RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 ACSBG1Q96GR2 724 aa17.78■□□□□ 0.44
SMARCAL1-211ENST00000479008 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
SMARCAL1-211ENST00000479008 IFT57Q9NWB7 429 aa17.78■□□□□ 0.44
SMARCAL1-211ENST00000479008 GNAI1P63096 354 aa17.77■□□□□ 0.44
SMARCAL1-211ENST00000479008 NFATC2IPQ8NCF5 419 aa17.77■□□□□ 0.44
SMARCAL1-211ENST00000479008 PAPPAQ13219 1627 aa17.76■□□□□ 0.43
SMARCAL1-211ENST00000479008 BCL9O00512 1426 aa17.76■□□□□ 0.43
SMARCAL1-211ENST00000479008 E9PSI1 815 aa17.76■□□□□ 0.43
SMARCAL1-211ENST00000479008 ZNF853P0CG23 659 aa17.76■□□□□ 0.43
SMARCAL1-211ENST00000479008 SLFN5Q08AF3 891 aa17.76■□□□□ 0.43
SMARCAL1-211ENST00000479008 SYTL4Q96C24 671 aaPredicted RBP17.76■□□□□ 0.43
SMARCAL1-211ENST00000479008 CFAP44Q96MT7 982 aa17.76■□□□□ 0.43
SMARCAL1-211ENST00000479008 TMOD3Q9NYL9 352 aa17.76■□□□□ 0.43
SMARCAL1-211ENST00000479008 MIS18AQ9NYP9 233 aa17.76■□□□□ 0.43
SMARCAL1-211ENST00000479008 PRIM1P49642 420 aaKnown RBP17.75■□□□□ 0.43
SMARCAL1-211ENST00000479008 TSR2Q969E8 191 aaKnown RBP17.75■□□□□ 0.43
SMARCAL1-211ENST00000479008 TSPYL4Q9UJ04 414 aa17.75■□□□□ 0.43
SMARCAL1-211ENST00000479008 BTAF1O14981 1849 aa17.75■□□□□ 0.43
SMARCAL1-211ENST00000479008 BTBD11A6QL63 1104 aa17.74■□□□□ 0.43
SMARCAL1-211ENST00000479008 CHL1O00533 1208 aa17.74■□□□□ 0.43
SMARCAL1-211ENST00000479008 FAM196AQ6ZSG2 479 aa17.74■□□□□ 0.43
SMARCAL1-211ENST00000479008 MYH16Q9H6N6 1097 aa17.74■□□□□ 0.43
SMARCAL1-211ENST00000479008 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
SMARCAL1-211ENST00000479008 FANCIQ9NVI1 1328 aa17.73■□□□□ 0.43
SMARCAL1-211ENST00000479008 BABAM1Q9NWV8 329 aa17.73■□□□□ 0.43
SMARCAL1-211ENST00000479008 UBR2Q8IWV8 1755 aa17.73■□□□□ 0.43
SMARCAL1-211ENST00000479008 KCNQ2O43526 872 aa17.72■□□□□ 0.43
SMARCAL1-211ENST00000479008 TRMT2AQ8IZ69 625 aaKnown RBP17.72■□□□□ 0.43
SMARCAL1-211ENST00000479008 PIGBQ92521 554 aa17.72■□□□□ 0.43
SMARCAL1-211ENST00000479008 KCNQ3O43525 872 aa17.71■□□□□ 0.43
SMARCAL1-211ENST00000479008 SLC39A6Q13433 755 aa17.71■□□□□ 0.43
SMARCAL1-211ENST00000479008 DUSP27Q5VZP5 1158 aa17.71■□□□□ 0.43
SMARCAL1-211ENST00000479008 ZNF790Q6PG37 636 aa17.69■□□□□ 0.42
SMARCAL1-211ENST00000479008 PTF1AQ7RTS3 328 aa17.69■□□□□ 0.42
SMARCAL1-211ENST00000479008 TTC5Q8N0Z6 440 aa17.69■□□□□ 0.42
SMARCAL1-211ENST00000479008 EXOSC9Q06265 439 aaKnown RBP17.68■□□□□ 0.42
SMARCAL1-211ENST00000479008 ATG3Q9NT62 314 aa17.68■□□□□ 0.42
SMARCAL1-211ENST00000479008 ASAP1Q9ULH1 1129 aa17.68■□□□□ 0.42
SMARCAL1-211ENST00000479008 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
SMARCAL1-211ENST00000479008 TRIM37O94972 964 aa17.67■□□□□ 0.42
SMARCAL1-211ENST00000479008 C5P01031 1676 aa17.67■□□□□ 0.42
SMARCAL1-211ENST00000479008 TNS1Q9HBL0 1735 aaKnown RBP17.67■□□□□ 0.42
SMARCAL1-211ENST00000479008 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
SMARCAL1-211ENST00000479008 KRT24Q2M2I5 525 aa17.66■□□□□ 0.42
SMARCAL1-211ENST00000479008 BCL11BQ9C0K0 894 aaPredicted RBP17.66■□□□□ 0.42
SMARCAL1-211ENST00000479008 LY75O60449 1722 aa17.65■□□□□ 0.42
SMARCAL1-211ENST00000479008 C8orf58Q8NAV2 365 aa17.65■□□□□ 0.42
SMARCAL1-211ENST00000479008 LAMB4A4D0S4 1761 aa17.65■□□□□ 0.42
SMARCAL1-211ENST00000479008 ZNF496Q96IT1 587 aaPredicted RBP17.64■□□□□ 0.41
SMARCAL1-211ENST00000479008 FMNL2Q96PY5 1086 aa17.64■□□□□ 0.41
SMARCAL1-211ENST00000479008 ELL2O00472 640 aaPredicted RBP17.63■□□□□ 0.41
SMARCAL1-211ENST00000479008 PTCD1O75127 700 aaKnown RBP17.63■□□□□ 0.41
SMARCAL1-211ENST00000479008 TSPYL6Q8N831 410 aa17.63■□□□□ 0.41
SMARCAL1-211ENST00000479008 SMARCC1Q92922 1105 aaPredicted RBP17.63■□□□□ 0.41
SMARCAL1-211ENST00000479008 EP400Q96L91 3159 aa17.63■□□□□ 0.41
SMARCAL1-211ENST00000479008 PALLDQ8WX93 1383 aa17.63■□□□□ 0.41
SMARCAL1-211ENST00000479008 TJP1Q07157 1748 aa17.62■□□□□ 0.41
SMARCAL1-211ENST00000479008 TWISTNBQ3B726 338 aaPredicted RBP17.62■□□□□ 0.41
SMARCAL1-211ENST00000479008 RBM42Q9BTD8 480 aaKnown RBP17.62■□□□□ 0.41
SMARCAL1-211ENST00000479008 HEG1Q9ULI3 1381 aa17.62■□□□□ 0.41
SMARCAL1-211ENST00000479008 CENPBP07199 599 aaPredicted RBP17.6■□□□□ 0.41
SMARCAL1-211ENST00000479008 ZNF831Q5JPB2 1677 aa17.6■□□□□ 0.41
SMARCAL1-211ENST00000479008 CICQ96RK0 1608 aaPredicted RBP17.59■□□□□ 0.41
SMARCAL1-211ENST00000479008 PRAMEF22A3QJZ6 481 aa17.59■□□□□ 0.41
SMARCAL1-211ENST00000479008 GIGYF1O75420 1035 aaPredicted RBP17.59■□□□□ 0.41
SMARCAL1-211ENST00000479008 SNRPA1P09661 255 aaKnown RBP17.59■□□□□ 0.41
SMARCAL1-211ENST00000479008 TAF1LQ8IZX4 1826 aa17.58■□□□□ 0.41
SMARCAL1-211ENST00000479008 SOS1Q07889 1333 aaPredicted RBP17.58■□□□□ 0.4
SMARCAL1-211ENST00000479008 LOC102724428A0A0B4J2F2 783 aa17.58■□□□□ 0.4
SMARCAL1-211ENST00000479008 VAMP4O75379 141 aa17.58■□□□□ 0.4
SMARCAL1-211ENST00000479008 HOXB7P09629 217 aa17.58■□□□□ 0.4
SMARCAL1-211ENST00000479008 CT47B1P0C2W7 299 aaPredicted RBP17.58■□□□□ 0.4
SMARCAL1-211ENST00000479008 SIK1P57059 783 aa17.58■□□□□ 0.4
SMARCAL1-211ENST00000479008 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.4
SMARCAL1-211ENST00000479008 CACNA1FO60840 1977 aa17.58■□□□□ 0.4
SMARCAL1-211ENST00000479008 RGPD3A6NKT7 1758 aaPredicted RBP17.58■□□□□ 0.4
SMARCAL1-211ENST00000479008 RGPD4Q7Z3J3 1758 aa17.58■□□□□ 0.4
SMARCAL1-211ENST00000479008 COL5A3P25940 1745 aaPredicted RBP17.58■□□□□ 0.4
SMARCAL1-211ENST00000479008 APBA3O96018 575 aa17.57■□□□□ 0.4
SMARCAL1-211ENST00000479008 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
SMARCAL1-211ENST00000479008 EIF2S2P20042 333 aaKnown RBP17.56■□□□□ 0.4
SMARCAL1-211ENST00000479008 ATP6V1AP38606 617 aa17.56■□□□□ 0.4
SMARCAL1-211ENST00000479008 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
SMARCAL1-211ENST00000479008 NECTIN2Q92692 538 aa17.56■□□□□ 0.4
SMARCAL1-211ENST00000479008 HDGFL1Q5TGJ6 251 aa17.55■□□□□ 0.4
SMARCAL1-211ENST00000479008 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
SMARCAL1-211ENST00000479008 TCERG1O14776 1098 aaKnown RBP17.54■□□□□ 0.4
SMARCAL1-211ENST00000479008 TEX13AQ9BXU3 409 aaPredicted RBP17.54■□□□□ 0.4
SMARCAL1-211ENST00000479008 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
SMARCAL1-211ENST00000479008 RCAN3Q9UKA8 241 aa17.54■□□□□ 0.4
SMARCAL1-211ENST00000479008 KCNQ4P56696 695 aa17.53■□□□□ 0.4
SMARCAL1-211ENST00000479008 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
SMARCAL1-211ENST00000479008 ITPK1Q13572 414 aa17.53■□□□□ 0.4
SMARCAL1-211ENST00000479008 CCDC30Q5VVM6 783 aa17.53■□□□□ 0.4
SMARCAL1-211ENST00000479008 ZNF428Q96B54 188 aa17.53■□□□□ 0.4
SMARCAL1-211ENST00000479008 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
SMARCAL1-211ENST00000479008 PLSCR1O15162 318 aa17.52■□□□□ 0.4
SMARCAL1-211ENST00000479008 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
SMARCAL1-211ENST00000479008 SSH1Q8WYL5 1049 aa17.52■□□□□ 0.4
SMARCAL1-211ENST00000479008 BCL2L13Q9BXK5 485 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms