RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 PCNTO95613 3336 aa11.06□□□□□ -0.64
VPS45-208ENST00000478999 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
VPS45-208ENST00000478999 HTRA3P83110 453 aa11.05□□□□□ -0.64
VPS45-208ENST00000478999 NGEFQ8N5V2 710 aa11.05□□□□□ -0.64
VPS45-208ENST00000478999 MEGF6O75095 1541 aa11.04□□□□□ -0.64
VPS45-208ENST00000478999 PRELPP51888 382 aa11.04□□□□□ -0.64
VPS45-208ENST00000478999 JMYQ8N9B5 988 aa11.04□□□□□ -0.64
VPS45-208ENST00000478999 IP6K1Q92551 441 aa11.04□□□□□ -0.64
VPS45-208ENST00000478999 KLRG1Q96E93 195 aa11.04□□□□□ -0.64
VPS45-208ENST00000478999 ARFGEF1Q9Y6D6 1849 aa11.03□□□□□ -0.64
VPS45-208ENST00000478999 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
VPS45-208ENST00000478999 AMIGO3Q86WK7 504 aa11.03□□□□□ -0.64
VPS45-208ENST00000478999 TNS4Q8IZW8 715 aa11.03□□□□□ -0.64
VPS45-208ENST00000478999 NMRK2Q9NPI5 230 aa11.03□□□□□ -0.64
VPS45-208ENST00000478999 GGNBP2Q9H3C7 697 aa11.02□□□□□ -0.65
VPS45-208ENST00000478999 MAP3K19Q56UN5 1328 aa11.02□□□□□ -0.65
VPS45-208ENST00000478999 RTL1A6NKG5 1358 aa11.02□□□□□ -0.65
VPS45-208ENST00000478999 HOXC9P31274 260 aa11.01□□□□□ -0.65
VPS45-208ENST00000478999 SMIM5Q71RC9 77 aa11.01□□□□□ -0.65
VPS45-208ENST00000478999 FLAD1Q8NFF5 587 aa11.01□□□□□ -0.65
VPS45-208ENST00000478999 SBF1O95248 1867 aa11.01□□□□□ -0.65
VPS45-208ENST00000478999 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
VPS45-208ENST00000478999 PXDNLA1KZ92 1463 aa11□□□□□ -0.65
VPS45-208ENST00000478999 VIRMAQ69YN4 1812 aaKnown RBP11□□□□□ -0.65
VPS45-208ENST00000478999 PPP2R1AP30153 589 aa11□□□□□ -0.65
VPS45-208ENST00000478999 RRS1Q15050 365 aaKnown RBP11□□□□□ -0.65
VPS45-208ENST00000478999 CC2D1BQ5T0F9 858 aaKnown RBP11□□□□□ -0.65
VPS45-208ENST00000478999 ZCRB1Q8TBF4 217 aaKnown RBP11□□□□□ -0.65
VPS45-208ENST00000478999 NSD3Q9BZ95 1437 aa11□□□□□ -0.65
VPS45-208ENST00000478999 RBM46Q8TBY0 533 aaKnown RBP10.99□□□□□ -0.65
VPS45-208ENST00000478999 RAPGEF4Q8WZA2 1011 aa10.99□□□□□ -0.65
VPS45-208ENST00000478999 PALLDQ8WX93 1383 aa10.99□□□□□ -0.65
VPS45-208ENST00000478999 PPM1GO15355 546 aaPredicted RBP10.98□□□□□ -0.65
VPS45-208ENST00000478999 PHF14O94880 888 aa10.98□□□□□ -0.65
VPS45-208ENST00000478999 FBLN1P23142 703 aa10.98□□□□□ -0.65
VPS45-208ENST00000478999 WDR43Q15061 677 aaKnown RBP eCLIP10.98□□□□□ -0.65
VPS45-208ENST00000478999 FLT4P35916 1363 aa10.98□□□□□ -0.65
VPS45-208ENST00000478999 FYB1O15117 783 aa10.97□□□□□ -0.65
VPS45-208ENST00000478999 TATP17735 454 aaPredicted RBP10.97□□□□□ -0.65
VPS45-208ENST00000478999 RRP1P56182 461 aaKnown RBP10.97□□□□□ -0.65
VPS45-208ENST00000478999 USHBP1Q8N6Y0 703 aa10.97□□□□□ -0.65
VPS45-208ENST00000478999 AK7Q96M32 723 aa10.97□□□□□ -0.65
VPS45-208ENST00000478999 RCAN3Q9UKA8 241 aa10.97□□□□□ -0.65
VPS45-208ENST00000478999 FANCIQ9NVI1 1328 aa10.97□□□□□ -0.65
VPS45-208ENST00000478999 KCPQ6ZWJ8 1503 aa10.97□□□□□ -0.65
VPS45-208ENST00000478999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.96□□□□□ -0.65
VPS45-208ENST00000478999 IRX6P78412 446 aaPredicted RBP10.96□□□□□ -0.65
VPS45-208ENST00000478999 BCS1LQ9Y276 419 aa10.96□□□□□ -0.65
VPS45-208ENST00000478999 RBM19Q9Y4C8 960 aaKnown RBP10.96□□□□□ -0.65
VPS45-208ENST00000478999 CCDC88AQ3V6T2 1871 aa10.95□□□□□ -0.66
VPS45-208ENST00000478999 CGNL1Q0VF96 1302 aa10.95□□□□□ -0.66
VPS45-208ENST00000478999 FSTL1Q12841 308 aa10.95□□□□□ -0.66
VPS45-208ENST00000478999 CNGB1Q14028 1251 aaPredicted RBP10.95□□□□□ -0.66
VPS45-208ENST00000478999 C4AP0C0L4 1744 aa10.95□□□□□ -0.66
VPS45-208ENST00000478999 C10orf71Q711Q0 1435 aa10.94□□□□□ -0.66
VPS45-208ENST00000478999 KIF24Q5T7B8 1368 aa10.94□□□□□ -0.66
VPS45-208ENST00000478999 PCDH11XQ9BZA7 1347 aa10.94□□□□□ -0.66
VPS45-208ENST00000478999 PCDH11YQ9BZA8 1340 aa10.94□□□□□ -0.66
VPS45-208ENST00000478999 SLC34A2O95436 690 aa10.94□□□□□ -0.66
VPS45-208ENST00000478999 SSFA2P28290 1259 aa10.94□□□□□ -0.66
VPS45-208ENST00000478999 NCBP3Q53F19 620 aaKnown RBP10.94□□□□□ -0.66
VPS45-208ENST00000478999 MPRIPQ6WCQ1 1025 aa10.94□□□□□ -0.66
VPS45-208ENST00000478999 ARHGAP27Q6ZUM4 889 aa10.94□□□□□ -0.66
VPS45-208ENST00000478999 C16orf71Q8IYS4 520 aaPredicted RBP10.94□□□□□ -0.66
VPS45-208ENST00000478999 CCDC136Q96JN2 1154 aa10.94□□□□□ -0.66
VPS45-208ENST00000478999 PLEKHG2Q9H7P9 1386 aa10.93□□□□□ -0.66
VPS45-208ENST00000478999 A0A0G2JLW4 131 aa10.93□□□□□ -0.66
VPS45-208ENST00000478999 HSPA1AP0DMV8 641 aaKnown RBP10.93□□□□□ -0.66
VPS45-208ENST00000478999 HSPA1BP0DMV9 641 aaKnown RBP10.93□□□□□ -0.66
VPS45-208ENST00000478999 NBPF6Q5VWK0 638 aa10.93□□□□□ -0.66
VPS45-208ENST00000478999 LINC00116Q8NCU8 138 aa10.93□□□□□ -0.66
VPS45-208ENST00000478999 NBPF4Q96M43 638 aa10.93□□□□□ -0.66
VPS45-208ENST00000478999 COL5A3P25940 1745 aaPredicted RBP10.92□□□□□ -0.66
VPS45-208ENST00000478999 ZNF521Q96K83 1311 aa10.92□□□□□ -0.66
VPS45-208ENST00000478999 MMP10P09238 476 aa10.92□□□□□ -0.66
VPS45-208ENST00000478999 HMGB2P26583 209 aaKnown RBP10.92□□□□□ -0.66
VPS45-208ENST00000478999 TGFB2P61812 414 aa10.92□□□□□ -0.66
VPS45-208ENST00000478999 HSP90AB2PQ58FF8 381 aa10.92□□□□□ -0.66
VPS45-208ENST00000478999 C9orf131Q5VYM1 1079 aa10.92□□□□□ -0.66
VPS45-208ENST00000478999 ADAMTS8Q9UP79 889 aa10.92□□□□□ -0.66
VPS45-208ENST00000478999 FCHSD2O94868 740 aa10.91□□□□□ -0.66
VPS45-208ENST00000478999 TNNT2P45379 298 aaPredicted RBP10.91□□□□□ -0.66
VPS45-208ENST00000478999 B4GALNT3Q6L9W6 998 aa10.91□□□□□ -0.66
VPS45-208ENST00000478999 EMILIN1Q9Y6C2 1016 aa10.91□□□□□ -0.66
VPS45-208ENST00000478999 MYH14Q7Z406 1995 aaKnown RBP10.9□□□□□ -0.66
VPS45-208ENST00000478999 TIAM2Q8IVF5 1701 aa10.9□□□□□ -0.66
VPS45-208ENST00000478999 CYP27B1O15528 508 aa10.9□□□□□ -0.66
VPS45-208ENST00000478999 DPEP1P16444 411 aa10.9□□□□□ -0.66
VPS45-208ENST00000478999 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.9□□□□□ -0.66
VPS45-208ENST00000478999 SMARCC1Q92922 1105 aaPredicted RBP10.9□□□□□ -0.66
VPS45-208ENST00000478999 RRAGCQ9HB90 399 aa10.9□□□□□ -0.66
VPS45-208ENST00000478999 KDM2BQ8NHM5 1336 aa10.89□□□□□ -0.67
VPS45-208ENST00000478999 GNPATO15228 680 aa10.89□□□□□ -0.67
VPS45-208ENST00000478999 GOLGA2Q08379 1002 aa10.89□□□□□ -0.67
VPS45-208ENST00000478999 ITPK1Q13572 414 aa10.89□□□□□ -0.67
VPS45-208ENST00000478999 PIGBQ92521 554 aa10.89□□□□□ -0.67
VPS45-208ENST00000478999 CARD14Q9BXL6 1004 aa10.89□□□□□ -0.67
VPS45-208ENST00000478999 SPG7Q9UQ90 795 aa10.89□□□□□ -0.67
VPS45-208ENST00000478999 ZNF831Q5JPB2 1677 aa10.89□□□□□ -0.67
VPS45-208ENST00000478999 LOC102724428A0A0B4J2F2 783 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms