RNA–Protein interactions for RNA: ENST00000479820.1

SEMA6C-206, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-206ENST00000479820 MRC1P22897 1456 aa20.71■□□□□ 0.91
SEMA6C-206ENST00000479820 SULT6B1Q6IMI4 303 aa20.71■□□□□ 0.91
SEMA6C-206ENST00000479820 ZNF530Q6P9A1 599 aaPredicted RBP20.71■□□□□ 0.91
SEMA6C-206ENST00000479820 FLAD1Q8NFF5 587 aa20.71■□□□□ 0.91
SEMA6C-206ENST00000479820 GOLGB1Q14789 3259 aaKnown RBP20.7■□□□□ 0.9
SEMA6C-206ENST00000479820 POLD1P28340 1107 aa20.7■□□□□ 0.9
SEMA6C-206ENST00000479820 ATG3Q9NT62 314 aa20.7■□□□□ 0.9
SEMA6C-206ENST00000479820 AMIGO3Q86WK7 504 aa20.69■□□□□ 0.9
SEMA6C-206ENST00000479820 LINC00116Q8NCU8 138 aa20.69■□□□□ 0.9
SEMA6C-206ENST00000479820 C4AP0C0L4 1744 aa20.69■□□□□ 0.9
SEMA6C-206ENST00000479820 ITPK1Q13572 414 aa20.68■□□□□ 0.9
SEMA6C-206ENST00000479820 CC2D1BQ5T0F9 858 aaKnown RBP20.68■□□□□ 0.9
SEMA6C-206ENST00000479820 DCAF8L1A6NGE4 600 aa20.67■□□□□ 0.9
SEMA6C-206ENST00000479820 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
SEMA6C-206ENST00000479820 UBR2Q8IWV8 1755 aa20.67■□□□□ 0.9
SEMA6C-206ENST00000479820 SSFA2P28290 1259 aa20.66■□□□□ 0.9
SEMA6C-206ENST00000479820 AK7Q96M32 723 aa20.66■□□□□ 0.9
SEMA6C-206ENST00000479820 KIF13BQ9NQT8 1826 aa20.66■□□□□ 0.9
SEMA6C-206ENST00000479820 SLC4A9Q96Q91 983 aa20.65■□□□□ 0.9
SEMA6C-206ENST00000479820 ATP6V1AP38606 617 aa20.64■□□□□ 0.89
SEMA6C-206ENST00000479820 C1orf141Q5JVX7 400 aa20.64■□□□□ 0.89
SEMA6C-206ENST00000479820 DIAPH1O60610 1272 aaKnown RBP20.63■□□□□ 0.89
SEMA6C-206ENST00000479820 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.62■□□□□ 0.89
SEMA6C-206ENST00000479820 MSH5O43196 834 aa20.62■□□□□ 0.89
SEMA6C-206ENST00000479820 YY1P25490 414 aa20.62■□□□□ 0.89
SEMA6C-206ENST00000479820 AKAP4Q5JQC9 854 aa20.62■□□□□ 0.89
SEMA6C-206ENST00000479820 CABP4P57796 275 aa20.61■□□□□ 0.89
SEMA6C-206ENST00000479820 MSL1Q68DK7 614 aa20.61■□□□□ 0.89
SEMA6C-206ENST00000479820 CNTNAP4Q9C0A0 1308 aa20.6■□□□□ 0.89
SEMA6C-206ENST00000479820 RC3H1Q5TC82 1133 aaKnown RBP20.6■□□□□ 0.89
SEMA6C-206ENST00000479820 KIAA1551Q9HCM1 1747 aa20.6■□□□□ 0.89
SEMA6C-206ENST00000479820 KCPQ6ZWJ8 1503 aa20.59■□□□□ 0.89
SEMA6C-206ENST00000479820 GNPATO15228 680 aa20.59■□□□□ 0.89
SEMA6C-206ENST00000479820 HMOX1P09601 288 aa20.59■□□□□ 0.89
SEMA6C-206ENST00000479820 NLGN2Q8NFZ4 835 aa20.59■□□□□ 0.89
SEMA6C-206ENST00000479820 SMIM5Q71RC9 77 aa20.58■□□□□ 0.89
SEMA6C-206ENST00000479820 NFATC2IPQ8NCF5 419 aa20.58■□□□□ 0.89
SEMA6C-206ENST00000479820 PHF14O94880 888 aa20.57■□□□□ 0.88
SEMA6C-206ENST00000479820 ADRA2BP18089 450 aa20.56■□□□□ 0.88
SEMA6C-206ENST00000479820 MTHFSDQ2M296 383 aaKnown RBP20.56■□□□□ 0.88
SEMA6C-206ENST00000479820 RBM42Q9BTD8 480 aaKnown RBP20.56■□□□□ 0.88
SEMA6C-206ENST00000479820 SLC52A2Q9HAB3 445 aa20.56■□□□□ 0.88
SEMA6C-206ENST00000479820 CD2APQ9Y5K6 639 aa20.56■□□□□ 0.88
SEMA6C-206ENST00000479820 RNMTO43148 476 aaKnown RBP20.55■□□□□ 0.88
SEMA6C-206ENST00000479820 BRCA1P38398 1863 aaKnown RBP20.55■□□□□ 0.88
SEMA6C-206ENST00000479820 KLHL34Q8N239 644 aa20.54■□□□□ 0.88
SEMA6C-206ENST00000479820 LGR6Q9HBX8 967 aa20.54■□□□□ 0.88
SEMA6C-206ENST00000479820 RTCBQ9Y3I0 505 aaKnown RBP20.53■□□□□ 0.88
SEMA6C-206ENST00000479820 RPS6KA4O75676 772 aa20.52■□□□□ 0.88
SEMA6C-206ENST00000479820 PTCD1O75127 700 aaKnown RBP20.51■□□□□ 0.87
SEMA6C-206ENST00000479820 N4BP2Q86UW6 1770 aaPredicted RBP20.51■□□□□ 0.87
SEMA6C-206ENST00000479820 PPP2R1AP30153 589 aa20.5■□□□□ 0.87
SEMA6C-206ENST00000479820 GPR162Q16538 588 aa20.5■□□□□ 0.87
SEMA6C-206ENST00000479820 TRAPPC3LQ5T215 181 aa20.5■□□□□ 0.87
SEMA6C-206ENST00000479820 DLG5Q8TDM6 1919 aa20.5■□□□□ 0.87
SEMA6C-206ENST00000479820 YBX3P16989 372 aaKnown RBP eCLIP20.49■□□□□ 0.87
SEMA6C-206ENST00000479820 CRKLP46109 303 aaKnown RBP20.49■□□□□ 0.87
SEMA6C-206ENST00000479820 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
SEMA6C-206ENST00000479820 CEMIPQ8WUJ3 1361 aa20.48■□□□□ 0.87
SEMA6C-206ENST00000479820 C10orf71Q711Q0 1435 aa20.48■□□□□ 0.87
SEMA6C-206ENST00000479820 U2SURPO15042 1029 aaKnown RBP20.48■□□□□ 0.87
SEMA6C-206ENST00000479820 CNGB1Q14028 1251 aaPredicted RBP20.48■□□□□ 0.87
SEMA6C-206ENST00000479820 GAS2L2Q8NHY3 880 aa20.48■□□□□ 0.87
SEMA6C-206ENST00000479820 CFAP53Q96M91 514 aa20.48■□□□□ 0.87
SEMA6C-206ENST00000479820 RSPH6AQ9H0K4 717 aa20.48■□□□□ 0.87
SEMA6C-206ENST00000479820 AFDNP55196 1824 aaKnown RBP20.46■□□□□ 0.87
SEMA6C-206ENST00000479820 GYS1P13807 737 aa20.46■□□□□ 0.87
SEMA6C-206ENST00000479820 NRXN2Q9P2S2 1712 aa20.46■□□□□ 0.87
SEMA6C-206ENST00000479820 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
SEMA6C-206ENST00000479820 MMP10P09238 476 aa20.45■□□□□ 0.86
SEMA6C-206ENST00000479820 SLC39A6Q13433 755 aa20.45■□□□□ 0.86
SEMA6C-206ENST00000479820 INTS5Q6P9B9 1019 aaKnown RBP20.45■□□□□ 0.86
SEMA6C-206ENST00000479820 VSIG10Q8N0Z9 540 aa20.45■□□□□ 0.86
SEMA6C-206ENST00000479820 NLGN1Q8N2Q7 840 aa20.45■□□□□ 0.86
SEMA6C-206ENST00000479820 ZNF784Q8NCA9 323 aaPredicted RBP20.45■□□□□ 0.86
SEMA6C-206ENST00000479820 PXDNLA1KZ92 1463 aa20.44■□□□□ 0.86
SEMA6C-206ENST00000479820 GNAT3A8MTJ3 354 aa20.44■□□□□ 0.86
SEMA6C-206ENST00000479820 GRIN3BO60391 1043 aa20.44■□□□□ 0.86
SEMA6C-206ENST00000479820 DNAJC10Q8IXB1 793 aa20.44■□□□□ 0.86
SEMA6C-206ENST00000479820 IL17REQ8NFR9 667 aa20.44■□□□□ 0.86
SEMA6C-206ENST00000479820 USP42Q9H9J4 1324 aaKnown RBP20.44■□□□□ 0.86
SEMA6C-206ENST00000479820 SCN7AQ01118 1682 aa20.44■□□□□ 0.86
SEMA6C-206ENST00000479820 CYP19A1P11511 503 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-206ENST00000479820 PRKAR2BP31323 418 aa20.43■□□□□ 0.86
SEMA6C-206ENST00000479820 RFC4P35249 363 aa20.43■□□□□ 0.86
SEMA6C-206ENST00000479820 PHACTR3Q96KR7 559 aa20.43■□□□□ 0.86
SEMA6C-206ENST00000479820 SOS1Q07889 1333 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-206ENST00000479820 CCDC87Q9NVE4 849 aa20.42■□□□□ 0.86
SEMA6C-206ENST00000479820 NUDCQ9Y266 331 aa20.42■□□□□ 0.86
SEMA6C-206ENST00000479820 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
SEMA6C-206ENST00000479820 DLEC1Q9Y238 1755 aa20.41■□□□□ 0.86
SEMA6C-206ENST00000479820 FCHSD2O94868 740 aa20.4■□□□□ 0.86
SEMA6C-206ENST00000479820 BCORQ6W2J9 1755 aa20.4■□□□□ 0.86
SEMA6C-206ENST00000479820 COL15A1P39059 1388 aa20.39■□□□□ 0.85
SEMA6C-206ENST00000479820 SRP68Q9UHB9 627 aaKnown RBP20.39■□□□□ 0.85
SEMA6C-206ENST00000479820 KDM3BQ7LBC6 1761 aa20.39■□□□□ 0.85
SEMA6C-206ENST00000479820 HEG1Q9ULI3 1381 aa20.38■□□□□ 0.85
SEMA6C-206ENST00000479820 TEFQ10587 303 aa20.38■□□□□ 0.85
SEMA6C-206ENST00000479820 ZNF790Q6PG37 636 aa20.38■□□□□ 0.85
SEMA6C-206ENST00000479820 LAMB4A4D0S4 1761 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms