RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 KDM6AO15550 1401 aaPredicted RBP17.71■□□□□ 0.43
HDAC8-217ENST00000478743 CYP27B1O15528 508 aa17.7■□□□□ 0.42
HDAC8-217ENST00000478743 EDC4Q6P2E9 1401 aaKnown RBP17.7■□□□□ 0.42
HDAC8-217ENST00000478743 COL5A3P25940 1745 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-217ENST00000478743 LOC102724428A0A0B4J2F2 783 aa17.69■□□□□ 0.42
HDAC8-217ENST00000478743 SIK1P57059 783 aa17.69■□□□□ 0.42
HDAC8-217ENST00000478743 POTECB2RU33 542 aa17.68■□□□□ 0.42
HDAC8-217ENST00000478743 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
HDAC8-217ENST00000478743 PCDH11XQ9BZA7 1347 aa17.68■□□□□ 0.42
HDAC8-217ENST00000478743 PCDH11YQ9BZA8 1340 aa17.68■□□□□ 0.42
HDAC8-217ENST00000478743 A0A1W2PP64 1363 aa17.67■□□□□ 0.42
HDAC8-217ENST00000478743 CHRNA5P30532 468 aa17.67■□□□□ 0.42
HDAC8-217ENST00000478743 LBX1P52954 281 aa17.67■□□□□ 0.42
HDAC8-217ENST00000478743 SMARCC1Q92922 1105 aaPredicted RBP17.67■□□□□ 0.42
HDAC8-217ENST00000478743 CNTNAP1P78357 1384 aa17.66■□□□□ 0.42
HDAC8-217ENST00000478743 TNRC18O15417 2968 aaPredicted RBP17.66■□□□□ 0.42
HDAC8-217ENST00000478743 GLTPD2A6NH11 291 aa17.65■□□□□ 0.42
HDAC8-217ENST00000478743 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
HDAC8-217ENST00000478743 POTEJP0CG39 1038 aa17.65■□□□□ 0.42
HDAC8-217ENST00000478743 GYS1P13807 737 aa17.65■□□□□ 0.42
HDAC8-217ENST00000478743 VEGFAP15692 232 aaPredicted RBP17.65■□□□□ 0.42
HDAC8-217ENST00000478743 MLLT1Q03111 559 aaPredicted RBP17.65■□□□□ 0.42
HDAC8-217ENST00000478743 DALRD3Q5D0E6 543 aaKnown RBP17.65■□□□□ 0.42
HDAC8-217ENST00000478743 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
HDAC8-217ENST00000478743 CTCFP49711 727 aaPredicted RBP17.64■□□□□ 0.41
HDAC8-217ENST00000478743 TMF1P82094 1093 aa17.64■□□□□ 0.41
HDAC8-217ENST00000478743 SLC12A5Q9H2X9 1139 aa17.64■□□□□ 0.41
HDAC8-217ENST00000478743 CREBZFQ9NS37 354 aa17.64■□□□□ 0.41
HDAC8-217ENST00000478743 ASAP1Q9ULH1 1129 aa17.64■□□□□ 0.41
HDAC8-217ENST00000478743 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
HDAC8-217ENST00000478743 AMPHP49418 695 aa17.63■□□□□ 0.41
HDAC8-217ENST00000478743 RAPGEF4Q8WZA2 1011 aa17.63■□□□□ 0.41
HDAC8-217ENST00000478743 KDRP35968 1356 aa17.63■□□□□ 0.41
HDAC8-217ENST00000478743 DLEC1Q9Y238 1755 aa17.63■□□□□ 0.41
HDAC8-217ENST00000478743 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
HDAC8-217ENST00000478743 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
HDAC8-217ENST00000478743 HSPA8P11142 646 aaKnown RBP17.61■□□□□ 0.41
HDAC8-217ENST00000478743 ATP6V1AP38606 617 aa17.61■□□□□ 0.41
HDAC8-217ENST00000478743 DDR1Q08345 913 aa17.61■□□□□ 0.41
HDAC8-217ENST00000478743 NLGN1Q8N2Q7 840 aa17.61■□□□□ 0.41
HDAC8-217ENST00000478743 TMC1Q8TDI8 760 aa17.61■□□□□ 0.41
HDAC8-217ENST00000478743 ARHGEF1Q92888 912 aaKnown RBP17.61■□□□□ 0.41
HDAC8-217ENST00000478743 SLC4A9Q96Q91 983 aa17.61■□□□□ 0.41
HDAC8-217ENST00000478743 RRS1Q15050 365 aaKnown RBP17.6■□□□□ 0.41
HDAC8-217ENST00000478743 PARP3Q9Y6F1 533 aa17.6■□□□□ 0.41
HDAC8-217ENST00000478743 ZC3H4Q9UPT8 1303 aaKnown RBP17.6■□□□□ 0.41
HDAC8-217ENST00000478743 ZNF831Q5JPB2 1677 aa17.59■□□□□ 0.41
HDAC8-217ENST00000478743 RTL1A6NKG5 1358 aa17.59■□□□□ 0.41
HDAC8-217ENST00000478743 CCDC85CA6NKD9 419 aa17.59■□□□□ 0.41
HDAC8-217ENST00000478743 HMGB2P26583 209 aaKnown RBP17.59■□□□□ 0.41
HDAC8-217ENST00000478743 VEGFBP49765 207 aa17.59■□□□□ 0.41
HDAC8-217ENST00000478743 RGS19P49795 217 aa17.59■□□□□ 0.41
HDAC8-217ENST00000478743 WBP1LQ9NX94 342 aa17.59■□□□□ 0.41
HDAC8-217ENST00000478743 ADAMTS7Q9UKP4 1686 aa17.58■□□□□ 0.41
HDAC8-217ENST00000478743 TRAPPC3LQ5T215 181 aa17.58■□□□□ 0.4
HDAC8-217ENST00000478743 AIDAQ96BJ3 306 aa17.58■□□□□ 0.4
HDAC8-217ENST00000478743 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.4
HDAC8-217ENST00000478743 HDGFL2Q7Z4V5 671 aaPredicted RBP17.57■□□□□ 0.4
HDAC8-217ENST00000478743 ATG3Q9NT62 314 aa17.57■□□□□ 0.4
HDAC8-217ENST00000478743 SRP68Q9UHB9 627 aaKnown RBP17.57■□□□□ 0.4
HDAC8-217ENST00000478743 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
HDAC8-217ENST00000478743 DICER1Q9UPY3 1922 aaKnown RBP17.57■□□□□ 0.4
HDAC8-217ENST00000478743 LMNB1P20700 586 aa17.56■□□□□ 0.4
HDAC8-217ENST00000478743 CHADLQ6NUI6 762 aa17.55■□□□□ 0.4
HDAC8-217ENST00000478743 ROCK2O75116 1388 aaKnown RBP17.54■□□□□ 0.4
HDAC8-217ENST00000478743 NFKBIEO00221 500 aa17.54■□□□□ 0.4
HDAC8-217ENST00000478743 FKBP8Q14318 412 aa17.54■□□□□ 0.4
HDAC8-217ENST00000478743 NKX1-1Q15270 411 aaPredicted RBP17.54■□□□□ 0.4
HDAC8-217ENST00000478743 SMG6Q86US8 1419 aaKnown RBP17.54■□□□□ 0.4
HDAC8-217ENST00000478743 PASKQ96RG2 1323 aa17.53■□□□□ 0.4
HDAC8-217ENST00000478743 TMOD3Q9NYL9 352 aa17.53■□□□□ 0.4
HDAC8-217ENST00000478743 THSD7BQ9C0I4 1608 aa17.53■□□□□ 0.4
HDAC8-217ENST00000478743 RFC4P35249 363 aa17.52■□□□□ 0.4
HDAC8-217ENST00000478743 HSP90AB2PQ58FF8 381 aa17.52■□□□□ 0.4
HDAC8-217ENST00000478743 COG3Q96JB2 828 aa17.52■□□□□ 0.4
HDAC8-217ENST00000478743 NCAPD2Q15021 1401 aa17.52■□□□□ 0.4
HDAC8-217ENST00000478743 TJP1Q07157 1748 aa17.52■□□□□ 0.39
HDAC8-217ENST00000478743 NRXN2Q9P2S2 1712 aa17.52■□□□□ 0.39
HDAC8-217ENST00000478743 CNTNAP4Q9C0A0 1308 aa17.5■□□□□ 0.39
HDAC8-217ENST00000478743 ADRA2BP18089 450 aa17.5■□□□□ 0.39
HDAC8-217ENST00000478743 L3MBTL2Q969R5 705 aa17.5■□□□□ 0.39
HDAC8-217ENST00000478743 FER1L6Q2WGJ9 1857 aa17.5■□□□□ 0.39
HDAC8-217ENST00000478743 LTBP1Q14766 1721 aa17.5■□□□□ 0.39
HDAC8-217ENST00000478743 POLRMTO00411 1230 aaKnown RBP17.49■□□□□ 0.39
HDAC8-217ENST00000478743 RPS6KA4O75676 772 aa17.49■□□□□ 0.39
HDAC8-217ENST00000478743 INSRP06213 1382 aa17.49■□□□□ 0.39
HDAC8-217ENST00000478743 COL11A2P13942 1736 aaPredicted RBP17.49■□□□□ 0.39
HDAC8-217ENST00000478743 USP42Q9H9J4 1324 aaKnown RBP17.48■□□□□ 0.39
HDAC8-217ENST00000478743 ADAMTSL1Q8N6G6 1762 aa17.48■□□□□ 0.39
HDAC8-217ENST00000478743 TERF2IPQ9NYB0 399 aa17.48■□□□□ 0.39
HDAC8-217ENST00000478743 RC3H1Q5TC82 1133 aaKnown RBP17.47■□□□□ 0.39
HDAC8-217ENST00000478743 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
HDAC8-217ENST00000478743 CARMIL3Q8ND23 1372 aa17.47■□□□□ 0.39
HDAC8-217ENST00000478743 ANKRD31Q8N7Z5 1873 aa17.46■□□□□ 0.39
HDAC8-217ENST00000478743 KIF20BQ96Q89 1820 aa17.46■□□□□ 0.39
HDAC8-217ENST00000478743 PDE4DIPQ5VU43 2346 aa17.46■□□□□ 0.38
HDAC8-217ENST00000478743 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
HDAC8-217ENST00000478743 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
HDAC8-217ENST00000478743 CACNA1SQ13698 1873 aa17.45■□□□□ 0.38
HDAC8-217ENST00000478743 TMEM88BA6NKF7 163 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms