RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.28
CHD6-208ENST00000480022 COL16A1Q07092 1604 aaPredicted RBP13.33□□□□□ -0.28
CHD6-208ENST00000480022 NPC1L1Q9UHC9 1359 aa13.33□□□□□ -0.28
CHD6-208ENST00000480022 HSPA1LP34931 641 aa13.32□□□□□ -0.28
CHD6-208ENST00000480022 NLRP6P59044 892 aa13.32□□□□□ -0.28
CHD6-208ENST00000480022 JARID2Q92833 1246 aaPredicted RBP13.32□□□□□ -0.28
CHD6-208ENST00000480022 PHLPP1O60346 1717 aa13.32□□□□□ -0.28
CHD6-208ENST00000480022 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
CHD6-208ENST00000480022 TSC1Q92574 1164 aa13.32□□□□□ -0.28
CHD6-208ENST00000480022 NSD2O96028 1365 aa13.32□□□□□ -0.28
CHD6-208ENST00000480022 USP31Q70CQ4 1352 aa13.32□□□□□ -0.28
CHD6-208ENST00000480022 PIK3C2AO00443 1686 aa13.32□□□□□ -0.28
CHD6-208ENST00000480022 MCTP1Q6DN14 999 aa13.31□□□□□ -0.28
CHD6-208ENST00000480022 TNNQ9UQP3 1299 aa13.31□□□□□ -0.28
CHD6-208ENST00000480022 ARHGEF10O15013 1369 aa13.31□□□□□ -0.28
CHD6-208ENST00000480022 CGNQ9P2M7 1197 aaKnown RBP13.31□□□□□ -0.28
CHD6-208ENST00000480022 OVOS2A0A0J9YW53 1432 aa13.31□□□□□ -0.28
CHD6-208ENST00000480022 OVOS2Q6IE36 1432 aa13.31□□□□□ -0.28
CHD6-208ENST00000480022 ALS2Q96Q42 1657 aa13.31□□□□□ -0.28
CHD6-208ENST00000480022 PTMAP06454 111 aaKnown RBP13.31□□□□□ -0.28
CHD6-208ENST00000480022 COG3Q96JB2 828 aa13.31□□□□□ -0.28
CHD6-208ENST00000480022 LMBRD1Q9NUN5 540 aa13.3□□□□□ -0.28
CHD6-208ENST00000480022 KIF3AQ9Y496 699 aa13.3□□□□□ -0.28
CHD6-208ENST00000480022 CD2BP2O95400 341 aaKnown RBP13.3□□□□□ -0.28
CHD6-208ENST00000480022 GAS2L2Q8NHY3 880 aa13.3□□□□□ -0.28
CHD6-208ENST00000480022 PNPLA6Q8IY17 1366 aa13.29□□□□□ -0.28
CHD6-208ENST00000480022 HMGB1P09429 215 aaKnown RBP13.29□□□□□ -0.28
CHD6-208ENST00000480022 KIF2CQ99661 725 aa13.29□□□□□ -0.28
CHD6-208ENST00000480022 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
CHD6-208ENST00000480022 MORC1Q86VD1 984 aa13.29□□□□□ -0.28
CHD6-208ENST00000480022 MVPQ14764 893 aaKnown RBP13.28□□□□□ -0.28
CHD6-208ENST00000480022 LRSAM1Q6UWE0 723 aa13.28□□□□□ -0.28
CHD6-208ENST00000480022 WWC1Q8IX03 1113 aa13.28□□□□□ -0.28
CHD6-208ENST00000480022 PDCL2Q8N4E4 241 aa13.28□□□□□ -0.28
CHD6-208ENST00000480022 CABLES1Q8TDN4 633 aa13.28□□□□□ -0.28
CHD6-208ENST00000480022 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHD6-208ENST00000480022 KIF20BQ96Q89 1820 aa13.27□□□□□ -0.28
CHD6-208ENST00000480022 NUCB2P80303 420 aa13.27□□□□□ -0.28
CHD6-208ENST00000480022 ZNF771Q7L3S4 317 aaPredicted RBP13.27□□□□□ -0.28
CHD6-208ENST00000480022 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.28
CHD6-208ENST00000480022 MED1Q15648 1581 aaPredicted RBP13.27□□□□□ -0.29
CHD6-208ENST00000480022 FBLN1P23142 703 aa13.26□□□□□ -0.29
CHD6-208ENST00000480022 HDAC1Q13547 482 aaPredicted RBP13.26□□□□□ -0.29
CHD6-208ENST00000480022 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
CHD6-208ENST00000480022 AK9Q5TCS8 1911 aa13.26□□□□□ -0.29
CHD6-208ENST00000480022 ZBTB7CA1YPR0 619 aa13.26□□□□□ -0.29
CHD6-208ENST00000480022 SOX12O15370 315 aa13.26□□□□□ -0.29
CHD6-208ENST00000480022 IGSF3O75054 1194 aa13.26□□□□□ -0.29
CHD6-208ENST00000480022 PIBF1Q8WXW3 757 aa13.26□□□□□ -0.29
CHD6-208ENST00000480022 JCADQ9P266 1359 aa13.26□□□□□ -0.29
CHD6-208ENST00000480022 ZBTB22O15209 634 aa13.26□□□□□ -0.29
CHD6-208ENST00000480022 GCP02774 474 aa13.26□□□□□ -0.29
CHD6-208ENST00000480022 BCL2L13Q9BXK5 485 aa13.26□□□□□ -0.29
CHD6-208ENST00000480022 RBM27Q9P2N5 1060 aaKnown RBP13.26□□□□□ -0.29
CHD6-208ENST00000480022 KIF16BQ96L93 1317 aa13.25□□□□□ -0.29
CHD6-208ENST00000480022 USP54Q70EL1 1684 aa13.25□□□□□ -0.29
CHD6-208ENST00000480022 MARF1Q9Y4F3 1742 aaKnown RBP13.25□□□□□ -0.29
CHD6-208ENST00000480022 SLIT3O75094 1523 aa13.25□□□□□ -0.29
CHD6-208ENST00000480022 NOLC1Q14978 699 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHD6-208ENST00000480022 FAM177BA6PVY3 158 aa13.24□□□□□ -0.29
CHD6-208ENST00000480022 KCNH5Q8NCM2 988 aa13.24□□□□□ -0.29
CHD6-208ENST00000480022 SYCE3A1L190 88 aa13.24□□□□□ -0.29
CHD6-208ENST00000480022 GPT2Q8TD30 523 aa13.24□□□□□ -0.29
CHD6-208ENST00000480022 COL22A1Q8NFW1 1626 aaPredicted RBP13.23□□□□□ -0.29
CHD6-208ENST00000480022 FTSJ3Q8IY81 847 aaKnown RBP13.23□□□□□ -0.29
CHD6-208ENST00000480022 FEZ1Q99689 392 aa13.23□□□□□ -0.29
CHD6-208ENST00000480022 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
CHD6-208ENST00000480022 ANKRD26Q9UPS8 1709 aa13.23□□□□□ -0.29
CHD6-208ENST00000480022 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
CHD6-208ENST00000480022 PRPF40AO75400 957 aaKnown RBP13.23□□□□□ -0.29
CHD6-208ENST00000480022 CYP2E1P05181 493 aaPredicted RBP13.23□□□□□ -0.29
CHD6-208ENST00000480022 U2AF2P26368 475 aaKnown RBP eCLIP13.23□□□□□ -0.295e-12■■■□□ 15.3
CHD6-208ENST00000480022 CCDC9Q9Y3X0 531 aaKnown RBP13.23□□□□□ -0.29
CHD6-208ENST00000480022 NFAT5O94916 1531 aa13.23□□□□□ -0.29
CHD6-208ENST00000480022 RRS1Q15050 365 aaKnown RBP13.22□□□□□ -0.29
CHD6-208ENST00000480022 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
CHD6-208ENST00000480022 DZIP1LQ8IYY4 767 aaKnown RBP13.22□□□□□ -0.29
CHD6-208ENST00000480022 RNF214Q8ND24 703 aa13.22□□□□□ -0.29
CHD6-208ENST00000480022 TMEM63CQ9P1W3 806 aa13.22□□□□□ -0.29
CHD6-208ENST00000480022 CRYBG1Q9Y4K1 1723 aa13.22□□□□□ -0.29
CHD6-208ENST00000480022 ZC3H6P61129 1189 aaKnown RBP13.21□□□□□ -0.29
CHD6-208ENST00000480022 GABPB1Q06547 395 aaPredicted RBP13.21□□□□□ -0.29
CHD6-208ENST00000480022 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
CHD6-208ENST00000480022 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.29
CHD6-208ENST00000480022 SHPRHQ149N8 1683 aa13.21□□□□□ -0.29
CHD6-208ENST00000480022 PHRF1Q9P1Y6 1649 aaKnown RBP13.21□□□□□ -0.29
CHD6-208ENST00000480022 FKBP5Q13451 457 aaPredicted RBP13.21□□□□□ -0.29
CHD6-208ENST00000480022 ANKRD7Q92527 254 aa13.21□□□□□ -0.29
CHD6-208ENST00000480022 OGFRQ9NZT2 677 aa13.21□□□□□ -0.29
CHD6-208ENST00000480022 POLKQ9UBT6 870 aa13.21□□□□□ -0.29
CHD6-208ENST00000480022 MAP3K19Q56UN5 1328 aa13.21□□□□□ -0.3
CHD6-208ENST00000480022 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.3
CHD6-208ENST00000480022 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.3
CHD6-208ENST00000480022 NUTM2AQ8IVF1 878 aaPredicted RBP13.21□□□□□ -0.3
CHD6-208ENST00000480022 TEX2Q8IWB9 1127 aa13.21□□□□□ -0.3
CHD6-208ENST00000480022 EMILIN1Q9Y6C2 1016 aa13.21□□□□□ -0.3
CHD6-208ENST00000480022 SPATA31A6Q5VVP1 1343 aa13.2□□□□□ -0.3
CHD6-208ENST00000480022 KCNJ4P48050 445 aa13.2□□□□□ -0.3
CHD6-208ENST00000480022 SLC20A2Q08357 652 aa13.2□□□□□ -0.3
CHD6-208ENST00000480022 BMP2KLQ5H9B9 411 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms