RNA–Protein interactions for RNA: ENST00000479002.1

CAD-208, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 5

Gene CAD, Length 614 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-208ENST00000479002 ZNF521Q96K83 1311 aa21.15■□□□□ 0.98
CAD-208ENST00000479002 ATG3Q9NT62 314 aa21.15■□□□□ 0.98
CAD-208ENST00000479002 APBA3O96018 575 aa21.14■□□□□ 0.97
CAD-208ENST00000479002 WDR63Q8IWG1 891 aa21.14■□□□□ 0.97
CAD-208ENST00000479002 ASAP1Q9ULH1 1129 aa21.14■□□□□ 0.97
CAD-208ENST00000479002 PLSCR1O15162 318 aa21.13■□□□□ 0.97
CAD-208ENST00000479002 CALD1Q05682 793 aaKnown RBP21.13■□□□□ 0.97
CAD-208ENST00000479002 BABAM1Q9NWV8 329 aa21.13■□□□□ 0.97
CAD-208ENST00000479002 ITGB4P16144 1822 aa21.13■□□□□ 0.97
CAD-208ENST00000479002 BTBD11A6QL63 1104 aa21.12■□□□□ 0.97
CAD-208ENST00000479002 SMARCC1Q92922 1105 aaPredicted RBP21.12■□□□□ 0.97
CAD-208ENST00000479002 IL16Q14005 1332 aa21.11■□□□□ 0.97
CAD-208ENST00000479002 CHL1O00533 1208 aa21.11■□□□□ 0.97
CAD-208ENST00000479002 ZNF853P0CG23 659 aa21.11■□□□□ 0.97
CAD-208ENST00000479002 HNRNPUQ00839 825 aaKnown RBP eCLIP21.11■□□□□ 0.97
CAD-208ENST00000479002 SF3B2Q13435 895 aaKnown RBP21.11■□□□□ 0.97
CAD-208ENST00000479002 CFAP44Q96MT7 982 aa21.11■□□□□ 0.97
CAD-208ENST00000479002 EP400Q96L91 3159 aa21.11■□□□□ 0.97
CAD-208ENST00000479002 TNS1Q9HBL0 1735 aaKnown RBP21.1■□□□□ 0.97
CAD-208ENST00000479002 SLC39A6Q13433 755 aa21.1■□□□□ 0.97
CAD-208ENST00000479002 ZNF790Q6PG37 636 aa21.1■□□□□ 0.97
CAD-208ENST00000479002 IFT57Q9NWB7 429 aa21.1■□□□□ 0.97
CAD-208ENST00000479002 MIS18AQ9NYP9 233 aa21.1■□□□□ 0.97
CAD-208ENST00000479002 SIPA1L3O60292 1781 aaPredicted RBP21.1■□□□□ 0.97
CAD-208ENST00000479002 BTAF1O14981 1849 aa21.09■□□□□ 0.97
CAD-208ENST00000479002 VIRMAQ69YN4 1812 aaKnown RBP21.09■□□□□ 0.97
CAD-208ENST00000479002 PALLDQ8WX93 1383 aa21.09■□□□□ 0.97
CAD-208ENST00000479002 KCNQ3O43525 872 aa21.08■□□□□ 0.97
CAD-208ENST00000479002 BAG6P46379 1132 aa21.08■□□□□ 0.97
CAD-208ENST00000479002 GNAI1P63096 354 aa21.08■□□□□ 0.97
CAD-208ENST00000479002 CAMKK2Q96RR4 588 aa21.07■□□□□ 0.96
CAD-208ENST00000479002 TSPYL4Q9UJ04 414 aa21.07■□□□□ 0.96
CAD-208ENST00000479002 EN1Q05925 392 aaPredicted RBP21.06■□□□□ 0.96
CAD-208ENST00000479002 DEFB132Q7Z7B7 95 aa21.06■□□□□ 0.96
CAD-208ENST00000479002 TTC5Q8N0Z6 440 aa21.06■□□□□ 0.96
CAD-208ENST00000479002 PROM2Q8N271 834 aa21.06■□□□□ 0.96
CAD-208ENST00000479002 LAS1LQ9Y4W2 734 aaKnown RBP21.06■□□□□ 0.96
CAD-208ENST00000479002 PAPPAQ13219 1627 aa21.06■□□□□ 0.96
CAD-208ENST00000479002 SPINK5Q9NQ38 1064 aaPredicted RBP21.05■□□□□ 0.96
CAD-208ENST00000479002 MBIPQ9NS73 344 aa21.05■□□□□ 0.96
CAD-208ENST00000479002 KAT6BQ8WYB5 2073 aa21.05■□□□□ 0.96
CAD-208ENST00000479002 LOC102724428A0A0B4J2F2 783 aa21.04■□□□□ 0.96
CAD-208ENST00000479002 PTCD1O75127 700 aaKnown RBP21.04■□□□□ 0.96
CAD-208ENST00000479002 SIK1P57059 783 aa21.04■□□□□ 0.96
CAD-208ENST00000479002 EIF4A1P60842 406 aaKnown RBP21.04■□□□□ 0.96
CAD-208ENST00000479002 GOLGA2Q08379 1002 aa21.04■□□□□ 0.96
CAD-208ENST00000479002 TXNRD1Q16881 649 aa21.04■□□□□ 0.96
CAD-208ENST00000479002 ZNF496Q96IT1 587 aaPredicted RBP21.04■□□□□ 0.96
CAD-208ENST00000479002 SLC4A9Q96Q91 983 aa21.04■□□□□ 0.96
CAD-208ENST00000479002 KCPQ6ZWJ8 1503 aa21.04■□□□□ 0.96
CAD-208ENST00000479002 ZBED9Q6R2W3 1325 aa21.04■□□□□ 0.96
CAD-208ENST00000479002 EZH2Q15910 746 aaKnown RBP21.03■□□□□ 0.96
CAD-208ENST00000479002 SLC27A3Q5K4L6 730 aa21.03■□□□□ 0.96
CAD-208ENST00000479002 FMNL2Q96PY5 1086 aa21.03■□□□□ 0.96
CAD-208ENST00000479002 RBM42Q9BTD8 480 aaKnown RBP21.03■□□□□ 0.96
CAD-208ENST00000479002 HEG1Q9ULI3 1381 aa21.02■□□□□ 0.96
CAD-208ENST00000479002 VSIG10Q8N0Z9 540 aa21.02■□□□□ 0.96
CAD-208ENST00000479002 SLFN5Q08AF3 891 aa21.01■□□□□ 0.95
CAD-208ENST00000479002 LRRC4BQ9NT99 713 aa21.01■□□□□ 0.95
CAD-208ENST00000479002 CCNL1Q9UK58 526 aaPredicted RBP21.01■□□□□ 0.95
CAD-208ENST00000479002 RGPD3A6NKT7 1758 aaPredicted RBP21■□□□□ 0.95
CAD-208ENST00000479002 KDM3BQ7LBC6 1761 aa21■□□□□ 0.95
CAD-208ENST00000479002 RGPD4Q7Z3J3 1758 aa21■□□□□ 0.95
CAD-208ENST00000479002 E9PSI1 815 aa21■□□□□ 0.95
CAD-208ENST00000479002 SOCS7O14512 581 aa21■□□□□ 0.95
CAD-208ENST00000479002 LY75O60449 1722 aa21■□□□□ 0.95
CAD-208ENST00000479002 ATP6V1AP38606 617 aa20.99■□□□□ 0.95
CAD-208ENST00000479002 ITPK1Q13572 414 aa20.99■□□□□ 0.95
CAD-208ENST00000479002 TRMT2AQ8IZ69 625 aaKnown RBP20.99■□□□□ 0.95
CAD-208ENST00000479002 TSR2Q969E8 191 aaKnown RBP20.99■□□□□ 0.95
CAD-208ENST00000479002 CDCA7LQ96GN5 454 aa20.99■□□□□ 0.95
CAD-208ENST00000479002 MYH16Q9H6N6 1097 aa20.99■□□□□ 0.95
CAD-208ENST00000479002 UBR2Q8IWV8 1755 aa20.99■□□□□ 0.95
CAD-208ENST00000479002 KCNQ4P56696 695 aa20.98■□□□□ 0.95
CAD-208ENST00000479002 FANCIQ9NVI1 1328 aa20.98■□□□□ 0.95
CAD-208ENST00000479002 GIGYF1O75420 1035 aaPredicted RBP20.97■□□□□ 0.95
CAD-208ENST00000479002 SNRPA1P09661 255 aaKnown RBP20.97■□□□□ 0.95
CAD-208ENST00000479002 ZNF831Q5JPB2 1677 aa20.96■□□□□ 0.95
CAD-208ENST00000479002 HMGB2P26583 209 aaKnown RBP20.96■□□□□ 0.95
CAD-208ENST00000479002 DNAJC10Q8IXB1 793 aa20.96■□□□□ 0.95
CAD-208ENST00000479002 TEX13AQ9BXU3 409 aaPredicted RBP20.96■□□□□ 0.95
CAD-208ENST00000479002 KRT24Q2M2I5 525 aa20.95■□□□□ 0.94
CAD-208ENST00000479002 PRAMEF22A3QJZ6 481 aa20.94■□□□□ 0.94
CAD-208ENST00000479002 C8orf58Q8NAV2 365 aa20.94■□□□□ 0.94
CAD-208ENST00000479002 LINC00116Q8NCU8 138 aa20.94■□□□□ 0.94
CAD-208ENST00000479002 USP16Q9Y5T5 823 aa20.94■□□□□ 0.94
CAD-208ENST00000479002 CICQ96RK0 1608 aaPredicted RBP20.93■□□□□ 0.94
CAD-208ENST00000479002 HOXB7P09629 217 aa20.93■□□□□ 0.94
CAD-208ENST00000479002 CYP19A1P11511 503 aaPredicted RBP20.93■□□□□ 0.94
CAD-208ENST00000479002 DUSP27Q5VZP5 1158 aa20.93■□□□□ 0.94
CAD-208ENST00000479002 EXOSC9Q06265 439 aaKnown RBP20.92■□□□□ 0.94
CAD-208ENST00000479002 YTHDC1Q96MU7 727 aaKnown RBP20.92■□□□□ 0.94
CAD-208ENST00000479002 STARD3NLO95772 234 aa20.91■□□□□ 0.94
CAD-208ENST00000479002 SOS1Q07889 1333 aaPredicted RBP20.91■□□□□ 0.94
CAD-208ENST00000479002 RC3H1Q5TC82 1133 aaKnown RBP20.91■□□□□ 0.94
CAD-208ENST00000479002 TSPYL6Q8N831 410 aa20.91■□□□□ 0.94
CAD-208ENST00000479002 RREB1Q92766 1687 aa20.91■□□□□ 0.94
CAD-208ENST00000479002 TJP1Q07157 1748 aa20.9■□□□□ 0.94
CAD-208ENST00000479002 CNTNAP4Q9C0A0 1308 aa20.9■□□□□ 0.94
CAD-208ENST00000479002 ELL2O00472 640 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms