RNA–Protein interactions for RNA: ENST00000479317.1

RRP12-206, Transcript of ribosomal RNA processing 12 homolog, humanhuman

TSL 3

Gene RRP12, Length 411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP12-206ENST00000479317 PHACTR3Q96KR7 559 aa13.55□□□□□ -0.24
RRP12-206ENST00000479317 AK7Q96M32 723 aa13.55□□□□□ -0.24
RRP12-206ENST00000479317 SLC52A2Q9HAB3 445 aa13.55□□□□□ -0.24
RRP12-206ENST00000479317 GNAT3A8MTJ3 354 aa13.54□□□□□ -0.24
RRP12-206ENST00000479317 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
RRP12-206ENST00000479317 PTGER2P43116 358 aa13.54□□□□□ -0.24
RRP12-206ENST00000479317 ITPK1Q13572 414 aa13.54□□□□□ -0.24
RRP12-206ENST00000479317 COL23A1Q86Y22 540 aaPredicted RBP13.54□□□□□ -0.24
RRP12-206ENST00000479317 LINC00116Q8NCU8 138 aa13.54□□□□□ -0.24
RRP12-206ENST00000479317 FLAD1Q8NFF5 587 aa13.54□□□□□ -0.24
RRP12-206ENST00000479317 LRP5O75197 1615 aa13.53□□□□□ -0.24
RRP12-206ENST00000479317 TOGARAM1Q9Y4F4 1720 aa13.53□□□□□ -0.24
RRP12-206ENST00000479317 SLC4A9Q96Q91 983 aa13.53□□□□□ -0.24
RRP12-206ENST00000479317 PAPPAQ13219 1627 aa13.53□□□□□ -0.24
RRP12-206ENST00000479317 NEFMP07197 916 aa13.52□□□□□ -0.25
RRP12-206ENST00000479317 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
RRP12-206ENST00000479317 LY75O60449 1722 aa13.51□□□□□ -0.25
RRP12-206ENST00000479317 MAP3K5Q99683 1374 aa13.51□□□□□ -0.25
RRP12-206ENST00000479317 GNPATO15228 680 aa13.51□□□□□ -0.25
RRP12-206ENST00000479317 PHF14O94880 888 aa13.51□□□□□ -0.25
RRP12-206ENST00000479317 POLD1P28340 1107 aa13.51□□□□□ -0.25
RRP12-206ENST00000479317 SLC39A6Q13433 755 aa13.51□□□□□ -0.25
RRP12-206ENST00000479317 SGIP1Q9BQI5 828 aa13.51□□□□□ -0.25
RRP12-206ENST00000479317 MYBBP1AQ9BQG0 1328 aaKnown RBP13.5□□□□□ -0.25
RRP12-206ENST00000479317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.5□□□□□ -0.25
RRP12-206ENST00000479317 TEFQ10587 303 aa13.5□□□□□ -0.25
RRP12-206ENST00000479317 SMIM5Q71RC9 77 aa13.5□□□□□ -0.25
RRP12-206ENST00000479317 RTF1Q92541 710 aaKnown RBP13.5□□□□□ -0.25
RRP12-206ENST00000479317 ARXQ96QS3 562 aa13.5□□□□□ -0.25
RRP12-206ENST00000479317 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
RRP12-206ENST00000479317 ITGB4P16144 1822 aa13.49□□□□□ -0.25
RRP12-206ENST00000479317 ZNF316A6NFI3 1004 aaPredicted RBP13.49□□□□□ -0.25
RRP12-206ENST00000479317 SSFA2P28290 1259 aa13.49□□□□□ -0.25
RRP12-206ENST00000479317 RC3H1Q5TC82 1133 aaKnown RBP13.49□□□□□ -0.25
RRP12-206ENST00000479317 AMIGO3Q86WK7 504 aa13.49□□□□□ -0.25
RRP12-206ENST00000479317 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
RRP12-206ENST00000479317 CASZ1Q86V15 1759 aa13.48□□□□□ -0.25
RRP12-206ENST00000479317 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
RRP12-206ENST00000479317 TTC5Q8N0Z6 440 aa13.48□□□□□ -0.25
RRP12-206ENST00000479317 PRKRIP1Q9H875 184 aaPredicted RBP13.48□□□□□ -0.25
RRP12-206ENST00000479317 TRAPPC3LQ5T215 181 aa13.47□□□□□ -0.25
RRP12-206ENST00000479317 FHDC1Q9C0D6 1143 aaPredicted RBP13.47□□□□□ -0.25
RRP12-206ENST00000479317 CNTNAP4Q9C0A0 1308 aa13.46□□□□□ -0.25
RRP12-206ENST00000479317 HTATSF1O43719 755 aaKnown RBP13.46□□□□□ -0.25
RRP12-206ENST00000479317 RPS6KA4O75676 772 aa13.46□□□□□ -0.25
RRP12-206ENST00000479317 CRKLP46109 303 aaKnown RBP13.46□□□□□ -0.25
RRP12-206ENST00000479317 MCM10Q7L590 875 aa13.46□□□□□ -0.25
RRP12-206ENST00000479317 DNAJC10Q8IXB1 793 aa13.46□□□□□ -0.25
RRP12-206ENST00000479317 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
RRP12-206ENST00000479317 SYT17Q9BSW7 474 aa13.46□□□□□ -0.25
RRP12-206ENST00000479317 MAPK8IP3Q9UPT6 1336 aa13.45□□□□□ -0.26
RRP12-206ENST00000479317 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
RRP12-206ENST00000479317 BTBD11A6QL63 1104 aa13.45□□□□□ -0.26
RRP12-206ENST00000479317 ZNF790Q6PG37 636 aa13.45□□□□□ -0.26
RRP12-206ENST00000479317 KLHL34Q8N239 644 aa13.45□□□□□ -0.26
RRP12-206ENST00000479317 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
RRP12-206ENST00000479317 ADRA2BP18089 450 aa13.44□□□□□ -0.26
RRP12-206ENST00000479317 RFC4P35249 363 aa13.44□□□□□ -0.26
RRP12-206ENST00000479317 DCTN1Q14203 1278 aa13.44□□□□□ -0.26
RRP12-206ENST00000479317 VSIG10Q8N0Z9 540 aa13.44□□□□□ -0.26
RRP12-206ENST00000479317 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
RRP12-206ENST00000479317 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
RRP12-206ENST00000479317 MRC1P22897 1456 aa13.43□□□□□ -0.26
RRP12-206ENST00000479317 CYP19A1P11511 503 aaPredicted RBP13.43□□□□□ -0.26
RRP12-206ENST00000479317 WDR43Q15061 677 aaKnown RBP eCLIP13.43□□□□□ -0.26
RRP12-206ENST00000479317 NFE2L2Q16236 605 aa13.43□□□□□ -0.26
RRP12-206ENST00000479317 INTS5Q6P9B9 1019 aaKnown RBP13.43□□□□□ -0.26
RRP12-206ENST00000479317 ZNF496Q96IT1 587 aaPredicted RBP13.43□□□□□ -0.26
RRP12-206ENST00000479317 CCDC87Q9NVE4 849 aa13.43□□□□□ -0.26
RRP12-206ENST00000479317 C5P01031 1676 aa13.43□□□□□ -0.26
RRP12-206ENST00000479317 STARD3NLO95772 234 aa13.42□□□□□ -0.26
RRP12-206ENST00000479317 TAF7Q15545 349 aaPredicted RBP13.42□□□□□ -0.26
RRP12-206ENST00000479317 FMNL2Q96PY5 1086 aa13.42□□□□□ -0.26
RRP12-206ENST00000479317 TEX13AQ9BXU3 409 aaPredicted RBP13.42□□□□□ -0.26
RRP12-206ENST00000479317 SCN11AQ9UI33 1791 aa13.41□□□□□ -0.26
RRP12-206ENST00000479317 KCNQ3O43525 872 aa13.41□□□□□ -0.26
RRP12-206ENST00000479317 NLGN1Q8N2Q7 840 aa13.41□□□□□ -0.26
RRP12-206ENST00000479317 RIPK4P57078 832 aa13.4□□□□□ -0.26
RRP12-206ENST00000479317 ADAMTS8Q9UP79 889 aa13.4□□□□□ -0.26
RRP12-206ENST00000479317 QSER1Q2KHR3 1735 aa13.39□□□□□ -0.27
RRP12-206ENST00000479317 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
RRP12-206ENST00000479317 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
RRP12-206ENST00000479317 HEG1Q9ULI3 1381 aa13.39□□□□□ -0.27
RRP12-206ENST00000479317 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
RRP12-206ENST00000479317 ADAMTS7Q9UKP4 1686 aa13.38□□□□□ -0.27
RRP12-206ENST00000479317 ZPR1O75312 459 aa13.38□□□□□ -0.27
RRP12-206ENST00000479317 MMP10P09238 476 aa13.38□□□□□ -0.27
RRP12-206ENST00000479317 GYS1P13807 737 aa13.38□□□□□ -0.27
RRP12-206ENST00000479317 CANXP27824 592 aaKnown RBP13.38□□□□□ -0.27
RRP12-206ENST00000479317 TMPOP42166 694 aaKnown RBP13.38□□□□□ -0.27
RRP12-206ENST00000479317 PNISRQ8TF01 805 aaKnown RBP13.38□□□□□ -0.27
RRP12-206ENST00000479317 RUNDC1Q96C34 613 aa13.38□□□□□ -0.27
RRP12-206ENST00000479317 THUMPD2Q9BTF0 503 aaKnown RBP13.38□□□□□ -0.27
RRP12-206ENST00000479317 SRP68Q9UHB9 627 aaKnown RBP13.38□□□□□ -0.27
RRP12-206ENST00000479317 ZBTB1Q9Y2K1 713 aa13.38□□□□□ -0.27
RRP12-206ENST00000479317 KCPQ6ZWJ8 1503 aa13.38□□□□□ -0.27
RRP12-206ENST00000479317 SOS1Q07889 1333 aaPredicted RBP13.38□□□□□ -0.27
RRP12-206ENST00000479317 ANP32CO43423 234 aa13.37□□□□□ -0.27
RRP12-206ENST00000479317 SNRPA1P09661 255 aaKnown RBP13.37□□□□□ -0.27
RRP12-206ENST00000479317 NEUROD2Q15784 382 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms