RNA–Protein interactions for RNA: ENST00000479397.2

CNOT10-215, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-215ENST00000479397 MAP2P11137 1827 aaKnown RBP7.89□□□□□ -1.15
CNOT10-215ENST00000479397 KCPQ6ZWJ8 1503 aa7.89□□□□□ -1.15
CNOT10-215ENST00000479397 PXDNLA1KZ92 1463 aa7.89□□□□□ -1.15
CNOT10-215ENST00000479397 GABBR2O75899 941 aa7.89□□□□□ -1.15
CNOT10-215ENST00000479397 ARHGAP27Q6ZUM4 889 aa7.89□□□□□ -1.15
CNOT10-215ENST00000479397 TIAM2Q8IVF5 1701 aa7.89□□□□□ -1.15
CNOT10-215ENST00000479397 DICER1Q9UPY3 1922 aaKnown RBP7.88□□□□□ -1.15
CNOT10-215ENST00000479397 TNRC18O15417 2968 aaPredicted RBP7.88□□□□□ -1.15
CNOT10-215ENST00000479397 AK7Q96M32 723 aa7.88□□□□□ -1.15
CNOT10-215ENST00000479397 BCS1LQ9Y276 419 aa7.88□□□□□ -1.15
CNOT10-215ENST00000479397 VIRMAQ69YN4 1812 aaKnown RBP7.87□□□□□ -1.15
CNOT10-215ENST00000479397 KTN1Q86UP2 1357 aaKnown RBP7.87□□□□□ -1.15
CNOT10-215ENST00000479397 C4AP0C0L4 1744 aa7.87□□□□□ -1.15
CNOT10-215ENST00000479397 EVC2Q86UK5 1308 aa7.87□□□□□ -1.15
CNOT10-215ENST00000479397 TGFB2P61812 414 aa7.87□□□□□ -1.15
CNOT10-215ENST00000479397 USP31Q70CQ4 1352 aa7.86□□□□□ -1.15
CNOT10-215ENST00000479397 SSFA2P28290 1259 aa7.86□□□□□ -1.15
CNOT10-215ENST00000479397 C9orf131Q5VYM1 1079 aa7.86□□□□□ -1.15
CNOT10-215ENST00000479397 ZCRB1Q8TBF4 217 aaKnown RBP7.86□□□□□ -1.15
CNOT10-215ENST00000479397 RRAGCQ9HB90 399 aa7.86□□□□□ -1.15
CNOT10-215ENST00000479397 PALLDQ8WX93 1383 aa7.85□□□□□ -1.15
CNOT10-215ENST00000479397 PDE4DIPQ5VU43 2346 aa7.85□□□□□ -1.15
CNOT10-215ENST00000479397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.85□□□□□ -1.15
CNOT10-215ENST00000479397 FCHSD2O94868 740 aa7.85□□□□□ -1.15
CNOT10-215ENST00000479397 PHF14O94880 888 aa7.85□□□□□ -1.15
CNOT10-215ENST00000479397 MIER1Q8N108 512 aa7.85□□□□□ -1.15
CNOT10-215ENST00000479397 PRDM10Q9NQV6 1147 aa7.85□□□□□ -1.15
CNOT10-215ENST00000479397 FAM161AQ3B820 660 aa7.84□□□□□ -1.15
CNOT10-215ENST00000479397 ZNF579Q8NAF0 562 aaKnown RBP7.84□□□□□ -1.15
CNOT10-215ENST00000479397 SMARCC1Q92922 1105 aaPredicted RBP7.84□□□□□ -1.15
CNOT10-215ENST00000479397 DLEC1Q9Y238 1755 aa7.84□□□□□ -1.15
CNOT10-215ENST00000479397 COL5A3P25940 1745 aaPredicted RBP7.83□□□□□ -1.16
CNOT10-215ENST00000479397 MEGF6O75095 1541 aa7.83□□□□□ -1.16
CNOT10-215ENST00000479397 CGNL1Q0VF96 1302 aa7.83□□□□□ -1.16
CNOT10-215ENST00000479397 ZC3H4Q9UPT8 1303 aaKnown RBP7.83□□□□□ -1.16
CNOT10-215ENST00000479397 A0A0G2JLW4 131 aa7.83□□□□□ -1.16
CNOT10-215ENST00000479397 MMP10P09238 476 aa7.83□□□□□ -1.16
CNOT10-215ENST00000479397 NBPF1Q3BBV0 1214 aa7.83□□□□□ -1.16
CNOT10-215ENST00000479397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.83□□□□□ -1.16
CNOT10-215ENST00000479397 RNF181Q9P0P0 153 aa7.83□□□□□ -1.16
CNOT10-215ENST00000479397 ZNF831Q5JPB2 1677 aa7.83□□□□□ -1.16
CNOT10-215ENST00000479397 VEGFAP15692 232 aaPredicted RBP7.82□□□□□ -1.16
CNOT10-215ENST00000479397 MLLT1Q03111 559 aaPredicted RBP7.82□□□□□ -1.16
CNOT10-215ENST00000479397 IP6K1Q92551 441 aa7.82□□□□□ -1.16
CNOT10-215ENST00000479397 AIDAQ96BJ3 306 aa7.82□□□□□ -1.16
CNOT10-215ENST00000479397 LTV1Q96GA3 475 aaPredicted RBP7.82□□□□□ -1.16
CNOT10-215ENST00000479397 FOXN1O15353 648 aa7.81□□□□□ -1.16
CNOT10-215ENST00000479397 CTCFP49711 727 aaPredicted RBP7.81□□□□□ -1.16
CNOT10-215ENST00000479397 MPRIPQ6WCQ1 1025 aa7.81□□□□□ -1.16
CNOT10-215ENST00000479397 AMIGO3Q86WK7 504 aa7.81□□□□□ -1.16
CNOT10-215ENST00000479397 NLGN1Q8N2Q7 840 aa7.81□□□□□ -1.16
CNOT10-215ENST00000479397 CCDC87Q9NVE4 849 aa7.81□□□□□ -1.16
CNOT10-215ENST00000479397 MYH14Q7Z406 1995 aaKnown RBP7.8□□□□□ -1.16
CNOT10-215ENST00000479397 PCDH11XQ9BZA7 1347 aa7.8□□□□□ -1.16
CNOT10-215ENST00000479397 PCDH11YQ9BZA8 1340 aa7.8□□□□□ -1.16
CNOT10-215ENST00000479397 AFDNP55196 1824 aaKnown RBP7.8□□□□□ -1.16
CNOT10-215ENST00000479397 EDC4Q6P2E9 1401 aaKnown RBP7.8□□□□□ -1.16
CNOT10-215ENST00000479397 GNPATO15228 680 aa7.8□□□□□ -1.16
CNOT10-215ENST00000479397 DPEP1P16444 411 aa7.8□□□□□ -1.16
CNOT10-215ENST00000479397 NME9Q86XW9 330 aa7.8□□□□□ -1.16
CNOT10-215ENST00000479397 PLCD3Q8N3E9 789 aa7.8□□□□□ -1.16
CNOT10-215ENST00000479397 RAPGEF4Q8WZA2 1011 aa7.8□□□□□ -1.16
CNOT10-215ENST00000479397 PIM2Q9P1W9 311 aa7.8□□□□□ -1.16
CNOT10-215ENST00000479397 RAB3GAP2Q9H2M9 1393 aa7.8□□□□□ -1.16
CNOT10-215ENST00000479397 SCN4AP35499 1836 aa7.8□□□□□ -1.16
CNOT10-215ENST00000479397 SMG6Q86US8 1419 aaKnown RBP7.79□□□□□ -1.16
CNOT10-215ENST00000479397 CACNA1SQ13698 1873 aa7.79□□□□□ -1.16
CNOT10-215ENST00000479397 TMF1P82094 1093 aa7.79□□□□□ -1.16
CNOT10-215ENST00000479397 DALRD3Q5D0E6 543 aaKnown RBP7.79□□□□□ -1.16
CNOT10-215ENST00000479397 SMIM5Q71RC9 77 aa7.79□□□□□ -1.16
CNOT10-215ENST00000479397 ABHD8Q96I13 439 aa7.79□□□□□ -1.16
CNOT10-215ENST00000479397 DCAF5Q96JK2 942 aa7.79□□□□□ -1.16
CNOT10-215ENST00000479397 PHF12Q96QT6 1004 aa7.79□□□□□ -1.16
CNOT10-215ENST00000479397 SBNO2Q9Y2G9 1366 aa7.79□□□□□ -1.16
CNOT10-215ENST00000479397 LOC102724428A0A0B4J2F2 783 aa7.78□□□□□ -1.16
CNOT10-215ENST00000479397 GLTPD2A6NH11 291 aa7.78□□□□□ -1.16
CNOT10-215ENST00000479397 TATP17735 454 aaPredicted RBP7.78□□□□□ -1.16
CNOT10-215ENST00000479397 SIK1P57059 783 aa7.78□□□□□ -1.16
CNOT10-215ENST00000479397 HDGFL2Q7Z4V5 671 aaPredicted RBP7.78□□□□□ -1.16
CNOT10-215ENST00000479397 MKRN1Q9UHC7 482 aaKnown RBP7.78□□□□□ -1.16
CNOT10-215ENST00000479397 PARP3Q9Y6F1 533 aa7.78□□□□□ -1.16
CNOT10-215ENST00000479397 CD163L1Q9NR16 1453 aa7.78□□□□□ -1.16
CNOT10-215ENST00000479397 FER1L6Q2WGJ9 1857 aa7.78□□□□□ -1.16
CNOT10-215ENST00000479397 KDM6AO15550 1401 aaPredicted RBP7.78□□□□□ -1.16
CNOT10-215ENST00000479397 RTL1A6NKG5 1358 aa7.77□□□□□ -1.17
CNOT10-215ENST00000479397 CNTNAP1P78357 1384 aa7.77□□□□□ -1.17
CNOT10-215ENST00000479397 KCNA3P22001 575 aa7.77□□□□□ -1.17
CNOT10-215ENST00000479397 HOXC9P31274 260 aa7.77□□□□□ -1.17
CNOT10-215ENST00000479397 AMPHP49418 695 aa7.77□□□□□ -1.17
CNOT10-215ENST00000479397 CLCN6P51797 869 aa7.77□□□□□ -1.17
CNOT10-215ENST00000479397 TRAPPC3LQ5T215 181 aa7.77□□□□□ -1.17
CNOT10-215ENST00000479397 LINC00116Q8NCU8 138 aa7.77□□□□□ -1.17
CNOT10-215ENST00000479397 RTCBQ9Y3I0 505 aaKnown RBP7.77□□□□□ -1.17
CNOT10-215ENST00000479397 KIF20BQ96Q89 1820 aa7.76□□□□□ -1.17
CNOT10-215ENST00000479397 LMNB1P20700 586 aa7.76□□□□□ -1.17
CNOT10-215ENST00000479397 ATP6V1AP38606 617 aa7.76□□□□□ -1.17
CNOT10-215ENST00000479397 RGS19P49795 217 aa7.76□□□□□ -1.17
CNOT10-215ENST00000479397 LBX1P52954 281 aa7.76□□□□□ -1.17
CNOT10-215ENST00000479397 TSPYL2Q9H2G4 693 aaPredicted RBP7.76□□□□□ -1.17
CNOT10-215ENST00000479397 FBXO3Q9UK99 471 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms