RNA–Protein interactions for RNA: ENST00000479070.5

CREM-231, Transcript of cAMP responsive element modulator, human

TSL 5 BASIC

Gene CREM, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-231	ENST00000479070	KIF7	Q2M1P5	1343 aa		11.5	□□□□□ -0.57
CREM-231	ENST00000479070	CHD4	Q14839	1912 aa		11.49	□□□□□ -0.57
CREM-231	ENST00000479070	IGSF1	Q8N6C5	1336 aa		11.49	□□□□□ -0.57
CREM-231	ENST00000479070	COL5A3	P25940	1745 aa	Predicted RBP	11.49	□□□□□ -0.57
CREM-231	ENST00000479070	MORC1	Q86VD1	984 aa		11.48	□□□□□ -0.57
CREM-231	ENST00000479070	ARX	Q96QS3	562 aa		11.48	□□□□□ -0.57
CREM-231	ENST00000479070	SYT17	Q9BSW7	474 aa		11.48	□□□□□ -0.57
CREM-231	ENST00000479070	SPG7	Q9UQ90	795 aa		11.48	□□□□□ -0.57
CREM-231	ENST00000479070	SCN11A	Q9UI33	1791 aa		11.48	□□□□□ -0.57
CREM-231	ENST00000479070	PHKG2	P15735	406 aa		11.47	□□□□□ -0.57
CREM-231	ENST00000479070	AEBP1	Q8IUX7	1158 aa		11.47	□□□□□ -0.57
CREM-231	ENST00000479070	KLHL34	Q8N239	644 aa		11.47	□□□□□ -0.57
CREM-231	ENST00000479070	PIGB	Q92521	554 aa		11.47	□□□□□ -0.57
CREM-231	ENST00000479070	NKX1-1	Q15270	411 aa	Predicted RBP	11.46	□□□□□ -0.57
CREM-231	ENST00000479070	MSL1	Q68DK7	614 aa		11.46	□□□□□ -0.57
CREM-231	ENST00000479070	KNSTRN	Q9Y448	316 aa		11.46	□□□□□ -0.57
CREM-231	ENST00000479070	KDM6A	O15550	1401 aa	Predicted RBP	11.45	□□□□□ -0.58
CREM-231	ENST00000479070	YY1	P25490	414 aa		11.45	□□□□□ -0.58
CREM-231	ENST00000479070	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.45	□□□□□ -0.58
CREM-231	ENST00000479070	SMIM5	Q71RC9	77 aa		11.45	□□□□□ -0.58
CREM-231	ENST00000479070	AMIGO3	Q86WK7	504 aa		11.45	□□□□□ -0.58
CREM-231	ENST00000479070	COL23A1	Q86Y22	540 aa	Predicted RBP	11.45	□□□□□ -0.58
CREM-231	ENST00000479070	IFNL2	Q8IZJ0	200 aa		11.45	□□□□□ -0.58
CREM-231	ENST00000479070	TJP1	Q07157	1748 aa		11.45	□□□□□ -0.58
CREM-231	ENST00000479070	MAP3K5	Q99683	1374 aa		11.44	□□□□□ -0.58
CREM-231	ENST00000479070	C4A	P0C0L4	1744 aa		11.44	□□□□□ -0.58
CREM-231	ENST00000479070	ZNF831	Q5JPB2	1677 aa		11.44	□□□□□ -0.58
CREM-231	ENST00000479070	CNGB1	Q14028	1251 aa	Predicted RBP	11.44	□□□□□ -0.58
CREM-231	ENST00000479070	SLC16A10	Q8TF71	515 aa		11.44	□□□□□ -0.58
CREM-231	ENST00000479070	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.44	□□□□□ -0.58	8e-6	■■■□□ 14.7
CREM-231	ENST00000479070	TMOD3	Q9NYL9	352 aa		11.44	□□□□□ -0.58
CREM-231	ENST00000479070	POTEM	A6NI47	508 aa		11.43	□□□□□ -0.58
CREM-231	ENST00000479070	PHF14	O94880	888 aa		11.43	□□□□□ -0.58
CREM-231	ENST00000479070	POLD1	P28340	1107 aa		11.43	□□□□□ -0.58
CREM-231	ENST00000479070	LINC00116	Q8NCU8	138 aa		11.43	□□□□□ -0.58
CREM-231	ENST00000479070	SMARCC1	Q92922	1105 aa	Predicted RBP	11.43	□□□□□ -0.58
CREM-231	ENST00000479070	ASAP1	Q9ULH1	1129 aa		11.43	□□□□□ -0.58
CREM-231	ENST00000479070	MYH14	Q7Z406	1995 aa	Known RBP	11.43	□□□□□ -0.58
CREM-231	ENST00000479070	KDR	P35968	1356 aa		11.42	□□□□□ -0.58
CREM-231	ENST00000479070	PLEKHG2	Q9H7P9	1386 aa		11.42	□□□□□ -0.58
CREM-231	ENST00000479070	ITPK1	Q13572	414 aa		11.42	□□□□□ -0.58
CREM-231	ENST00000479070	CC2D1B	Q5T0F9	858 aa	Known RBP	11.42	□□□□□ -0.58
CREM-231	ENST00000479070	SULT6B1	Q6IMI4	303 aa		11.42	□□□□□ -0.58
CREM-231	ENST00000479070	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.42	□□□□□ -0.58
CREM-231	ENST00000479070	NLGN2	Q8NFZ4	835 aa		11.42	□□□□□ -0.58
CREM-231	ENST00000479070	AK7	Q96M32	723 aa		11.42	□□□□□ -0.58
CREM-231	ENST00000479070	COL3A1	P02461	1466 aa	Predicted RBP	11.41	□□□□□ -0.58
CREM-231	ENST00000479070	LOC102724428	A0A0B4J2F2	783 aa		11.41	□□□□□ -0.58
CREM-231	ENST00000479070	IL13	P35225	146 aa		11.41	□□□□□ -0.58
CREM-231	ENST00000479070	SIK1	P57059	783 aa		11.41	□□□□□ -0.58
CREM-231	ENST00000479070	ATG3	Q9NT62	314 aa		11.41	□□□□□ -0.58
CREM-231	ENST00000479070	CIC	Q96RK0	1608 aa	Predicted RBP	11.41	□□□□□ -0.58
CREM-231	ENST00000479070	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.4	□□□□□ -0.58
CREM-231	ENST00000479070	PELP1	Q8IZL8	1130 aa	Known RBP	11.4	□□□□□ -0.58
CREM-231	ENST00000479070	ADAMTS7	Q9UKP4	1686 aa		11.4	□□□□□ -0.59
CREM-231	ENST00000479070	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.39	□□□□□ -0.59
CREM-231	ENST00000479070	PER1	O15534	1290 aa	Predicted RBP	11.39	□□□□□ -0.59
CREM-231	ENST00000479070	ATP6V1A	P38606	617 aa		11.39	□□□□□ -0.59
CREM-231	ENST00000479070	MTHFS	P49914	203 aa		11.39	□□□□□ -0.59
CREM-231	ENST00000479070	KIAA1551	Q9HCM1	1747 aa		11.39	□□□□□ -0.59
CREM-231	ENST00000479070	CLEC11A	Q9Y240	323 aa		11.39	□□□□□ -0.59
CREM-231	ENST00000479070	GNPAT	O15228	680 aa		11.38	□□□□□ -0.59
CREM-231	ENST00000479070	HMOX1	P09601	288 aa		11.38	□□□□□ -0.59
CREM-231	ENST00000479070	DCAF5	Q96JK2	942 aa		11.38	□□□□□ -0.59
CREM-231	ENST00000479070	SLC4A9	Q96Q91	983 aa		11.38	□□□□□ -0.59
CREM-231	ENST00000479070	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.38	□□□□□ -0.59
CREM-231	ENST00000479070	UBR2	Q8IWV8	1755 aa		11.38	□□□□□ -0.59
CREM-231	ENST00000479070	MRC1	P22897	1456 aa		11.38	□□□□□ -0.59
CREM-231	ENST00000479070	KIF13B	Q9NQT8	1826 aa		11.37	□□□□□ -0.59
CREM-231	ENST00000479070	SIPA1L3	O60292	1781 aa	Predicted RBP	11.37	□□□□□ -0.59
CREM-231	ENST00000479070	ERVV-2	B6SEH9	535 aa		11.37	□□□□□ -0.59
CREM-231	ENST00000479070	HSP90AB1	P08238	724 aa	Known RBP	11.37	□□□□□ -0.59
CREM-231	ENST00000479070	CABP4	P57796	275 aa		11.37	□□□□□ -0.59
CREM-231	ENST00000479070	GPR162	Q16538	588 aa		11.37	□□□□□ -0.59
CREM-231	ENST00000479070	AMOT	Q4VCS5	1084 aa		11.37	□□□□□ -0.59
CREM-231	ENST00000479070	C1orf141	Q5JVX7	400 aa		11.37	□□□□□ -0.59
CREM-231	ENST00000479070	FLAD1	Q8NFF5	587 aa		11.37	□□□□□ -0.59
CREM-231	ENST00000479070	SSFA2	P28290	1259 aa		11.36	□□□□□ -0.59
CREM-231	ENST00000479070	YBX3	P16989	372 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
CREM-231	ENST00000479070	CHADL	Q6NUI6	762 aa		11.35	□□□□□ -0.59
CREM-231	ENST00000479070	POTEG	Q6S5H5	508 aa		11.35	□□□□□ -0.59
CREM-231	ENST00000479070	KCP	Q6ZWJ8	1503 aa		11.35	□□□□□ -0.59
CREM-231	ENST00000479070	NPC1L1	Q9UHC9	1359 aa		11.34	□□□□□ -0.59
CREM-231	ENST00000479070	DIAPH1	O60610	1272 aa	Known RBP	11.34	□□□□□ -0.59
CREM-231	ENST00000479070	PTCD1	O75127	700 aa	Known RBP	11.34	□□□□□ -0.59
CREM-231	ENST00000479070	NFATC2IP	Q8NCF5	419 aa		11.34	□□□□□ -0.59
CREM-231	ENST00000479070	OTUD5	Q96G74	571 aa		11.34	□□□□□ -0.59
CREM-231	ENST00000479070	WWC3	Q9ULE0	1092 aa		11.34	□□□□□ -0.59
CREM-231	ENST00000479070	BRCA1	P38398	1863 aa	Known RBP	11.34	□□□□□ -0.59
CREM-231	ENST00000479070	AKAP4	Q5JQC9	854 aa		11.33	□□□□□ -0.6
CREM-231	ENST00000479070	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.33	□□□□□ -0.6
CREM-231	ENST00000479070	LGR6	Q9HBX8	967 aa		11.33	□□□□□ -0.6
CREM-231	ENST00000479070	CNTNAP4	Q9C0A0	1308 aa		11.33	□□□□□ -0.6
CREM-231	ENST00000479070	U2SURP	O15042	1029 aa	Known RBP	11.32	□□□□□ -0.6
CREM-231	ENST00000479070	HMGB2	P26583	209 aa	Known RBP	11.32	□□□□□ -0.6
CREM-231	ENST00000479070	MTHFSD	Q2M296	383 aa	Known RBP	11.32	□□□□□ -0.6
CREM-231	ENST00000479070	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.32	□□□□□ -0.6
CREM-231	ENST00000479070	AFDN	P55196	1824 aa	Known RBP	11.31	□□□□□ -0.6
CREM-231	ENST00000479070	RTCB	Q9Y3I0	505 aa	Known RBP	11.31	□□□□□ -0.6
CREM-231	ENST00000479070	SPDYE2B	A6NHP3	402 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms