00000480158 KRT24Q2M2I5 525 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 KRT27Q7Z3Y8 459 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 SLC52A2Q9HAB3 445 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 FANCIQ9NVI1 1328 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 PKD1L3Q7Z443 1732 aa8.35□□□□□ -1.07
HERC4-210ENST00000480158 GNAI1P63096 354 aa8.34□□□□□ -1.07
HERC4-210ENST00000480158 NKX1-1Q15270 411 aaPredicted RBP8.34□□□□□ -1.07
HERC4-210ENST00000480158 DUSP27Q5VZP5 1158 aa8.34□□□□□ -1.07
HERC4-210ENST00000480158 PTF1AQ7RTS3 328 aa8.34□□□□□ -1.07
HERC4-210ENST00000480158 MYH16Q9H6N6 1097 aa8.34□□□□□ -1.07
HERC4-210ENST00000480158 TMOD3Q9NYL9 352 aa8.34□□□□□ -1.07
HERC4-210ENST00000480158 CEMIPQ8WUJ3 1361 aa8.34□□□□□ -1.07
HERC4-210ENST00000480158 IFT57Q9NWB7 429 aa8.34□□□□□ -1.07
HERC4-210ENST00000480158 CHL1O00533 1208 aa8.33□□□□□ -1.08
HERC4-210ENST00000480158 CENPBP07199 599 aaPredicted RBP8.33□□□□□ -1.08
HERC4-210ENST00000480158 EXOSC9Q06265 439 aaKnown RBP8.33□□□□□ -1.08
HERC4-210ENST00000480158 PIGBQ92521 554 aa8.33□□□□□ -1.08
HERC4-210ENST00000480158 SHANK3Q9BYB0 1731 aa8.33□□□□□ -1.08
HERC4-210ENST00000480158 WNK3Q9BYP7 1800 aa8.33□□□□□ -1.08
HERC4-210ENST00000480158 ERVV-2B6SEH9 535 aa8.33□□□□□ -1.08
HERC4-210ENST00000480158 TCERG1O14776 1098 aaKnown RBP8.33□□□□□ -1.08
HERC4-210ENST00000480158 PTCD1O75127 700 aaKnown RBP8.33□□□□□ -1.08
HERC4-210ENST00000480158 ZNF853P0CG23 659 aa8.33□□□□□ -1.08
HERC4-210ENST00000480158 ECM2O94769 699 aaPredicted RBP8.32□□□□□ -1.08
HERC4-210ENST00000480158 TSPYL6Q8N831 410 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 C8orf58Q8NAV2 365 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 SPOCK2Q92563 424 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 NECTIN2Q92692 538 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 ASAP1Q9ULH1 1129 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 IL16Q14005 1332 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 KAT6BQ8WYB5 2073 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 RGS12O14924 1447 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 THSD7AQ9UPZ6 1657 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 ZNF790Q6PG37 636 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 TTC5Q8N0Z6 440 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 PLEKHG2Q9H7P9 1386 aa8.32□□□□□ -1.08
HERC4-210ENST00000480158 PRAMEF22A3QJZ6 481 aa8.31□□□□□ -1.08
HERC4-210ENST00000480158 TRIM37O94972 964 aa8.31□□□□□ -1.08
HERC4-210ENST00000480158 TRMT2AQ8IZ69 625 aaKnown RBP8.31□□□□□ -1.08
HERC4-210ENST00000480158 RBM42Q9BTD8 480 aaKnown RBP8.31□□□□□ -1.08
HERC4-210ENST00000480158 BCL2L13Q9BXK5 485 aa8.31□□□□□ -1.08
HERC4-210ENST00000480158 KCNQ4P56696 695 aa8.3□□□□□ -1.08
HERC4-210ENST00000480158 ZNF496Q96IT1 587 aaPredicted RBP8.3□□□□□ -1.08
HERC4-210ENST00000480158 TOGARAM1Q9Y4F4 1720 aa8.3□□□□□ -1.08
HERC4-210ENST00000480158 EIF2S2P20042 333 aaKnown RBP8.3□□□□□ -1.08
HERC4-210ENST00000480158 EIF4A1P60842 406 aaKnown RBP8.3□□□□□ -1.08
HERC4-210ENST00000480158 TWISTNBQ3B726 338 aaPredicted RBP8.3□□□□□ -1.08
HERC4-210ENST00000480158 FAM196AQ6ZSG2 479 aa8.3□□□□□ -1.08
HERC4-210ENST00000480158 ATG3Q9NT62 314 aa8.3□□□□□ -1.08
HERC4-210ENST00000480158 SCN11AQ9UI33 1791 aa8.29□□□□□ -1.08
HERC4-210ENST00000480158 BRWD3Q6RI45 1802 aa8.29□□□□□ -1.08
HERC4-210ENST00000480158 BCL9O00512 1426 aa8.29□□□□□ -1.08
HERC4-210ENST00000480158 DOT1LQ8TEK3 1739 aa8.29□□□□□ -1.08
HERC4-210ENST00000480158 PIP4K2AP48426 406 aaPredicted RBP8.28□□□□□ -1.08
HERC4-210ENST00000480158 KLHL34Q8N239 644 aa8.28□□□□□ -1.08
HERC4-210ENST00000480158 RCAN3Q9UKA8 241 aa8.28□□□□□ -1.08
HERC4-210ENST00000480158 VIRMAQ69YN4 1812 aaKnown RBP8.28□□□□□ -1.08
HERC4-210ENST00000480158 VAMP4O75379 141 aa8.28□□□□□ -1.08
HERC4-210ENST00000480158 BCAR3O75815 825 aa8.28□□□□□ -1.08
HERC4-210ENST00000480158 SPRYD3Q8NCJ5 442 aa8.28□□□□□ -1.08
HERC4-210ENST00000480158 FMNL2Q96PY5 1086 aa8.28□□□□□ -1.08
HERC4-210ENST00000480158 SUPT16HQ9Y5B9 1047 aaKnown RBP8.28□□□□□ -1.08
HERC4-210ENST00000480158 ADAMTS7Q9UKP4 1686 aa8.27□□□□□ -1.09
HERC4-210ENST00000480158 MRC1P22897 1456 aa8.27□□□□□ -1.09
HERC4-210ENST00000480158 GIGYF1O75420 1035 aaPredicted RBP8.27□□□□□ -1.09
HERC4-210ENST00000480158 BABAM1Q9NWV8 329 aa8.27□□□□□ -1.09
HERC4-210ENST00000480158 USP16Q9Y5T5 823 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms