RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 EXOSC9Q06265 439 aaKnown RBP18.35■□□□□ 0.53
RPP40-205ENST00000479782 RCAN3Q9UKA8 241 aa18.35■□□□□ 0.53
RPP40-205ENST00000479782 BTBD11A6QL63 1104 aa18.34■□□□□ 0.53
RPP40-205ENST00000479782 CABP4P57796 275 aa18.33■□□□□ 0.52
RPP40-205ENST00000479782 DOT1LQ8TEK3 1739 aa18.32■□□□□ 0.52
RPP40-205ENST00000479782 PAPPAQ13219 1627 aa18.32■□□□□ 0.52
RPP40-205ENST00000479782 A0A0G2JS52 829 aa18.32■□□□□ 0.52
RPP40-205ENST00000479782 MYT1Q01538 1121 aa18.32■□□□□ 0.52
RPP40-205ENST00000479782 NFATC2IPQ8NCF5 419 aa18.32■□□□□ 0.52
RPP40-205ENST00000479782 ZNF428Q96B54 188 aa18.32■□□□□ 0.52
RPP40-205ENST00000479782 MIS18AQ9NYP9 233 aa18.32■□□□□ 0.52
RPP40-205ENST00000479782 ITGB4P16144 1822 aa18.32■□□□□ 0.52
RPP40-205ENST00000479782 SOS1Q07889 1333 aaPredicted RBP18.31■□□□□ 0.52
RPP40-205ENST00000479782 RBM6P78332 1123 aaKnown RBP18.31■□□□□ 0.52
RPP40-205ENST00000479782 MARCH10Q8NA82 808 aaPredicted RBP18.31■□□□□ 0.52
RPP40-205ENST00000479782 TWISTNBQ3B726 338 aaPredicted RBP18.29■□□□□ 0.52
RPP40-205ENST00000479782 SEPT12Q8IYM1 358 aa18.29■□□□□ 0.52
RPP40-205ENST00000479782 TMOD3Q9NYL9 352 aa18.29■□□□□ 0.52
RPP40-205ENST00000479782 UBR2Q8IWV8 1755 aa18.28■□□□□ 0.52
RPP40-205ENST00000479782 ZNF790Q6PG37 636 aa18.28■□□□□ 0.52
RPP40-205ENST00000479782 C8orf58Q8NAV2 365 aa18.28■□□□□ 0.52
RPP40-205ENST00000479782 SUPT16HQ9Y5B9 1047 aaKnown RBP18.28■□□□□ 0.52
RPP40-205ENST00000479782 BCL9O00512 1426 aa18.28■□□□□ 0.52
RPP40-205ENST00000479782 VAMP4O75379 141 aa18.27■□□□□ 0.52
RPP40-205ENST00000479782 EIF4A1P60842 406 aaKnown RBP18.27■□□□□ 0.52
RPP40-205ENST00000479782 TTC5Q8N0Z6 440 aa18.27■□□□□ 0.52
RPP40-205ENST00000479782 RNF123Q5XPI4 1314 aa18.26■□□□□ 0.51
RPP40-205ENST00000479782 HOXB7P09629 217 aa18.26■□□□□ 0.51
RPP40-205ENST00000479782 RARSP54136 660 aaKnown RBP18.26■□□□□ 0.51
RPP40-205ENST00000479782 ALDH1L2Q3SY69 923 aa18.26■□□□□ 0.51
RPP40-205ENST00000479782 TSPYL6Q8N831 410 aa18.26■□□□□ 0.51
RPP40-205ENST00000479782 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
RPP40-205ENST00000479782 HEG1Q9ULI3 1381 aa18.26■□□□□ 0.51
RPP40-205ENST00000479782 PIAS4Q8N2W9 510 aaPredicted RBP18.25■□□□□ 0.51
RPP40-205ENST00000479782 BRWD3Q6RI45 1802 aa18.24■□□□□ 0.51
RPP40-205ENST00000479782 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
RPP40-205ENST00000479782 KCNQ3O43525 872 aa18.24■□□□□ 0.51
RPP40-205ENST00000479782 RXRBP28702 533 aa18.24■□□□□ 0.51
RPP40-205ENST00000479782 KRT24Q2M2I5 525 aa18.24■□□□□ 0.51
RPP40-205ENST00000479782 NHSQ6T4R5 1651 aa18.24■□□□□ 0.51
RPP40-205ENST00000479782 SLC39A6Q13433 755 aa18.23■□□□□ 0.51
RPP40-205ENST00000479782 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.23■□□□□ 0.51
RPP40-205ENST00000479782 PIGBQ92521 554 aa18.23■□□□□ 0.51
RPP40-205ENST00000479782 RGS17Q9UGC6 210 aaPredicted RBP18.23■□□□□ 0.51
RPP40-205ENST00000479782 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
RPP40-205ENST00000479782 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
RPP40-205ENST00000479782 RRP1P56182 461 aaKnown RBP18.22■□□□□ 0.51
RPP40-205ENST00000479782 FMNL2Q96PY5 1086 aa18.22■□□□□ 0.51
RPP40-205ENST00000479782 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
RPP40-205ENST00000479782 BRPF1P55201 1214 aaPredicted RBP18.21■□□□□ 0.51
RPP40-205ENST00000479782 ILDR1Q86SU0 546 aaPredicted RBP18.21■□□□□ 0.51
RPP40-205ENST00000479782 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
RPP40-205ENST00000479782 SYTL4Q96C24 671 aaPredicted RBP18.21■□□□□ 0.51
RPP40-205ENST00000479782 SMC4Q9NTJ3 1288 aa18.21■□□□□ 0.51
RPP40-205ENST00000479782 C5P01031 1676 aa18.21■□□□□ 0.51
RPP40-205ENST00000479782 GIGYF1O75420 1035 aaPredicted RBP18.2■□□□□ 0.5
RPP40-205ENST00000479782 BCAR3O75815 825 aa18.2■□□□□ 0.5
RPP40-205ENST00000479782 KRT27Q7Z3Y8 459 aa18.2■□□□□ 0.5
RPP40-205ENST00000479782 ZNF496Q96IT1 587 aaPredicted RBP18.2■□□□□ 0.5
RPP40-205ENST00000479782 SBF2Q86WG5 1849 aa18.2■□□□□ 0.5
RPP40-205ENST00000479782 KIF16BQ96L93 1317 aa18.2■□□□□ 0.5
RPP40-205ENST00000479782 NEFLP07196 543 aa18.19■□□□□ 0.5
RPP40-205ENST00000479782 CCDC30Q5VVM6 783 aa18.19■□□□□ 0.5
RPP40-205ENST00000479782 ACSBG1Q96GR2 724 aa18.19■□□□□ 0.5
RPP40-205ENST00000479782 RGS12O14924 1447 aa18.18■□□□□ 0.5
RPP40-205ENST00000479782 SNRPA1P09661 255 aaKnown RBP18.18■□□□□ 0.5
RPP40-205ENST00000479782 POTEAQ6S8J7 498 aa18.18■□□□□ 0.5
RPP40-205ENST00000479782 CACNA1FO60840 1977 aa18.18■□□□□ 0.5
RPP40-205ENST00000479782 HDGFL1Q5TGJ6 251 aa18.17■□□□□ 0.5
RPP40-205ENST00000479782 FAM196AQ6ZSG2 479 aa18.17■□□□□ 0.5
RPP40-205ENST00000479782 VSIG10Q8N0Z9 540 aa18.17■□□□□ 0.5
RPP40-205ENST00000479782 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
RPP40-205ENST00000479782 BCL2L13Q9BXK5 485 aa18.17■□□□□ 0.5
RPP40-205ENST00000479782 STK31Q9BXU1 1019 aa18.17■□□□□ 0.5
RPP40-205ENST00000479782 ATG3Q9NT62 314 aa18.17■□□□□ 0.5
RPP40-205ENST00000479782 ASAP1Q9ULH1 1129 aa18.17■□□□□ 0.5
RPP40-205ENST00000479782 CICQ96RK0 1608 aaPredicted RBP18.16■□□□□ 0.5
RPP40-205ENST00000479782 SMARCC1Q92922 1105 aaPredicted RBP18.16■□□□□ 0.5
RPP40-205ENST00000479782 BTAF1O14981 1849 aa18.16■□□□□ 0.5
RPP40-205ENST00000479782 ZNF831Q5JPB2 1677 aa18.15■□□□□ 0.5
RPP40-205ENST00000479782 IPO8O15397 1037 aaKnown RBP18.15■□□□□ 0.5
RPP40-205ENST00000479782 ADRA2BP18089 450 aa18.15■□□□□ 0.5
RPP40-205ENST00000479782 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
RPP40-205ENST00000479782 KAT6BQ8WYB5 2073 aa18.14■□□□□ 0.5
RPP40-205ENST00000479782 KCNQ2O43526 872 aa18.14■□□□□ 0.49
RPP40-205ENST00000479782 PTCD1O75127 700 aaKnown RBP18.14■□□□□ 0.49
RPP40-205ENST00000479782 FAM182BQ5T319 152 aa18.14■□□□□ 0.49
RPP40-205ENST00000479782 ARHGAP45Q92619 1136 aa18.14■□□□□ 0.49
RPP40-205ENST00000479782 TEX13AQ9BXU3 409 aaPredicted RBP18.14■□□□□ 0.49
RPP40-205ENST00000479782 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
RPP40-205ENST00000479782 MS4A1P11836 297 aa18.13■□□□□ 0.49
RPP40-205ENST00000479782 EIF2S2P20042 333 aaKnown RBP18.13■□□□□ 0.49
RPP40-205ENST00000479782 ZKSCAN2Q63HK3 967 aa18.13■□□□□ 0.49
RPP40-205ENST00000479782 FRAT1Q92837 279 aaPredicted RBP18.13■□□□□ 0.49
RPP40-205ENST00000479782 PRAMEF22A3QJZ6 481 aa18.12■□□□□ 0.49
RPP40-205ENST00000479782 PLIN1O60240 522 aa18.12■□□□□ 0.49
RPP40-205ENST00000479782 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
RPP40-205ENST00000479782 DBF4Q9UBU7 674 aaPredicted RBP18.12■□□□□ 0.49
RPP40-205ENST00000479782 NOB1Q9ULX3 412 aaKnown RBP18.12■□□□□ 0.49
RPP40-205ENST00000479782 PALLDQ8WX93 1383 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms