RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 LINC00116Q8NCU8 138 aa24.03■■□□□ 1.44
HLA-A-206ENST00000479320 FLAD1Q8NFF5 587 aa24.03■■□□□ 1.44
HLA-A-206ENST00000479320 AK7Q96M32 723 aa24.03■■□□□ 1.44
HLA-A-206ENST00000479320 COL3A1P02461 1466 aaPredicted RBP24.02■■□□□ 1.44
HLA-A-206ENST00000479320 ITPK1Q13572 414 aa24.02■■□□□ 1.44
HLA-A-206ENST00000479320 DCAF8L1A6NGE4 600 aa24.01■■□□□ 1.43
HLA-A-206ENST00000479320 AKAP4Q5JQC9 854 aa24.01■■□□□ 1.43
HLA-A-206ENST00000479320 AMIGO3Q86WK7 504 aa24.01■■□□□ 1.43
HLA-A-206ENST00000479320 UBR3Q6ZT12 1888 aa24.01■■□□□ 1.43
HLA-A-206ENST00000479320 NFATC2IPQ8NCF5 419 aa24■■□□□ 1.43
HLA-A-206ENST00000479320 SCN11AQ9UI33 1791 aa24■■□□□ 1.43
HLA-A-206ENST00000479320 SMIM5Q71RC9 77 aa23.99■■□□□ 1.43
HLA-A-206ENST00000479320 SLC4A9Q96Q91 983 aa23.99■■□□□ 1.43
HLA-A-206ENST00000479320 RBM42Q9BTD8 480 aaKnown RBP23.99■■□□□ 1.43
HLA-A-206ENST00000479320 MAP3K5Q99683 1374 aa23.98■■□□□ 1.43
HLA-A-206ENST00000479320 U2SURPO15042 1029 aaKnown RBP23.97■■□□□ 1.43
HLA-A-206ENST00000479320 MTHFSDQ2M296 383 aaKnown RBP23.97■■□□□ 1.43
HLA-A-206ENST00000479320 ZNF831Q5JPB2 1677 aa23.97■■□□□ 1.43
HLA-A-206ENST00000479320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.96■■□□□ 1.43
HLA-A-206ENST00000479320 PHF14O94880 888 aa23.96■■□□□ 1.43
HLA-A-206ENST00000479320 MSL1Q68DK7 614 aa23.96■■□□□ 1.43
HLA-A-206ENST00000479320 LGR6Q9HBX8 967 aa23.96■■□□□ 1.43
HLA-A-206ENST00000479320 VIRMAQ69YN4 1812 aaKnown RBP23.95■■□□□ 1.43
HLA-A-206ENST00000479320 SSFA2P28290 1259 aa23.95■■□□□ 1.42
HLA-A-206ENST00000479320 PPP2R1AP30153 589 aa23.94■■□□□ 1.42
HLA-A-206ENST00000479320 GNPATO15228 680 aa23.93■■□□□ 1.42
HLA-A-206ENST00000479320 RNMTO43148 476 aaKnown RBP23.93■■□□□ 1.42
HLA-A-206ENST00000479320 KLHL34Q8N239 644 aa23.93■■□□□ 1.42
HLA-A-206ENST00000479320 CFAP53Q96M91 514 aa23.93■■□□□ 1.42
HLA-A-206ENST00000479320 PTCD1O75127 700 aaKnown RBP23.92■■□□□ 1.42
HLA-A-206ENST00000479320 SLC52A2Q9HAB3 445 aa23.92■■□□□ 1.42
HLA-A-206ENST00000479320 COL5A3P25940 1745 aaPredicted RBP23.91■■□□□ 1.42
HLA-A-206ENST00000479320 RC3H1Q5TC82 1133 aaKnown RBP23.89■■□□□ 1.42
HLA-A-206ENST00000479320 ADAMTS7Q9UKP4 1686 aa23.89■■□□□ 1.41
HLA-A-206ENST00000479320 RTCBQ9Y3I0 505 aaKnown RBP23.88■■□□□ 1.41
HLA-A-206ENST00000479320 MYH14Q7Z406 1995 aaKnown RBP23.88■■□□□ 1.41
HLA-A-206ENST00000479320 MRC1P22897 1456 aa23.87■■□□□ 1.41
HLA-A-206ENST00000479320 CNTNAP4Q9C0A0 1308 aa23.87■■□□□ 1.41
HLA-A-206ENST00000479320 YY1P25490 414 aa23.86■■□□□ 1.41
HLA-A-206ENST00000479320 TRAPPC3LQ5T215 181 aa23.86■■□□□ 1.41
HLA-A-206ENST00000479320 NLGN2Q8NFZ4 835 aa23.86■■□□□ 1.41
HLA-A-206ENST00000479320 NUDCQ9Y266 331 aa23.86■■□□□ 1.41
HLA-A-206ENST00000479320 RPS6KA4O75676 772 aa23.85■■□□□ 1.41
HLA-A-206ENST00000479320 GAS2L2Q8NHY3 880 aa23.85■■□□□ 1.41
HLA-A-206ENST00000479320 RSPH6AQ9H0K4 717 aa23.85■■□□□ 1.41
HLA-A-206ENST00000479320 PRKAR2BP31323 418 aa23.84■■□□□ 1.41
HLA-A-206ENST00000479320 SLC39A6Q13433 755 aa23.84■■□□□ 1.41
HLA-A-206ENST00000479320 PHACTR3Q96KR7 559 aa23.84■■□□□ 1.41
HLA-A-206ENST00000479320 TJP1Q07157 1748 aa23.84■■□□□ 1.41
HLA-A-206ENST00000479320 UTRNP46939 3433 aa23.84■■□□□ 1.41
HLA-A-206ENST00000479320 GNAT3A8MTJ3 354 aa23.84■■□□□ 1.41
HLA-A-206ENST00000479320 ARHGEF1Q92888 912 aaKnown RBP23.84■■□□□ 1.41
HLA-A-206ENST00000479320 CICQ96RK0 1608 aaPredicted RBP23.83■■□□□ 1.41
HLA-A-206ENST00000479320 U2AF1L5P0DN76 240 aaPredicted RBP23.83■■□□□ 1.4
HLA-A-206ENST00000479320 CRKLP46109 303 aaKnown RBP23.83■■□□□ 1.4
HLA-A-206ENST00000479320 U2AF1Q01081 240 aaKnown RBP eCLIP23.83■■□□□ 1.4
HLA-A-206ENST00000479320 IL17REQ8NFR9 667 aa23.83■■□□□ 1.4
HLA-A-206ENST00000479320 ADRA2BP18089 450 aa23.82■■□□□ 1.4
HLA-A-206ENST00000479320 GPR162Q16538 588 aa23.82■■□□□ 1.4
HLA-A-206ENST00000479320 CD2APQ9Y5K6 639 aa23.82■■□□□ 1.4
HLA-A-206ENST00000479320 FCHSD2O94868 740 aa23.8■■□□□ 1.4
HLA-A-206ENST00000479320 DNAJC10Q8IXB1 793 aa23.8■■□□□ 1.4
HLA-A-206ENST00000479320 RFC4P35249 363 aa23.79■■□□□ 1.4
HLA-A-206ENST00000479320 KCPQ6ZWJ8 1503 aa23.78■■□□□ 1.4
HLA-A-206ENST00000479320 CHD4Q14839 1912 aa23.78■■□□□ 1.4
HLA-A-206ENST00000479320 TEFQ10587 303 aa23.78■■□□□ 1.4
HLA-A-206ENST00000479320 INTS5Q6P9B9 1019 aaKnown RBP23.78■■□□□ 1.4
HLA-A-206ENST00000479320 NLGN1Q8N2Q7 840 aa23.78■■□□□ 1.4
HLA-A-206ENST00000479320 C4AP0C0L4 1744 aa23.77■■□□□ 1.4
HLA-A-206ENST00000479320 SIPA1L3O60292 1781 aaPredicted RBP23.76■■□□□ 1.39
HLA-A-206ENST00000479320 MMP10P09238 476 aa23.76■■□□□ 1.39
HLA-A-206ENST00000479320 GYS1P13807 737 aa23.76■■□□□ 1.39
HLA-A-206ENST00000479320 UBR2Q8IWV8 1755 aa23.76■■□□□ 1.39
HLA-A-206ENST00000479320 GOLGB1Q14789 3259 aaKnown RBP23.75■■□□□ 1.39
HLA-A-206ENST00000479320 CYP19A1P11511 503 aaPredicted RBP23.75■■□□□ 1.39
HLA-A-206ENST00000479320 ZEB1P37275 1124 aaPredicted RBP23.75■■□□□ 1.39
HLA-A-206ENST00000479320 VSIG10Q8N0Z9 540 aa23.75■■□□□ 1.39
HLA-A-206ENST00000479320 CCDC87Q9NVE4 849 aa23.75■■□□□ 1.39
HLA-A-206ENST00000479320 CEMIPQ8WUJ3 1361 aa23.74■■□□□ 1.39
HLA-A-206ENST00000479320 DDX10Q13206 875 aaKnown RBP23.74■■□□□ 1.39
HLA-A-206ENST00000479320 TTC5Q8N0Z6 440 aa23.74■■□□□ 1.39
HLA-A-206ENST00000479320 YBX3P16989 372 aaKnown RBP eCLIP23.72■■□□□ 1.39
HLA-A-206ENST00000479320 ZNF790Q6PG37 636 aa23.72■■□□□ 1.39
HLA-A-206ENST00000479320 SRP68Q9UHB9 627 aaKnown RBP23.72■■□□□ 1.39
HLA-A-206ENST00000479320 ZNF496Q96IT1 587 aaPredicted RBP23.7■■□□□ 1.38
HLA-A-206ENST00000479320 SOS1Q07889 1333 aaPredicted RBP23.7■■□□□ 1.38
HLA-A-206ENST00000479320 USP42Q9H9J4 1324 aaKnown RBP23.7■■□□□ 1.38
HLA-A-206ENST00000479320 RALBP1Q15311 655 aa23.69■■□□□ 1.38
HLA-A-206ENST00000479320 RTF1Q92541 710 aaKnown RBP23.69■■□□□ 1.38
HLA-A-206ENST00000479320 ZBTB1Q9Y2K1 713 aa23.69■■□□□ 1.38
HLA-A-206ENST00000479320 BTBD11A6QL63 1104 aa23.68■■□□□ 1.38
HLA-A-206ENST00000479320 GRIN3BO60391 1043 aa23.68■■□□□ 1.38
HLA-A-206ENST00000479320 MCM10Q7L590 875 aa23.68■■□□□ 1.38
HLA-A-206ENST00000479320 HEG1Q9ULI3 1381 aa23.67■■□□□ 1.38
HLA-A-206ENST00000479320 FKBP8Q14318 412 aa23.67■■□□□ 1.38
HLA-A-206ENST00000479320 PARP3Q9Y6F1 533 aa23.67■■□□□ 1.38
HLA-A-206ENST00000479320 KIF13BQ9NQT8 1826 aa23.67■■□□□ 1.38
HLA-A-206ENST00000479320 KCNQ3O43525 872 aa23.66■■□□□ 1.38
HLA-A-206ENST00000479320 HTATSF1O43719 755 aaKnown RBP23.66■■□□□ 1.38
HLA-A-206ENST00000479320 ZPR1O75312 459 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms