RNA–Protein interactions for RNA: ENST00000479234.1

SCAF8-206, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-206ENST00000479234 TRIM67Q6ZTA4 783 aa8.15□□□□□ -1.1
SCAF8-206ENST00000479234 HDGFL2Q7Z4V5 671 aaPredicted RBP8.15□□□□□ -1.1
SCAF8-206ENST00000479234 DDRGK1Q96HY6 314 aa8.15□□□□□ -1.1
SCAF8-206ENST00000479234 MYH16Q9H6N6 1097 aa8.15□□□□□ -1.1
SCAF8-206ENST00000479234 STK26Q9P289 416 aa8.15□□□□□ -1.1
SCAF8-206ENST00000479234 TMEM131LA2VDJ0 1609 aa8.14□□□□□ -1.11
SCAF8-206ENST00000479234 TNNT2P45379 298 aaPredicted RBP8.14□□□□□ -1.11
SCAF8-206ENST00000479234 FBXO31Q5XUX0 539 aaPredicted RBP8.14□□□□□ -1.11
SCAF8-206ENST00000479234 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.14□□□□□ -1.11
SCAF8-206ENST00000479234 SIRT1Q96EB6 747 aa8.14□□□□□ -1.11
SCAF8-206ENST00000479234 PRAM1Q96QH2 718 aa8.14□□□□□ -1.11
SCAF8-206ENST00000479234 PCDHB3Q9Y5E6 796 aa8.14□□□□□ -1.11
SCAF8-206ENST00000479234 ARHGEF28Q8N1W1 1705 aaKnown RBP8.14□□□□□ -1.11
SCAF8-206ENST00000479234 PTPRMP28827 1452 aa8.13□□□□□ -1.11
SCAF8-206ENST00000479234 IL16Q14005 1332 aa8.13□□□□□ -1.11
SCAF8-206ENST00000479234 FYB1O15117 783 aa8.13□□□□□ -1.11
SCAF8-206ENST00000479234 U2AF1L5P0DN76 240 aaPredicted RBP8.13□□□□□ -1.11
SCAF8-206ENST00000479234 RARSP54136 660 aaKnown RBP8.13□□□□□ -1.11
SCAF8-206ENST00000479234 PRR20EP86478 221 aa8.13□□□□□ -1.11
SCAF8-206ENST00000479234 PRR20CP86479 221 aa8.13□□□□□ -1.11
SCAF8-206ENST00000479234 PRR20DP86480 221 aa8.13□□□□□ -1.11
SCAF8-206ENST00000479234 PRR20BP86481 221 aa8.13□□□□□ -1.11
SCAF8-206ENST00000479234 PRR20AP86496 221 aa8.13□□□□□ -1.11
SCAF8-206ENST00000479234 U2AF1Q01081 240 aaKnown RBP eCLIP8.13□□□□□ -1.11
SCAF8-206ENST00000479234 CDK19Q9BWU1 502 aa8.13□□□□□ -1.11
SCAF8-206ENST00000479234 PREX1Q8TCU6 1659 aa8.13□□□□□ -1.11
SCAF8-206ENST00000479234 IQSEC2Q5JU85 1478 aa8.13□□□□□ -1.11
SCAF8-206ENST00000479234 A0A1W2PP64 1363 aa8.12□□□□□ -1.11
SCAF8-206ENST00000479234 MINK1Q8N4C8 1332 aaPredicted RBP8.12□□□□□ -1.11
SCAF8-206ENST00000479234 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
SCAF8-206ENST00000479234 DGAT1O75907 488 aa8.12□□□□□ -1.11
SCAF8-206ENST00000479234 SLC19A1P41440 591 aa8.12□□□□□ -1.11
SCAF8-206ENST00000479234 FAM161AQ3B820 660 aa8.12□□□□□ -1.11
SCAF8-206ENST00000479234 PKDCCQ504Y2 493 aa8.12□□□□□ -1.11
SCAF8-206ENST00000479234 ANKLE1Q8NAG6 615 aa8.12□□□□□ -1.11
SCAF8-206ENST00000479234 PLEKHF1Q96S99 279 aa8.12□□□□□ -1.11
SCAF8-206ENST00000479234 EYA1Q99502 592 aa8.12□□□□□ -1.11
SCAF8-206ENST00000479234 NPDC1Q9NQX5 325 aaPredicted RBP8.12□□□□□ -1.11
SCAF8-206ENST00000479234 DLC1Q96QB1 1528 aa8.12□□□□□ -1.11
SCAF8-206ENST00000479234 SHPRHQ149N8 1683 aa8.11□□□□□ -1.11
SCAF8-206ENST00000479234 ALKQ9UM73 1620 aa8.11□□□□□ -1.11
SCAF8-206ENST00000479234 CANXP27824 592 aaKnown RBP8.11□□□□□ -1.11
SCAF8-206ENST00000479234 SAFB2Q14151 953 aaKnown RBP eCLIP8.11□□□□□ -1.11
SCAF8-206ENST00000479234 NEUROD2Q15784 382 aa8.11□□□□□ -1.11
SCAF8-206ENST00000479234 PMFBP1Q8TBY8 1022 aa8.11□□□□□ -1.11
SCAF8-206ENST00000479234 CLUAP1Q96AJ1 413 aa8.11□□□□□ -1.11
SCAF8-206ENST00000479234 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
SCAF8-206ENST00000479234 PNPLA6Q8IY17 1366 aa8.1□□□□□ -1.11
SCAF8-206ENST00000479234 DIAPH1O60610 1272 aaKnown RBP8.1□□□□□ -1.11
SCAF8-206ENST00000479234 TMPOP42166 694 aaKnown RBP8.1□□□□□ -1.11
SCAF8-206ENST00000479234 SPRYD7Q5W111 196 aa8.1□□□□□ -1.11
SCAF8-206ENST00000479234 ZNF598Q86UK7 904 aaKnown RBP8.1□□□□□ -1.11
SCAF8-206ENST00000479234 EMID1Q96A84 441 aaPredicted RBP8.1□□□□□ -1.11
SCAF8-206ENST00000479234 GGNBP2Q9H3C7 697 aa8.1□□□□□ -1.11
SCAF8-206ENST00000479234 CABP1Q9NZU7 370 aa8.1□□□□□ -1.11
SCAF8-206ENST00000479234 RRP7AQ9Y3A4 280 aaKnown RBP8.1□□□□□ -1.11
SCAF8-206ENST00000479234 A2ML1A8K2U0 1454 aa8.1□□□□□ -1.11
SCAF8-206ENST00000479234 RIMS2Q9UQ26 1411 aa8.1□□□□□ -1.11
SCAF8-206ENST00000479234 SPATA31D1Q6ZQQ2 1576 aa8.1□□□□□ -1.11
SCAF8-206ENST00000479234 DIP2BQ9P265 1576 aa8.1□□□□□ -1.11
SCAF8-206ENST00000479234 CLTCQ00610 1675 aaKnown RBP8.09□□□□□ -1.11
SCAF8-206ENST00000479234 CD163L1Q9NR16 1453 aa8.09□□□□□ -1.11
SCAF8-206ENST00000479234 FCHSD2O94868 740 aa8.09□□□□□ -1.11
SCAF8-206ENST00000479234 IGHDP01880 384 aa8.09□□□□□ -1.11
SCAF8-206ENST00000479234 BLOC1S3Q6QNY0 202 aa8.09□□□□□ -1.11
SCAF8-206ENST00000479234 NPM2Q86SE8 214 aaKnown RBP8.09□□□□□ -1.11
SCAF8-206ENST00000479234 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
SCAF8-206ENST00000479234 MAPK8IP3Q9UPT6 1336 aa8.08□□□□□ -1.12
SCAF8-206ENST00000479234 COL3A1P02461 1466 aaPredicted RBP8.08□□□□□ -1.12
SCAF8-206ENST00000479234 SEMA3EO15041 775 aa8.08□□□□□ -1.12
SCAF8-206ENST00000479234 U2SURPO15042 1029 aaKnown RBP8.08□□□□□ -1.12
SCAF8-206ENST00000479234 PPM1GO15355 546 aaPredicted RBP8.08□□□□□ -1.12
SCAF8-206ENST00000479234 TLL1O43897 1013 aa8.08□□□□□ -1.12
SCAF8-206ENST00000479234 ZKSCAN2Q63HK3 967 aa8.08□□□□□ -1.12
SCAF8-206ENST00000479234 PANK1Q8TE04 598 aa8.08□□□□□ -1.12
SCAF8-206ENST00000479234 RWDD1Q9H446 243 aaPredicted RBP8.08□□□□□ -1.12
SCAF8-206ENST00000479234 ESF1Q9H501 851 aaKnown RBP8.08□□□□□ -1.12
SCAF8-206ENST00000479234 ZMYM3Q14202 1370 aa8.08□□□□□ -1.12
SCAF8-206ENST00000479234 RIMBP3CA6NJZ7 1639 aa8.07□□□□□ -1.12
SCAF8-206ENST00000479234 RIMBP3BA6NNM3 1639 aa8.07□□□□□ -1.12
SCAF8-206ENST00000479234 RIMBP3Q9UFD9 1639 aa8.07□□□□□ -1.12
SCAF8-206ENST00000479234 ATP7BP35670 1465 aa8.07□□□□□ -1.12
SCAF8-206ENST00000479234 NLRP1Q9C000 1473 aa8.07□□□□□ -1.12
SCAF8-206ENST00000479234 ADGRB2O60241 1585 aa8.07□□□□□ -1.12
SCAF8-206ENST00000479234 WASLO00401 505 aaPredicted RBP8.07□□□□□ -1.12
SCAF8-206ENST00000479234 NEFMP07197 916 aa8.07□□□□□ -1.12
SCAF8-206ENST00000479234 DNAJB2P25686 324 aa8.07□□□□□ -1.12
SCAF8-206ENST00000479234 C8orf34Q49A92 452 aa8.07□□□□□ -1.12
SCAF8-206ENST00000479234 FRAT1Q92837 279 aaPredicted RBP8.07□□□□□ -1.12
SCAF8-206ENST00000479234 ZNF428Q96B54 188 aa8.07□□□□□ -1.12
SCAF8-206ENST00000479234 USP35Q9P2H5 1018 aa8.07□□□□□ -1.12
SCAF8-206ENST00000479234 FAM135BQ49AJ0 1406 aa8.06□□□□□ -1.12
SCAF8-206ENST00000479234 RIPK4P57078 832 aa8.06□□□□□ -1.12
SCAF8-206ENST00000479234 CALD1Q05682 793 aaKnown RBP8.06□□□□□ -1.12
SCAF8-206ENST00000479234 KMT5BQ4FZB7 885 aa8.06□□□□□ -1.12
SCAF8-206ENST00000479234 WAPLQ7Z5K2 1190 aa8.06□□□□□ -1.12
SCAF8-206ENST00000479234 DZIP1LQ8IYY4 767 aaKnown RBP8.06□□□□□ -1.12
SCAF8-206ENST00000479234 IPO8O15397 1037 aaKnown RBP8.05□□□□□ -1.12
SCAF8-206ENST00000479234 RGS3P49796 1198 aa8.05□□□□□ -1.12
SCAF8-206ENST00000479234 BRPF1P55201 1214 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms