RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 PSME1Q06323 249 aa23.63■■□□□ 1.37
TNFRSF8-204ENST00000479933 CASC1Q6TDU7 716 aa23.63■■□□□ 1.37
TNFRSF8-204ENST00000479933 KIF2CQ99661 725 aa23.62■■□□□ 1.37
TNFRSF8-204ENST00000479933 F6X3S4 739 aa23.62■■□□□ 1.37
TNFRSF8-204ENST00000479933 SPRYD3Q8NCJ5 442 aa23.62■■□□□ 1.37
TNFRSF8-204ENST00000479933 CIZ1Q9ULV3 898 aaPredicted RBP23.62■■□□□ 1.37
TNFRSF8-204ENST00000479933 FKBP5Q13451 457 aaPredicted RBP23.61■■□□□ 1.37
TNFRSF8-204ENST00000479933 CEMIPQ8WUJ3 1361 aa23.6■■□□□ 1.37
TNFRSF8-204ENST00000479933 HSP90AB1P08238 724 aaKnown RBP23.6■■□□□ 1.37
TNFRSF8-204ENST00000479933 ESCO1Q5FWF5 840 aa23.6■■□□□ 1.37
TNFRSF8-204ENST00000479933 C16orf71Q8IYS4 520 aaPredicted RBP23.6■■□□□ 1.37
TNFRSF8-204ENST00000479933 NPHP4O75161 1426 aaPredicted RBP23.59■■□□□ 1.37
TNFRSF8-204ENST00000479933 XRCC6P12956 609 aaKnown RBP eCLIP23.59■■□□□ 1.37
TNFRSF8-204ENST00000479933 MED1Q15648 1581 aaPredicted RBP23.59■■□□□ 1.37
TNFRSF8-204ENST00000479933 GOLGA6L3A6NEY3 463 aa23.59■■□□□ 1.37
TNFRSF8-204ENST00000479933 MCM4P33991 863 aa23.59■■□□□ 1.37
TNFRSF8-204ENST00000479933 DDIT3P35638 169 aa23.59■■□□□ 1.37
TNFRSF8-204ENST00000479933 OSBPL3Q9H4L5 887 aa23.58■■□□□ 1.37
TNFRSF8-204ENST00000479933 HOXB7P09629 217 aa23.57■■□□□ 1.36
TNFRSF8-204ENST00000479933 LMO7Q8WWI1 1683 aa23.57■■□□□ 1.36
TNFRSF8-204ENST00000479933 KDM3BQ7LBC6 1761 aa23.55■■□□□ 1.36
TNFRSF8-204ENST00000479933 K7ELQ4 463 aaPredicted RBP23.55■■□□□ 1.36
TNFRSF8-204ENST00000479933 SMARCA5O60264 1052 aaPredicted RBP23.55■■□□□ 1.36
TNFRSF8-204ENST00000479933 SDSP20132 328 aa23.55■■□□□ 1.36
TNFRSF8-204ENST00000479933 USHBP1Q8N6Y0 703 aa23.55■■□□□ 1.36
TNFRSF8-204ENST00000479933 PODXL2Q9NZ53 605 aa23.55■■□□□ 1.36
TNFRSF8-204ENST00000479933 TPM2P07951 284 aa23.54■■□□□ 1.36
TNFRSF8-204ENST00000479933 ATP8B2P98198 1209 aa23.54■■□□□ 1.36
TNFRSF8-204ENST00000479933 RABEP1Q15276 862 aa23.54■■□□□ 1.36
TNFRSF8-204ENST00000479933 NBPF6Q5VWK0 638 aa23.54■■□□□ 1.36
TNFRSF8-204ENST00000479933 OTUD7AQ8TE49 926 aaPredicted RBP23.54■■□□□ 1.36
TNFRSF8-204ENST00000479933 NBPF4Q96M43 638 aa23.54■■□□□ 1.36
TNFRSF8-204ENST00000479933 SLIT3O75094 1523 aa23.54■■□□□ 1.36
TNFRSF8-204ENST00000479933 HDGFL1Q5TGJ6 251 aa23.54■■□□□ 1.36
TNFRSF8-204ENST00000479933 APBB1O00213 710 aa23.53■■□□□ 1.36
TNFRSF8-204ENST00000479933 ISY1Q9ULR0 285 aaKnown RBP23.53■■□□□ 1.36
TNFRSF8-204ENST00000479933 DDX11L8A8MPP1 907 aa23.53■■□□□ 1.36
TNFRSF8-204ENST00000479933 USP26Q9BXU7 913 aa23.53■■□□□ 1.36
TNFRSF8-204ENST00000479933 REC8O95072 547 aa23.52■■□□□ 1.36
TNFRSF8-204ENST00000479933 AMOTQ4VCS5 1084 aa23.52■■□□□ 1.36
TNFRSF8-204ENST00000479933 PLEKHO1Q53GL0 409 aaPredicted RBP23.52■■□□□ 1.36
TNFRSF8-204ENST00000479933 NCAPD2Q15021 1401 aa23.52■■□□□ 1.36
TNFRSF8-204ENST00000479933 AKAP4Q5JQC9 854 aa23.51■■□□□ 1.35
TNFRSF8-204ENST00000479933 LRRCC1Q9C099 1032 aa23.51■■□□□ 1.35
TNFRSF8-204ENST00000479933 OVOS2A0A0G2JMS6 1433 aa23.51■■□□□ 1.35
TNFRSF8-204ENST00000479933 PDE1AP54750 535 aa23.51■■□□□ 1.35
TNFRSF8-204ENST00000479933 NECTIN2Q92692 538 aa23.51■■□□□ 1.35
TNFRSF8-204ENST00000479933 RGPD2P0DJD1 1756 aa23.51■■□□□ 1.35
TNFRSF8-204ENST00000479933 RBM33Q96EV2 1170 aaKnown RBP23.5■■□□□ 1.35
TNFRSF8-204ENST00000479933 EIF4A1P60842 406 aaKnown RBP23.5■■□□□ 1.35
TNFRSF8-204ENST00000479933 PDCL3Q9H2J4 239 aa23.5■■□□□ 1.35
TNFRSF8-204ENST00000479933 KIF1AQ12756 1690 aa23.49■■□□□ 1.35
TNFRSF8-204ENST00000479933 MRE11P49959 708 aa23.49■■□□□ 1.35
TNFRSF8-204ENST00000479933 IBTKQ9P2D0 1353 aaPredicted RBP23.48■■□□□ 1.35
TNFRSF8-204ENST00000479933 ARHGEF25Q86VW2 580 aa23.48■■□□□ 1.35
TNFRSF8-204ENST00000479933 GCP02774 474 aa23.48■■□□□ 1.35
TNFRSF8-204ENST00000479933 UBTFL1P0CB47 393 aaPredicted RBP23.48■■□□□ 1.35
TNFRSF8-204ENST00000479933 PTMSP20962 102 aa23.48■■□□□ 1.35
TNFRSF8-204ENST00000479933 TEFQ10587 303 aa23.47■■□□□ 1.35
TNFRSF8-204ENST00000479933 ZNF530Q6P9A1 599 aaPredicted RBP23.47■■□□□ 1.35
TNFRSF8-204ENST00000479933 SRCIN1Q9C0H9 1055 aa23.47■■□□□ 1.35
TNFRSF8-204ENST00000479933 TRPM3Q9HCF6 1732 aaPredicted RBP23.47■■□□□ 1.35
TNFRSF8-204ENST00000479933 CAMTA1Q9Y6Y1 1673 aa23.47■■□□□ 1.35
TNFRSF8-204ENST00000479933 ERC2O15083 957 aa23.47■■□□□ 1.35
TNFRSF8-204ENST00000479933 GBP4Q96PP9 640 aa23.47■■□□□ 1.35
TNFRSF8-204ENST00000479933 USP44Q9H0E7 712 aa23.47■■□□□ 1.35
TNFRSF8-204ENST00000479933 EXOC6BQ9Y2D4 811 aa23.47■■□□□ 1.35
TNFRSF8-204ENST00000479933 SALL3Q9BXA9 1300 aa23.46■■□□□ 1.35
TNFRSF8-204ENST00000479933 TUBGCP6Q96RT7 1819 aa23.46■■□□□ 1.35
TNFRSF8-204ENST00000479933 ZBTB7CA1YPR0 619 aa23.46■■□□□ 1.35
TNFRSF8-204ENST00000479933 RAB3GAP1Q15042 981 aa23.46■■□□□ 1.35
TNFRSF8-204ENST00000479933 LRRFIP2Q9Y608 721 aaKnown RBP23.46■■□□□ 1.35
TNFRSF8-204ENST00000479933 CD2BP2O95400 341 aaKnown RBP23.45■■□□□ 1.35
TNFRSF8-204ENST00000479933 RBM42Q9BTD8 480 aaKnown RBP23.45■■□□□ 1.35
TNFRSF8-204ENST00000479933 LGR6Q9HBX8 967 aa23.45■■□□□ 1.35
TNFRSF8-204ENST00000479933 LMTK3Q96Q04 1460 aa23.44■■□□□ 1.34
TNFRSF8-204ENST00000479933 PNMA6EA0A0J9YXQ4 647 aa23.44■■□□□ 1.34
TNFRSF8-204ENST00000479933 C1orf141Q5JVX7 400 aa23.44■■□□□ 1.34
TNFRSF8-204ENST00000479933 ORAI2Q96SN7 254 aa23.44■■□□□ 1.34
TNFRSF8-204ENST00000479933 AOX1Q06278 1338 aa23.44■■□□□ 1.34
TNFRSF8-204ENST00000479933 MST1RQ04912 1400 aa23.44■■□□□ 1.34
TNFRSF8-204ENST00000479933 ESPNB1AK53 854 aa23.44■■□□□ 1.34
TNFRSF8-204ENST00000479933 TRAK2O60296 914 aa23.44■■□□□ 1.34
TNFRSF8-204ENST00000479933 MX1P20591 662 aa23.44■■□□□ 1.34
TNFRSF8-204ENST00000479933 STAP2Q9UGK3 403 aa23.44■■□□□ 1.34
TNFRSF8-204ENST00000479933 SSH3Q8TE77 659 aa23.43■■□□□ 1.34
TNFRSF8-204ENST00000479933 PHAXQ9H814 394 aaKnown RBP23.43■■□□□ 1.34
TNFRSF8-204ENST00000479933 BTBD11A6QL63 1104 aa23.42■■□□□ 1.34
TNFRSF8-204ENST00000479933 RAB11FIP3O75154 756 aa23.42■■□□□ 1.34
TNFRSF8-204ENST00000479933 TNPO1Q92973 898 aaKnown RBP23.42■■□□□ 1.34
TNFRSF8-204ENST00000479933 LRRC59Q96AG4 307 aaKnown RBP23.42■■□□□ 1.34
TNFRSF8-204ENST00000479933 PANK2Q9BZ23 570 aa23.42■■□□□ 1.34
TNFRSF8-204ENST00000479933 ST18O60284 1047 aa23.41■■□□□ 1.34
TNFRSF8-204ENST00000479933 EIF2S2P20042 333 aaKnown RBP23.41■■□□□ 1.34
TNFRSF8-204ENST00000479933 ANKRD24Q8TF21 1146 aa23.41■■□□□ 1.34
TNFRSF8-204ENST00000479933 RNMTO43148 476 aaKnown RBP23.41■■□□□ 1.34
TNFRSF8-204ENST00000479933 PROSER2Q86WR7 435 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF8-204ENST00000479933 DNAAF4Q8WXU2 420 aa23.4■■□□□ 1.34
TNFRSF8-204ENST00000479933 KRT28Q7Z3Y7 464 aa23.39■■□□□ 1.34
TNFRSF8-204ENST00000479933 CHPF2Q9P2E5 772 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms