RNA–Protein interactions for RNA: ENST00000479261.1

DEPDC5-217, Transcript of DEP domain containing 5, humanhuman

TSL 2

Gene DEPDC5, Length 713 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-217ENST00000479261 MRC1P22897 1456 aa16.48■□□□□ 0.23
DEPDC5-217ENST00000479261 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
DEPDC5-217ENST00000479261 TAF1LQ8IZX4 1826 aa16.47■□□□□ 0.23
DEPDC5-217ENST00000479261 LOC102724428A0A0B4J2F2 783 aa16.47■□□□□ 0.23
DEPDC5-217ENST00000479261 SIK1P57059 783 aa16.47■□□□□ 0.23
DEPDC5-217ENST00000479261 CABP4P57796 275 aa16.47■□□□□ 0.23
DEPDC5-217ENST00000479261 ITPK1Q13572 414 aa16.47■□□□□ 0.23
DEPDC5-217ENST00000479261 CCNL1Q9UK58 526 aaPredicted RBP16.47■□□□□ 0.23
DEPDC5-217ENST00000479261 ADAMTS8Q9UP79 889 aa16.47■□□□□ 0.23
DEPDC5-217ENST00000479261 AMIGO3Q86WK7 504 aa16.46■□□□□ 0.23
DEPDC5-217ENST00000479261 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
DEPDC5-217ENST00000479261 ZNF831Q5JPB2 1677 aa16.46■□□□□ 0.23
DEPDC5-217ENST00000479261 HTATSF1O43719 755 aaKnown RBP16.45■□□□□ 0.22
DEPDC5-217ENST00000479261 SIPA1L3O60292 1781 aaPredicted RBP16.44■□□□□ 0.22
DEPDC5-217ENST00000479261 CASZ1Q86V15 1759 aa16.44■□□□□ 0.22
DEPDC5-217ENST00000479261 LINC00116Q8NCU8 138 aa16.43■□□□□ 0.22
DEPDC5-217ENST00000479261 STK32BQ9NY57 414 aa16.43■□□□□ 0.22
DEPDC5-217ENST00000479261 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
DEPDC5-217ENST00000479261 PNPLA7Q6ZV29 1317 aa16.43■□□□□ 0.22
DEPDC5-217ENST00000479261 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
DEPDC5-217ENST00000479261 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
DEPDC5-217ENST00000479261 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
DEPDC5-217ENST00000479261 PNISRQ8TF01 805 aaKnown RBP16.42■□□□□ 0.22
DEPDC5-217ENST00000479261 SGIP1Q9BQI5 828 aa16.42■□□□□ 0.22
DEPDC5-217ENST00000479261 MCM10Q7L590 875 aa16.41■□□□□ 0.22
DEPDC5-217ENST00000479261 QSER1Q2KHR3 1735 aa16.41■□□□□ 0.22
DEPDC5-217ENST00000479261 MYH14Q7Z406 1995 aaKnown RBP16.4■□□□□ 0.22
DEPDC5-217ENST00000479261 TUBGCP6Q96RT7 1819 aa16.4■□□□□ 0.22
DEPDC5-217ENST00000479261 C5P01031 1676 aa16.4■□□□□ 0.22
DEPDC5-217ENST00000479261 ATP6V1AP38606 617 aa16.4■□□□□ 0.22
DEPDC5-217ENST00000479261 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
DEPDC5-217ENST00000479261 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
DEPDC5-217ENST00000479261 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
DEPDC5-217ENST00000479261 CICQ96RK0 1608 aaPredicted RBP16.39■□□□□ 0.21
DEPDC5-217ENST00000479261 KCNQ3O43525 872 aa16.39■□□□□ 0.21
DEPDC5-217ENST00000479261 PTGER2P43116 358 aa16.39■□□□□ 0.21
DEPDC5-217ENST00000479261 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
DEPDC5-217ENST00000479261 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
DEPDC5-217ENST00000479261 COL23A1Q86Y22 540 aaPredicted RBP16.39■□□□□ 0.21
DEPDC5-217ENST00000479261 UBR2Q8IWV8 1755 aa16.38■□□□□ 0.21
DEPDC5-217ENST00000479261 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
DEPDC5-217ENST00000479261 ZNF790Q6PG37 636 aa16.38■□□□□ 0.21
DEPDC5-217ENST00000479261 RUNDC1Q96C34 613 aa16.38■□□□□ 0.21
DEPDC5-217ENST00000479261 TRIM35Q9UPQ4 493 aa16.38■□□□□ 0.21
DEPDC5-217ENST00000479261 C4BP0C0L5 1744 aa16.38■□□□□ 0.21
DEPDC5-217ENST00000479261 COL24A1Q17RW2 1714 aa16.38■□□□□ 0.21
DEPDC5-217ENST00000479261 COL5A3P25940 1745 aaPredicted RBP16.37■□□□□ 0.21
DEPDC5-217ENST00000479261 ANP32CO43423 234 aa16.37■□□□□ 0.21
DEPDC5-217ENST00000479261 INTS5Q6P9B9 1019 aaKnown RBP16.37■□□□□ 0.21
DEPDC5-217ENST00000479261 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
DEPDC5-217ENST00000479261 RBM42Q9BTD8 480 aaKnown RBP16.37■□□□□ 0.21
DEPDC5-217ENST00000479261 UBR3Q6ZT12 1888 aa16.37■□□□□ 0.21
DEPDC5-217ENST00000479261 LRP5O75197 1615 aa16.37■□□□□ 0.21
DEPDC5-217ENST00000479261 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
DEPDC5-217ENST00000479261 ZNF496Q96IT1 587 aaPredicted RBP16.36■□□□□ 0.21
DEPDC5-217ENST00000479261 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
DEPDC5-217ENST00000479261 CYP19A1P11511 503 aaPredicted RBP16.35■□□□□ 0.21
DEPDC5-217ENST00000479261 HMGB2P26583 209 aaKnown RBP16.35■□□□□ 0.21
DEPDC5-217ENST00000479261 RIPK4P57078 832 aa16.35■□□□□ 0.21
DEPDC5-217ENST00000479261 TEFQ10587 303 aa16.35■□□□□ 0.21
DEPDC5-217ENST00000479261 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
DEPDC5-217ENST00000479261 THUMPD2Q9BTF0 503 aaKnown RBP16.35■□□□□ 0.21
DEPDC5-217ENST00000479261 TJP1Q07157 1748 aa16.35■□□□□ 0.21
DEPDC5-217ENST00000479261 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
DEPDC5-217ENST00000479261 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
DEPDC5-217ENST00000479261 RPS6KA4O75676 772 aa16.34■□□□□ 0.21
DEPDC5-217ENST00000479261 DNAJC10Q8IXB1 793 aa16.34■□□□□ 0.21
DEPDC5-217ENST00000479261 SLC16A10Q8TF71 515 aa16.34■□□□□ 0.21
DEPDC5-217ENST00000479261 RTF1Q92541 710 aaKnown RBP16.34■□□□□ 0.21
DEPDC5-217ENST00000479261 BTBD11A6QL63 1104 aa16.33■□□□□ 0.2
DEPDC5-217ENST00000479261 ZBTB7AO95365 584 aa16.33■□□□□ 0.2
DEPDC5-217ENST00000479261 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.2
DEPDC5-217ENST00000479261 MTFR1LQ9H019 292 aa16.33■□□□□ 0.2
DEPDC5-217ENST00000479261 SPON1Q9HCB6 807 aa16.33■□□□□ 0.2
DEPDC5-217ENST00000479261 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
DEPDC5-217ENST00000479261 MIS18AQ9NYP9 233 aa16.32■□□□□ 0.2
DEPDC5-217ENST00000479261 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
DEPDC5-217ENST00000479261 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.31■□□□□ 0.2
DEPDC5-217ENST00000479261 SSFA2P28290 1259 aa16.31■□□□□ 0.2
DEPDC5-217ENST00000479261 FLAD1Q8NFF5 587 aa16.31■□□□□ 0.2
DEPDC5-217ENST00000479261 RRP7AQ9Y3A4 280 aaKnown RBP16.31■□□□□ 0.2
DEPDC5-217ENST00000479261 USP16Q9Y5T5 823 aa16.31■□□□□ 0.2
DEPDC5-217ENST00000479261 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
DEPDC5-217ENST00000479261 PRAMEF22A3QJZ6 481 aa16.3■□□□□ 0.2
DEPDC5-217ENST00000479261 APAF1O14727 1248 aa16.3■□□□□ 0.2
DEPDC5-217ENST00000479261 ARHGEF1Q92888 912 aaKnown RBP16.3■□□□□ 0.2
DEPDC5-217ENST00000479261 CHL1O00533 1208 aa16.29■□□□□ 0.2
DEPDC5-217ENST00000479261 NEFMP07197 916 aa16.29■□□□□ 0.2
DEPDC5-217ENST00000479261 AK7Q96M32 723 aa16.29■□□□□ 0.2
DEPDC5-217ENST00000479261 MRS2Q9HD23 443 aa16.29■□□□□ 0.2
DEPDC5-217ENST00000479261 GNPATO15228 680 aa16.28■□□□□ 0.2
DEPDC5-217ENST00000479261 EIF4A1P60842 406 aaKnown RBP16.28■□□□□ 0.2
DEPDC5-217ENST00000479261 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
DEPDC5-217ENST00000479261 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
DEPDC5-217ENST00000479261 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
DEPDC5-217ENST00000479261 ZNF853P0CG23 659 aa16.27■□□□□ 0.2
DEPDC5-217ENST00000479261 RTCBQ9Y3I0 505 aaKnown RBP16.27■□□□□ 0.2
DEPDC5-217ENST00000479261 KDM3BQ7LBC6 1761 aa16.27■□□□□ 0.2
DEPDC5-217ENST00000479261 GIGYF1O75420 1035 aaPredicted RBP16.26■□□□□ 0.19
DEPDC5-217ENST00000479261 ADRA2BP18089 450 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms