RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 PNPLA7Q6ZV29 1317 aa22.63■■□□□ 1.21
CDKN1A-207ENST00000478800 RNMTO43148 476 aaKnown RBP22.63■■□□□ 1.21
CDKN1A-207ENST00000478800 NEFMP07197 916 aa22.63■■□□□ 1.21
CDKN1A-207ENST00000478800 SLC16A10Q8TF71 515 aa22.63■■□□□ 1.21
CDKN1A-207ENST00000478800 RSPH6AQ9H0K4 717 aa22.63■■□□□ 1.21
CDKN1A-207ENST00000478800 FCHSD2O94868 740 aa22.62■■□□□ 1.21
CDKN1A-207ENST00000478800 FLAD1Q8NFF5 587 aa22.62■■□□□ 1.21
CDKN1A-207ENST00000478800 SLC52A2Q9HAB3 445 aa22.62■■□□□ 1.21
CDKN1A-207ENST00000478800 LGR6Q9HBX8 967 aa22.62■■□□□ 1.21
CDKN1A-207ENST00000478800 CASZ1Q86V15 1759 aa22.61■■□□□ 1.21
CDKN1A-207ENST00000478800 GNAT3A8MTJ3 354 aa22.61■■□□□ 1.21
CDKN1A-207ENST00000478800 MAP3K5Q99683 1374 aa22.6■■□□□ 1.21
CDKN1A-207ENST00000478800 PTCD1O75127 700 aaKnown RBP22.59■■□□□ 1.21
CDKN1A-207ENST00000478800 POLD1P28340 1107 aa22.58■■□□□ 1.21
CDKN1A-207ENST00000478800 TEFQ10587 303 aa22.58■■□□□ 1.21
CDKN1A-207ENST00000478800 ITPK1Q13572 414 aa22.58■■□□□ 1.21
CDKN1A-207ENST00000478800 LINC00116Q8NCU8 138 aa22.58■■□□□ 1.21
CDKN1A-207ENST00000478800 PHACTR3Q96KR7 559 aa22.58■■□□□ 1.21
CDKN1A-207ENST00000478800 MYBBP1AQ9BQG0 1328 aaKnown RBP22.57■■□□□ 1.2
CDKN1A-207ENST00000478800 PHF14O94880 888 aa22.57■■□□□ 1.2
CDKN1A-207ENST00000478800 COL23A1Q86Y22 540 aaPredicted RBP22.57■■□□□ 1.2
CDKN1A-207ENST00000478800 PNNQ9H307 717 aaKnown RBP22.57■■□□□ 1.2
CDKN1A-207ENST00000478800 C5P01031 1676 aa22.57■■□□□ 1.2
CDKN1A-207ENST00000478800 GNPATO15228 680 aa22.56■■□□□ 1.2
CDKN1A-207ENST00000478800 PTGER2P43116 358 aa22.56■■□□□ 1.2
CDKN1A-207ENST00000478800 RTF1Q92541 710 aaKnown RBP22.56■■□□□ 1.2
CDKN1A-207ENST00000478800 ARXQ96QS3 562 aa22.54■■□□□ 1.2
CDKN1A-207ENST00000478800 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.53■■□□□ 1.2
CDKN1A-207ENST00000478800 SSFA2P28290 1259 aa22.53■■□□□ 1.2
CDKN1A-207ENST00000478800 TTC5Q8N0Z6 440 aa22.53■■□□□ 1.2
CDKN1A-207ENST00000478800 C4BP0C0L5 1744 aa22.53■■□□□ 1.2
CDKN1A-207ENST00000478800 ZNF316A6NFI3 1004 aaPredicted RBP22.52■■□□□ 1.2
CDKN1A-207ENST00000478800 IL17REQ8NFR9 667 aa22.52■■□□□ 1.2
CDKN1A-207ENST00000478800 SLC4A9Q96Q91 983 aa22.52■■□□□ 1.2
CDKN1A-207ENST00000478800 RTCBQ9Y3I0 505 aaKnown RBP22.52■■□□□ 1.2
CDKN1A-207ENST00000478800 SCN11AQ9UI33 1791 aa22.52■■□□□ 1.2
CDKN1A-207ENST00000478800 MRC1P22897 1456 aa22.52■■□□□ 1.2
CDKN1A-207ENST00000478800 QSER1Q2KHR3 1735 aa22.51■■□□□ 1.19
CDKN1A-207ENST00000478800 SLC39A6Q13433 755 aa22.51■■□□□ 1.19
CDKN1A-207ENST00000478800 MAPK8IP3Q9UPT6 1336 aa22.51■■□□□ 1.19
CDKN1A-207ENST00000478800 DCAF8L1A6NGE4 600 aa22.5■■□□□ 1.19
CDKN1A-207ENST00000478800 RC3H1Q5TC82 1133 aaKnown RBP22.5■■□□□ 1.19
CDKN1A-207ENST00000478800 SGIP1Q9BQI5 828 aa22.5■■□□□ 1.19
CDKN1A-207ENST00000478800 MSL1Q68DK7 614 aa22.49■■□□□ 1.19
CDKN1A-207ENST00000478800 TAF1LQ8IZX4 1826 aa22.49■■□□□ 1.19
CDKN1A-207ENST00000478800 CNTNAP4Q9C0A0 1308 aa22.49■■□□□ 1.19
CDKN1A-207ENST00000478800 TRAPPC3LQ5T215 181 aa22.48■■□□□ 1.19
CDKN1A-207ENST00000478800 KLHL34Q8N239 644 aa22.48■■□□□ 1.19
CDKN1A-207ENST00000478800 PRKRIP1Q9H875 184 aaPredicted RBP22.48■■□□□ 1.19
CDKN1A-207ENST00000478800 HTATSF1O43719 755 aaKnown RBP22.47■■□□□ 1.19
CDKN1A-207ENST00000478800 WDR43Q15061 677 aaKnown RBP eCLIP22.47■■□□□ 1.19
CDKN1A-207ENST00000478800 SMIM5Q71RC9 77 aa22.47■■□□□ 1.19
CDKN1A-207ENST00000478800 FHDC1Q9C0D6 1143 aaPredicted RBP22.47■■□□□ 1.19
CDKN1A-207ENST00000478800 TUBGCP6Q96RT7 1819 aa22.46■■□□□ 1.19
CDKN1A-207ENST00000478800 ADRA2BP18089 450 aa22.46■■□□□ 1.19
CDKN1A-207ENST00000478800 CRKLP46109 303 aaKnown RBP22.46■■□□□ 1.19
CDKN1A-207ENST00000478800 MCM10Q7L590 875 aa22.46■■□□□ 1.19
CDKN1A-207ENST00000478800 AMIGO3Q86WK7 504 aa22.46■■□□□ 1.19
CDKN1A-207ENST00000478800 BTBD11A6QL63 1104 aa22.45■■□□□ 1.18
CDKN1A-207ENST00000478800 RPS6KA4O75676 772 aa22.45■■□□□ 1.18
CDKN1A-207ENST00000478800 DNAJC10Q8IXB1 793 aa22.45■■□□□ 1.18
CDKN1A-207ENST00000478800 VSIG10Q8N0Z9 540 aa22.45■■□□□ 1.18
CDKN1A-207ENST00000478800 CEMIPQ8WUJ3 1361 aa22.45■■□□□ 1.18
CDKN1A-207ENST00000478800 ZNF831Q5JPB2 1677 aa22.45■■□□□ 1.18
CDKN1A-207ENST00000478800 ADAMTS7Q9UKP4 1686 aa22.45■■□□□ 1.18
CDKN1A-207ENST00000478800 ZNF790Q6PG37 636 aa22.44■■□□□ 1.18
CDKN1A-207ENST00000478800 PLEKHF1Q96S99 279 aa22.44■■□□□ 1.18
CDKN1A-207ENST00000478800 RFC4P35249 363 aa22.43■■□□□ 1.18
CDKN1A-207ENST00000478800 NFE2L2Q16236 605 aa22.43■■□□□ 1.18
CDKN1A-207ENST00000478800 SYT17Q9BSW7 474 aa22.43■■□□□ 1.18
CDKN1A-207ENST00000478800 DCTN1Q14203 1278 aa22.42■■□□□ 1.18
CDKN1A-207ENST00000478800 STARD3NLO95772 234 aa22.41■■□□□ 1.18
CDKN1A-207ENST00000478800 ARHGEF1Q92888 912 aaKnown RBP22.41■■□□□ 1.18
CDKN1A-207ENST00000478800 FMNL2Q96PY5 1086 aa22.41■■□□□ 1.18
CDKN1A-207ENST00000478800 CCDC87Q9NVE4 849 aa22.41■■□□□ 1.18
CDKN1A-207ENST00000478800 CYP19A1P11511 503 aaPredicted RBP22.4■■□□□ 1.18
CDKN1A-207ENST00000478800 ZNF496Q96IT1 587 aaPredicted RBP22.4■■□□□ 1.18
CDKN1A-207ENST00000478800 TEX13AQ9BXU3 409 aaPredicted RBP22.4■■□□□ 1.18
CDKN1A-207ENST00000478800 UBR3Q6ZT12 1888 aa22.39■■□□□ 1.18
CDKN1A-207ENST00000478800 INTS5Q6P9B9 1019 aaKnown RBP22.39■■□□□ 1.17
CDKN1A-207ENST00000478800 KCPQ6ZWJ8 1503 aa22.39■■□□□ 1.17
CDKN1A-207ENST00000478800 TAF7Q15545 349 aaPredicted RBP22.38■■□□□ 1.17
CDKN1A-207ENST00000478800 NLGN1Q8N2Q7 840 aa22.38■■□□□ 1.17
CDKN1A-207ENST00000478800 HEG1Q9ULI3 1381 aa22.38■■□□□ 1.17
CDKN1A-207ENST00000478800 YY1P25490 414 aa22.37■■□□□ 1.17
CDKN1A-207ENST00000478800 PNISRQ8TF01 805 aaKnown RBP22.36■■□□□ 1.17
CDKN1A-207ENST00000478800 COL5A3P25940 1745 aaPredicted RBP22.36■■□□□ 1.17
CDKN1A-207ENST00000478800 VIRMAQ69YN4 1812 aaKnown RBP22.36■■□□□ 1.17
CDKN1A-207ENST00000478800 ANP32CO43423 234 aa22.35■■□□□ 1.17
CDKN1A-207ENST00000478800 RIPK4P57078 832 aa22.35■■□□□ 1.17
CDKN1A-207ENST00000478800 LMOD3Q0VAK6 560 aa22.35■■□□□ 1.17
CDKN1A-207ENST00000478800 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
CDKN1A-207ENST00000478800 CCDC146Q8IYE0 955 aa22.35■■□□□ 1.17
CDKN1A-207ENST00000478800 TJP1Q07157 1748 aa22.34■■□□□ 1.17
CDKN1A-207ENST00000478800 KCNQ3O43525 872 aa22.34■■□□□ 1.17
CDKN1A-207ENST00000478800 ZPR1O75312 459 aa22.34■■□□□ 1.17
CDKN1A-207ENST00000478800 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
CDKN1A-207ENST00000478800 RUNDC1Q96C34 613 aa22.34■■□□□ 1.17
CDKN1A-207ENST00000478800 CICQ96RK0 1608 aaPredicted RBP22.33■■□□□ 1.17
CDKN1A-207ENST00000478800 MMP10P09238 476 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms