RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 CHL1O00533 1208 aa34.48■■■■□ 3.11
CHKB-208ENST00000479003 TBC1D2Q9BYX2 928 aa34.48■■■■□ 3.11
CHKB-208ENST00000479003 GCC1Q96CN9 775 aa34.47■■■■□ 3.11
CHKB-208ENST00000479003 C22orf23Q9BZE7 217 aa34.47■■■■□ 3.11
CHKB-208ENST00000479003 API5Q9BZZ5 524 aaKnown RBP34.47■■■■□ 3.11
CHKB-208ENST00000479003 COL22A1Q8NFW1 1626 aaPredicted RBP34.47■■■■□ 3.11
CHKB-208ENST00000479003 IL17REQ8NFR9 667 aa34.46■■■■□ 3.11
CHKB-208ENST00000479003 COL5A2P05997 1499 aaPredicted RBP34.46■■■■□ 3.11
CHKB-208ENST00000479003 PLEKHO1Q53GL0 409 aaPredicted RBP34.46■■■■□ 3.11
CHKB-208ENST00000479003 AMOTQ4VCS5 1084 aa34.45■■■■□ 3.1
CHKB-208ENST00000479003 ZNF530Q6P9A1 599 aaPredicted RBP34.45■■■■□ 3.1
CHKB-208ENST00000479003 LNPKQ9C0E8 428 aa34.45■■■■□ 3.1
CHKB-208ENST00000479003 MFAP1P55081 439 aaKnown RBP34.44■■■■□ 3.1
CHKB-208ENST00000479003 ANTXR1Q9H6X2 564 aa34.44■■■■□ 3.1
CHKB-208ENST00000479003 MEGF6O75095 1541 aa34.44■■■■□ 3.1
CHKB-208ENST00000479003 MIS18AQ9NYP9 233 aa34.43■■■■□ 3.1
CHKB-208ENST00000479003 WDR17Q8IZU2 1322 aa34.42■■■■□ 3.1
CHKB-208ENST00000479003 UBAP1LF5GYI3 381 aa34.42■■■■□ 3.1
CHKB-208ENST00000479003 RAPGEF4Q8WZA2 1011 aa34.42■■■■□ 3.1
CHKB-208ENST00000479003 C1orf115Q9H7X2 142 aa34.4■■■■□ 3.1
CHKB-208ENST00000479003 AKAP4Q5JQC9 854 aa34.4■■■■□ 3.1
CHKB-208ENST00000479003 SLKQ9H2G2 1235 aaPredicted RBP34.39■■■■□ 3.1
CHKB-208ENST00000479003 CEMIPQ8WUJ3 1361 aa34.39■■■■□ 3.1
CHKB-208ENST00000479003 KRT24Q2M2I5 525 aa34.39■■■■□ 3.1
CHKB-208ENST00000479003 SIRT2Q8IXJ6 389 aa34.38■■■■□ 3.09
CHKB-208ENST00000479003 LGR6Q9HBX8 967 aa34.38■■■■□ 3.09
CHKB-208ENST00000479003 TSPYL4Q9UJ04 414 aa34.37■■■■□ 3.09
CHKB-208ENST00000479003 BMP2KLQ5H9B9 411 aa34.37■■■■□ 3.09
CHKB-208ENST00000479003 TOM1L2Q6ZVM7 507 aa34.37■■■■□ 3.09
CHKB-208ENST00000479003 ANKRD45Q5TZF3 282 aa34.36■■■■□ 3.09
CHKB-208ENST00000479003 TATP17735 454 aaPredicted RBP34.36■■■■□ 3.09
CHKB-208ENST00000479003 STRN4Q9NRL3 753 aa34.36■■■■□ 3.09
CHKB-208ENST00000479003 C1orf141Q5JVX7 400 aa34.35■■■■□ 3.09
CHKB-208ENST00000479003 MPRIPQ6WCQ1 1025 aa34.34■■■■□ 3.09
CHKB-208ENST00000479003 LARP1Q6PKG0 1096 aaKnown RBP34.33■■■■□ 3.09
CHKB-208ENST00000479003 INTS3Q68E01 1043 aaKnown RBP34.31■■■■□ 3.08
CHKB-208ENST00000479003 BTG4Q9NY30 223 aa34.31■■■■□ 3.08
CHKB-208ENST00000479003 COL14A1Q05707 1796 aaKnown RBP34.3■■■■□ 3.08
CHKB-208ENST00000479003 RBM25P49756 843 aaKnown RBP34.3■■■■□ 3.08
CHKB-208ENST00000479003 TAF7Q15545 349 aaPredicted RBP34.3■■■■□ 3.08
CHKB-208ENST00000479003 RGS12O14924 1447 aa34.3■■■■□ 3.08
CHKB-208ENST00000479003 EVA1CP58658 441 aa34.3■■■■□ 3.08
CHKB-208ENST00000479003 PKD1L3Q7Z443 1732 aa34.29■■■■□ 3.08
CHKB-208ENST00000479003 RNMTO43148 476 aaKnown RBP34.28■■■■□ 3.08
CHKB-208ENST00000479003 CARD10Q9BWT7 1032 aa34.27■■■■□ 3.08
CHKB-208ENST00000479003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.27■■■■□ 3.083e-8■□□□□ 11.2
CHKB-208ENST00000479003 SPG7Q9UQ90 795 aa34.27■■■■□ 3.08
CHKB-208ENST00000479003 OVOS2A0A0G2JMS6 1433 aa34.27■■■■□ 3.08
CHKB-208ENST00000479003 PLEKHG2Q9H7P9 1386 aa34.27■■■■□ 3.08
CHKB-208ENST00000479003 ADAMTS7Q9UKP4 1686 aa34.25■■■■□ 3.07
CHKB-208ENST00000479003 PARP4Q9UKK3 1724 aaKnown RBP34.25■■■■□ 3.07
CHKB-208ENST00000479003 CERKQ8TCT0 537 aa34.24■■■■□ 3.07
CHKB-208ENST00000479003 PHKG2P15735 406 aa34.24■■■■□ 3.07
CHKB-208ENST00000479003 PTPRCP08575 1304 aa34.23■■■■□ 3.07
CHKB-208ENST00000479003 TEFQ10587 303 aa34.23■■■■□ 3.07
CHKB-208ENST00000479003 BABAM1Q9NWV8 329 aa34.23■■■■□ 3.07
CHKB-208ENST00000479003 ADAMTS2O95450 1211 aa34.22■■■■□ 3.07
CHKB-208ENST00000479003 KDM6AO15550 1401 aaPredicted RBP34.21■■■■□ 3.07
CHKB-208ENST00000479003 CYP27B1O15528 508 aa34.21■■■■□ 3.07
CHKB-208ENST00000479003 DCTPP1Q9H773 170 aa34.21■■■■□ 3.07
CHKB-208ENST00000479003 KDM3BQ7LBC6 1761 aa34.2■■■■□ 3.07
CHKB-208ENST00000479003 ATP10DQ9P241 1426 aa34.2■■■■□ 3.06
CHKB-208ENST00000479003 IFNL2Q8IZJ0 200 aa34.19■■■■□ 3.06
CHKB-208ENST00000479003 HSCBQ8IWL3 235 aa34.19■■■■□ 3.06
CHKB-208ENST00000479003 NUTM2BA6NNL0 878 aaPredicted RBP34.18■■■■□ 3.06
CHKB-208ENST00000479003 NUTM2EB1AL46 878 aaPredicted RBP34.18■■■■□ 3.06
CHKB-208ENST00000479003 NUTM2AQ8IVF1 878 aaPredicted RBP34.18■■■■□ 3.06
CHKB-208ENST00000479003 ANKRD44Q8N8A2 993 aa34.18■■■■□ 3.06
CHKB-208ENST00000479003 SCN11AQ9UI33 1791 aa34.18■■■■□ 3.06
CHKB-208ENST00000479003 PLCH1Q4KWH8 1693 aa34.18■■■■□ 3.06
CHKB-208ENST00000479003 PRKCSHP14314 528 aaPredicted RBP34.18■■■■□ 3.06
CHKB-208ENST00000479003 IL2RBP14784 551 aa34.18■■■■□ 3.06
CHKB-208ENST00000479003 SNX21Q969T3 373 aa34.18■■■■□ 3.06
CHKB-208ENST00000479003 SIPA1L3O60292 1781 aaPredicted RBP34.17■■■■□ 3.06
CHKB-208ENST00000479003 BTBD11A6QL63 1104 aa34.16■■■■□ 3.06
CHKB-208ENST00000479003 RPAP2Q8IXW5 612 aaPredicted RBP34.16■■■■□ 3.06
CHKB-208ENST00000479003 CHMP5Q9NZZ3 219 aa34.16■■■■□ 3.06
CHKB-208ENST00000479003 KCNQ3O43525 872 aa34.15■■■■□ 3.06
CHKB-208ENST00000479003 TBC1D9Q6ZT07 1266 aa34.15■■■■□ 3.06
CHKB-208ENST00000479003 SPRYD3Q8NCJ5 442 aa34.15■■■■□ 3.06
CHKB-208ENST00000479003 ZCRB1Q8TBF4 217 aaKnown RBP34.13■■■■□ 3.05
CHKB-208ENST00000479003 SHANK3Q9BYB0 1731 aa34.12■■■■□ 3.05
CHKB-208ENST00000479003 PLEKHM2Q8IWE5 1019 aa34.12■■■■□ 3.05
CHKB-208ENST00000479003 CEP85Q6P2H3 762 aa34.11■■■■□ 3.05
CHKB-208ENST00000479003 PCDH11XQ9BZA7 1347 aa34.1■■■■□ 3.05
CHKB-208ENST00000479003 PCDH11YQ9BZA8 1340 aa34.1■■■■□ 3.05
CHKB-208ENST00000479003 EIF4A1P60842 406 aaKnown RBP34.1■■■■□ 3.05
CHKB-208ENST00000479003 DCAF5Q96JK2 942 aa34.1■■■■□ 3.05
CHKB-208ENST00000479003 CDC45O75419 566 aa34.09■■■■□ 3.05
CHKB-208ENST00000479003 SLC4A2P04920 1241 aa34.09■■■■□ 3.05
CHKB-208ENST00000479003 KIF2CQ99661 725 aa34.09■■■■□ 3.05
CHKB-208ENST00000479003 SLC52A2Q9HAB3 445 aa34.09■■■■□ 3.05
CHKB-208ENST00000479003 NRAPQ86VF7 1730 aa34.09■■■■□ 3.05
CHKB-208ENST00000479003 GSPT1P15170 499 aaKnown RBP34.07■■■■□ 3.05
CHKB-208ENST00000479003 IL27Q8NEV9 243 aa34.07■■■■□ 3.05
CHKB-208ENST00000479003 JCADQ9P266 1359 aa34.07■■■■□ 3.04
CHKB-208ENST00000479003 MRC1P22897 1456 aa34.06■■■■□ 3.04
CHKB-208ENST00000479003 HSP90AB1P08238 724 aaKnown RBP34.06■■■■□ 3.04
CHKB-208ENST00000479003 NFATC2IPQ8NCF5 419 aa34.06■■■■□ 3.04
CHKB-208ENST00000479003 NECTIN2Q92692 538 aa34.05■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms