RNA–Protein interactions for RNA: ENST00000479489.5

TFIP11-212, Transcript of tuftelin interacting protein 11, humanhuman

TSL 2

Gene TFIP11, Length 749 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFIP11-212ENST00000479489 FANCIQ9NVI1 1328 aa13.52□□□□□ -0.25
TFIP11-212ENST00000479489 CT47B1P0C2W7 299 aaPredicted RBP13.51□□□□□ -0.25
TFIP11-212ENST00000479489 PRIM1P49642 420 aaKnown RBP13.51□□□□□ -0.25
TFIP11-212ENST00000479489 FAM196AQ6ZSG2 479 aa13.51□□□□□ -0.25
TFIP11-212ENST00000479489 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
TFIP11-212ENST00000479489 EXOSC9Q06265 439 aaKnown RBP13.5□□□□□ -0.25
TFIP11-212ENST00000479489 ZNF790Q6PG37 636 aa13.5□□□□□ -0.25
TFIP11-212ENST00000479489 TTC5Q8N0Z6 440 aa13.5□□□□□ -0.25
TFIP11-212ENST00000479489 PIGBQ92521 554 aa13.5□□□□□ -0.25
TFIP11-212ENST00000479489 SYTL4Q96C24 671 aaPredicted RBP13.5□□□□□ -0.25
TFIP11-212ENST00000479489 BCL9O00512 1426 aa13.49□□□□□ -0.25
TFIP11-212ENST00000479489 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
TFIP11-212ENST00000479489 THSD7AQ9UPZ6 1657 aa13.49□□□□□ -0.25
TFIP11-212ENST00000479489 DLG5Q8TDM6 1919 aa13.49□□□□□ -0.25
TFIP11-212ENST00000479489 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
TFIP11-212ENST00000479489 ZNF428Q96B54 188 aa13.48□□□□□ -0.25
TFIP11-212ENST00000479489 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
TFIP11-212ENST00000479489 SLC39A6Q13433 755 aa13.47□□□□□ -0.25
TFIP11-212ENST00000479489 TWISTNBQ3B726 338 aaPredicted RBP13.47□□□□□ -0.25
TFIP11-212ENST00000479489 C8orf58Q8NAV2 365 aa13.47□□□□□ -0.25
TFIP11-212ENST00000479489 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
TFIP11-212ENST00000479489 FMNL2Q96PY5 1086 aa13.47□□□□□ -0.25
TFIP11-212ENST00000479489 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
TFIP11-212ENST00000479489 LRRC37A3O60309 1634 aa13.46□□□□□ -0.25
TFIP11-212ENST00000479489 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.25
TFIP11-212ENST00000479489 KCNQ3O43525 872 aa13.46□□□□□ -0.25
TFIP11-212ENST00000479489 VAMP4O75379 141 aa13.46□□□□□ -0.25
TFIP11-212ENST00000479489 FAM182BQ5T319 152 aa13.46□□□□□ -0.25
TFIP11-212ENST00000479489 ATG3Q9NT62 314 aa13.46□□□□□ -0.25
TFIP11-212ENST00000479489 RCAN3Q9UKA8 241 aa13.46□□□□□ -0.25
TFIP11-212ENST00000479489 MRC1P22897 1456 aa13.46□□□□□ -0.25
TFIP11-212ENST00000479489 ELL2O00472 640 aaPredicted RBP13.45□□□□□ -0.26
TFIP11-212ENST00000479489 KCNQ2O43526 872 aa13.45□□□□□ -0.26
TFIP11-212ENST00000479489 HOXB7P09629 217 aa13.45□□□□□ -0.26
TFIP11-212ENST00000479489 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
TFIP11-212ENST00000479489 ASAP1Q9ULH1 1129 aa13.45□□□□□ -0.26
TFIP11-212ENST00000479489 SHANK3Q9BYB0 1731 aa13.44□□□□□ -0.26
TFIP11-212ENST00000479489 SNRPA1P09661 255 aaKnown RBP13.44□□□□□ -0.26
TFIP11-212ENST00000479489 TSPYL6Q8N831 410 aa13.44□□□□□ -0.26
TFIP11-212ENST00000479489 ZNF496Q96IT1 587 aaPredicted RBP13.44□□□□□ -0.26
TFIP11-212ENST00000479489 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
TFIP11-212ENST00000479489 SCN11AQ9UI33 1791 aa13.43□□□□□ -0.26
TFIP11-212ENST00000479489 GIGYF1O75420 1035 aaPredicted RBP13.43□□□□□ -0.26
TFIP11-212ENST00000479489 ALDH1L2Q3SY69 923 aa13.43□□□□□ -0.26
TFIP11-212ENST00000479489 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
TFIP11-212ENST00000479489 HEG1Q9ULI3 1381 aa13.43□□□□□ -0.26
TFIP11-212ENST00000479489 RGS12O14924 1447 aa13.42□□□□□ -0.26
TFIP11-212ENST00000479489 PTCD1O75127 700 aaKnown RBP13.42□□□□□ -0.26
TFIP11-212ENST00000479489 RARSP54136 660 aaKnown RBP13.42□□□□□ -0.26
TFIP11-212ENST00000479489 KRT24Q2M2I5 525 aa13.42□□□□□ -0.26
TFIP11-212ENST00000479489 CCDC30Q5VVM6 783 aa13.42□□□□□ -0.26
TFIP11-212ENST00000479489 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
TFIP11-212ENST00000479489 HMGB2P26583 209 aaKnown RBP13.4□□□□□ -0.26
TFIP11-212ENST00000479489 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
TFIP11-212ENST00000479489 STK31Q9BXU1 1019 aa13.4□□□□□ -0.26
TFIP11-212ENST00000479489 TRIM37O94972 964 aa13.39□□□□□ -0.27
TFIP11-212ENST00000479489 STARD3NLO95772 234 aa13.39□□□□□ -0.27
TFIP11-212ENST00000479489 EIF2S2P20042 333 aaKnown RBP13.39□□□□□ -0.27
TFIP11-212ENST00000479489 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
TFIP11-212ENST00000479489 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.39□□□□□ -0.27
TFIP11-212ENST00000479489 SSH1Q8WYL5 1049 aa13.39□□□□□ -0.27
TFIP11-212ENST00000479489 SMC4Q9NTJ3 1288 aa13.39□□□□□ -0.27
TFIP11-212ENST00000479489 LOC102724428A0A0B4J2F2 783 aa13.38□□□□□ -0.27
TFIP11-212ENST00000479489 IPO8O15397 1037 aaKnown RBP13.38□□□□□ -0.27
TFIP11-212ENST00000479489 SIK1P57059 783 aa13.38□□□□□ -0.27
TFIP11-212ENST00000479489 PTF1AQ7RTS3 328 aa13.38□□□□□ -0.27
TFIP11-212ENST00000479489 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
TFIP11-212ENST00000479489 PALLDQ8WX93 1383 aa13.37□□□□□ -0.27
TFIP11-212ENST00000479489 BCAR3O75815 825 aa13.37□□□□□ -0.27
TFIP11-212ENST00000479489 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
TFIP11-212ENST00000479489 ATP6V1AP38606 617 aa13.37□□□□□ -0.27
TFIP11-212ENST00000479489 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
TFIP11-212ENST00000479489 DBF4Q9UBU7 674 aaPredicted RBP13.37□□□□□ -0.27
TFIP11-212ENST00000479489 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
TFIP11-212ENST00000479489 SIPA1L3O60292 1781 aaPredicted RBP13.37□□□□□ -0.27
TFIP11-212ENST00000479489 PRAMEF22A3QJZ6 481 aa13.36□□□□□ -0.27
TFIP11-212ENST00000479489 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
TFIP11-212ENST00000479489 HYPKQ9NX55 129 aa13.36□□□□□ -0.27
TFIP11-212ENST00000479489 ERBB4Q15303 1308 aa13.36□□□□□ -0.27
TFIP11-212ENST00000479489 TOGARAM1Q9Y4F4 1720 aa13.36□□□□□ -0.27
TFIP11-212ENST00000479489 KAT6BQ8WYB5 2073 aa13.35□□□□□ -0.27
TFIP11-212ENST00000479489 TCERG1O14776 1098 aaKnown RBP13.35□□□□□ -0.27
TFIP11-212ENST00000479489 PLSCR1O15162 318 aa13.35□□□□□ -0.27
TFIP11-212ENST00000479489 APBA3O96018 575 aa13.35□□□□□ -0.27
TFIP11-212ENST00000479489 DNAJC10Q8IXB1 793 aa13.35□□□□□ -0.27
TFIP11-212ENST00000479489 ARHGAP45Q92619 1136 aa13.35□□□□□ -0.27
TFIP11-212ENST00000479489 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
TFIP11-212ENST00000479489 DDX21Q9NR30 783 aaKnown RBP eCLIP13.35□□□□□ -0.27
TFIP11-212ENST00000479489 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
TFIP11-212ENST00000479489 CYP19A1P11511 503 aaPredicted RBP13.34□□□□□ -0.27
TFIP11-212ENST00000479489 MS4A1P11836 297 aa13.34□□□□□ -0.27
TFIP11-212ENST00000479489 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
TFIP11-212ENST00000479489 SLC27A3Q5K4L6 730 aa13.34□□□□□ -0.27
TFIP11-212ENST00000479489 BCL2L13Q9BXK5 485 aa13.34□□□□□ -0.27
TFIP11-212ENST00000479489 RNF123Q5XPI4 1314 aa13.34□□□□□ -0.27
TFIP11-212ENST00000479489 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
TFIP11-212ENST00000479489 ITGB4P16144 1822 aa13.34□□□□□ -0.27
TFIP11-212ENST00000479489 BRWD3Q6RI45 1802 aa13.34□□□□□ -0.27
TFIP11-212ENST00000479489 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
TFIP11-212ENST00000479489 DOT1LQ8TEK3 1739 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms