RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 PLEKHM2Q8IWE5 1019 aa9.54□□□□□ -0.88
PBRM1-220ENST00000480064 PIK3CDO00329 1044 aa9.53□□□□□ -0.88
PBRM1-220ENST00000480064 PPFIA3O75145 1194 aa9.53□□□□□ -0.88
PBRM1-220ENST00000480064 TCF3P15923 654 aa9.53□□□□□ -0.88
PBRM1-220ENST00000480064 ZNF16P17020 682 aaPredicted RBP9.53□□□□□ -0.88
PBRM1-220ENST00000480064 SSFA2P28290 1259 aa9.53□□□□□ -0.88
PBRM1-220ENST00000480064 ZNF326Q5BKZ1 582 aaKnown RBP9.53□□□□□ -0.88
PBRM1-220ENST00000480064 ADAM32Q8TC27 787 aa9.53□□□□□ -0.88
PBRM1-220ENST00000480064 FAM200AQ8TCP9 573 aa9.53□□□□□ -0.88
PBRM1-220ENST00000480064 ZNF592Q92610 1267 aa9.53□□□□□ -0.88
PBRM1-220ENST00000480064 KIAA1522Q9P206 1035 aaPredicted RBP9.53□□□□□ -0.88
PBRM1-220ENST00000480064 TTLL8A6PVC2 850 aa9.52□□□□□ -0.89
PBRM1-220ENST00000480064 ZBBXA8MT70 800 aa9.52□□□□□ -0.89
PBRM1-220ENST00000480064 INTS6LQ5JSJ4 861 aaKnown RBP9.52□□□□□ -0.89
PBRM1-220ENST00000480064 ATP5J2-PTCD1G3V325 749 aa9.51□□□□□ -0.89
PBRM1-220ENST00000480064 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
PBRM1-220ENST00000480064 ATP2B4P23634 1241 aa9.51□□□□□ -0.89
PBRM1-220ENST00000480064 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.51□□□□□ -0.89
PBRM1-220ENST00000480064 CLP1Q92989 425 aaKnown RBP9.51□□□□□ -0.89
PBRM1-220ENST00000480064 SPINT1O43278 529 aa9.5□□□□□ -0.89
PBRM1-220ENST00000480064 RASA1P20936 1047 aa9.5□□□□□ -0.89
PBRM1-220ENST00000480064 SERPINB4P48594 390 aa9.5□□□□□ -0.89
PBRM1-220ENST00000480064 PHLDB3Q6NSJ2 640 aa9.5□□□□□ -0.89
PBRM1-220ENST00000480064 DEPDC4Q8N2C3 294 aa9.5□□□□□ -0.89
PBRM1-220ENST00000480064 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
PBRM1-220ENST00000480064 FIGNL2A6NMB9 653 aa9.49□□□□□ -0.89
PBRM1-220ENST00000480064 NBPF20Q3BBV1 942 aa9.49□□□□□ -0.89
PBRM1-220ENST00000480064 SLFNL1Q499Z3 407 aa9.48□□□□□ -0.89
PBRM1-220ENST00000480064 CRTC2Q53ET0 693 aaPredicted RBP9.48□□□□□ -0.89
PBRM1-220ENST00000480064 DZIP3Q86Y13 1208 aaKnown RBP9.48□□□□□ -0.89
PBRM1-220ENST00000480064 PTSQ03393 145 aa9.47□□□□□ -0.89
PBRM1-220ENST00000480064 AGBL1Q96MI9 1066 aa9.47□□□□□ -0.89
PBRM1-220ENST00000480064 CDCA7Q9BWT1 371 aaPredicted RBP9.47□□□□□ -0.89
PBRM1-220ENST00000480064 RAB15P59190 212 aa9.46□□□□□ -0.9
PBRM1-220ENST00000480064 RELBQ01201 579 aa9.46□□□□□ -0.9
PBRM1-220ENST00000480064 NCOA4Q13772 614 aa9.46□□□□□ -0.9
PBRM1-220ENST00000480064 SWI5Q1ZZU3 235 aa9.46□□□□□ -0.9
PBRM1-220ENST00000480064 ANKMY2Q8IV38 441 aa9.46□□□□□ -0.9
PBRM1-220ENST00000480064 TMPRSS4Q9NRS4 437 aa9.46□□□□□ -0.9
PBRM1-220ENST00000480064 ANKRD33BA6NCL7 494 aa9.45□□□□□ -0.9
PBRM1-220ENST00000480064 PTK7Q13308 1070 aa9.45□□□□□ -0.9
PBRM1-220ENST00000480064 RNF135Q8IUD6 432 aa9.45□□□□□ -0.9
PBRM1-220ENST00000480064 LZTS3O60299 673 aaPredicted RBP9.44□□□□□ -0.9
PBRM1-220ENST00000480064 EML3Q32P44 896 aa9.44□□□□□ -0.9
PBRM1-220ENST00000480064 FAM177A1Q8N128 213 aaPredicted RBP9.44□□□□□ -0.9
PBRM1-220ENST00000480064 SREK1Q8WXA9 508 aaKnown RBP9.44□□□□□ -0.9
PBRM1-220ENST00000480064 DRC1Q96MC2 740 aa9.44□□□□□ -0.9
PBRM1-220ENST00000480064 C8orf37Q96NL8 207 aa9.44□□□□□ -0.9
PBRM1-220ENST00000480064 RBM19Q9Y4C8 960 aaKnown RBP9.44□□□□□ -0.9
PBRM1-220ENST00000480064 ERVH48-1M5A8F1 160 aa9.43□□□□□ -0.9
PBRM1-220ENST00000480064 CTSOP43234 321 aaPredicted RBP9.43□□□□□ -0.9
PBRM1-220ENST00000480064 NPAS4Q8IUM7 802 aa9.43□□□□□ -0.9
PBRM1-220ENST00000480064 ZNF784Q8NCA9 323 aaPredicted RBP9.43□□□□□ -0.9
PBRM1-220ENST00000480064 INSM2Q96T92 566 aaPredicted RBP9.43□□□□□ -0.9
PBRM1-220ENST00000480064 ESPNB1AK53 854 aa9.42□□□□□ -0.9
PBRM1-220ENST00000480064 ABL1P00519 1130 aa9.42□□□□□ -0.9
PBRM1-220ENST00000480064 ATP1A2P50993 1020 aa9.42□□□□□ -0.9
PBRM1-220ENST00000480064 TRIM50Q86XT4 487 aa9.42□□□□□ -0.9
PBRM1-220ENST00000480064 CCDC155Q8N6L0 562 aa9.42□□□□□ -0.9
PBRM1-220ENST00000480064 ZNF395Q9H8N7 513 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-220ENST00000480064 POLMQ9NP87 494 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-220ENST00000480064 H3BRB1 525 aa9.41□□□□□ -0.9
PBRM1-220ENST00000480064 LILRA1O75019 489 aa9.41□□□□□ -0.9
PBRM1-220ENST00000480064 ADD1P35611 737 aaKnown RBP9.41□□□□□ -0.9
PBRM1-220ENST00000480064 MCCD1P59942 119 aaPredicted RBP9.41□□□□□ -0.9
PBRM1-220ENST00000480064 DPYDQ12882 1025 aa9.41□□□□□ -0.9
PBRM1-220ENST00000480064 GLYCTKQ8IVS8 523 aa9.41□□□□□ -0.9
PBRM1-220ENST00000480064 GPR161Q8N6U8 529 aaKnown RBP9.41□□□□□ -0.9
PBRM1-220ENST00000480064 PLPP7Q8NBV4 271 aa9.41□□□□□ -0.9
PBRM1-220ENST00000480064 ZNF594Q96JF6 807 aaPredicted RBP9.41□□□□□ -0.9
PBRM1-220ENST00000480064 TUT1Q9H6E5 874 aaKnown RBP9.41□□□□□ -0.9
PBRM1-220ENST00000480064 SLC35F4A4IF30 521 aa9.4□□□□□ -0.9
PBRM1-220ENST00000480064 ADH1AP07327 375 aa9.4□□□□□ -0.9
PBRM1-220ENST00000480064 VAMP1P23763 118 aa9.4□□□□□ -0.9
PBRM1-220ENST00000480064 ZC3H6P61129 1189 aaKnown RBP9.4□□□□□ -0.9
PBRM1-220ENST00000480064 OGFOD1Q8N543 542 aa9.4□□□□□ -0.9
PBRM1-220ENST00000480064 C1orf216Q8TAB5 229 aa9.4□□□□□ -0.9
PBRM1-220ENST00000480064 SLAIN2Q9P270 581 aa9.4□□□□□ -0.9
PBRM1-220ENST00000480064 EGFL7Q9UHF1 273 aa9.4□□□□□ -0.9
PBRM1-220ENST00000480064 PCDHB9Q9Y5E1 797 aa9.4□□□□□ -0.9
PBRM1-220ENST00000480064 CANXP27824 592 aaKnown RBP9.39□□□□□ -0.91
PBRM1-220ENST00000480064 MAPK1P28482 360 aa9.39□□□□□ -0.91
PBRM1-220ENST00000480064 FAM69CQ0P6D2 419 aa9.39□□□□□ -0.91
PBRM1-220ENST00000480064 CCDC125Q86Z20 511 aa9.39□□□□□ -0.91
PBRM1-220ENST00000480064 SEPT12Q8IYM1 358 aa9.39□□□□□ -0.91
PBRM1-220ENST00000480064 NANOS1Q8WY41 292 aaKnown RBP9.39□□□□□ -0.91
PBRM1-220ENST00000480064 PTGIRP43119 386 aa9.38□□□□□ -0.91
PBRM1-220ENST00000480064 SF3A1Q15459 793 aaKnown RBP9.38□□□□□ -0.91
PBRM1-220ENST00000480064 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
PBRM1-220ENST00000480064 NOM1Q5C9Z4 860 aaKnown RBP9.38□□□□□ -0.91
PBRM1-220ENST00000480064 RNF217Q8TC41 542 aa9.38□□□□□ -0.91
PBRM1-220ENST00000480064 DNAAF2Q9NVR5 837 aaKnown RBP9.38□□□□□ -0.91
PBRM1-220ENST00000480064 KRT76Q01546 638 aa9.37□□□□□ -0.91
PBRM1-220ENST00000480064 ZSCAN29Q8IWY8 852 aaPredicted RBP9.37□□□□□ -0.91
PBRM1-220ENST00000480064 KDF1Q8NAX2 398 aaPredicted RBP9.37□□□□□ -0.91
PBRM1-220ENST00000480064 TRIM52Q96A61 297 aa9.37□□□□□ -0.91
PBRM1-220ENST00000480064 CNTNAP3BQ96NU0 1288 aa9.37□□□□□ -0.91
PBRM1-220ENST00000480064 CNTNAP3Q9BZ76 1288 aa9.37□□□□□ -0.91
PBRM1-220ENST00000480064 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
PBRM1-220ENST00000480064 NOD1Q9Y239 953 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms