RNA–Protein interactions for RNA: ENST00000478664.3

RN7SL258P-201, Transcript of RNA, 7SL, cytoplasmic 258, pseudogene, humanhuman

BASIC

Gene RN7SL258P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL258P-201ENST00000478664 COL23A1Q86Y22 540 aaPredicted RBP19.13■□□□□ 0.65
RN7SL258P-201ENST00000478664 GAS2L2Q8NHY3 880 aa19.13■□□□□ 0.65
RN7SL258P-201ENST00000478664 AK7Q96M32 723 aa19.13■□□□□ 0.65
RN7SL258P-201ENST00000478664 ARXQ96QS3 562 aa19.13■□□□□ 0.65
RN7SL258P-201ENST00000478664 TAF1LQ8IZX4 1826 aa19.13■□□□□ 0.65
RN7SL258P-201ENST00000478664 RNMTO43148 476 aaKnown RBP19.12■□□□□ 0.65
RN7SL258P-201ENST00000478664 SSFA2P28290 1259 aa19.12■□□□□ 0.65
RN7SL258P-201ENST00000478664 POLD1P28340 1107 aa19.12■□□□□ 0.65
RN7SL258P-201ENST00000478664 SLC52A2Q9HAB3 445 aa19.12■□□□□ 0.65
RN7SL258P-201ENST00000478664 C4BP0C0L5 1744 aa19.11■□□□□ 0.65
RN7SL258P-201ENST00000478664 MAP3K5Q99683 1374 aa19.11■□□□□ 0.65
RN7SL258P-201ENST00000478664 FCHSD2O94868 740 aa19.11■□□□□ 0.65
RN7SL258P-201ENST00000478664 RC3H1Q5TC82 1133 aaKnown RBP19.11■□□□□ 0.65
RN7SL258P-201ENST00000478664 COL24A1Q17RW2 1714 aa19.11■□□□□ 0.65
RN7SL258P-201ENST00000478664 ITPK1Q13572 414 aa19.1■□□□□ 0.65
RN7SL258P-201ENST00000478664 LINC00116Q8NCU8 138 aa19.1■□□□□ 0.65
RN7SL258P-201ENST00000478664 RSPH6AQ9H0K4 717 aa19.1■□□□□ 0.65
RN7SL258P-201ENST00000478664 LGR6Q9HBX8 967 aa19.1■□□□□ 0.65
RN7SL258P-201ENST00000478664 SCN11AQ9UI33 1791 aa19.09■□□□□ 0.65
RN7SL258P-201ENST00000478664 RALBP1Q15311 655 aa19.09■□□□□ 0.65
RN7SL258P-201ENST00000478664 TUBGCP6Q96RT7 1819 aa19.09■□□□□ 0.65
RN7SL258P-201ENST00000478664 MRC1P22897 1456 aa19.09■□□□□ 0.65
RN7SL258P-201ENST00000478664 ADAMTS7Q9UKP4 1686 aa19.08■□□□□ 0.65
RN7SL258P-201ENST00000478664 DCAF8L1A6NGE4 600 aa19.08■□□□□ 0.64
RN7SL258P-201ENST00000478664 GNAT3A8MTJ3 354 aa19.08■□□□□ 0.64
RN7SL258P-201ENST00000478664 MSH5O43196 834 aa19.08■□□□□ 0.64
RN7SL258P-201ENST00000478664 SLC4A9Q96Q91 983 aa19.08■□□□□ 0.64
RN7SL258P-201ENST00000478664 SYT17Q9BSW7 474 aa19.08■□□□□ 0.64
RN7SL258P-201ENST00000478664 RBM42Q9BTD8 480 aaKnown RBP19.08■□□□□ 0.64
RN7SL258P-201ENST00000478664 CNTNAP4Q9C0A0 1308 aa19.07■□□□□ 0.64
RN7SL258P-201ENST00000478664 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
RN7SL258P-201ENST00000478664 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.64
RN7SL258P-201ENST00000478664 FHDC1Q9C0D6 1143 aaPredicted RBP19.07■□□□□ 0.64
RN7SL258P-201ENST00000478664 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.06■□□□□ 0.64
RN7SL258P-201ENST00000478664 ADRA2BP18089 450 aa19.06■□□□□ 0.64
RN7SL258P-201ENST00000478664 PRKAR2BP31323 418 aa19.06■□□□□ 0.64
RN7SL258P-201ENST00000478664 DDX10Q13206 875 aaKnown RBP19.05■□□□□ 0.64
RN7SL258P-201ENST00000478664 RTCBQ9Y3I0 505 aaKnown RBP19.05■□□□□ 0.64
RN7SL258P-201ENST00000478664 GNPATO15228 680 aa19.04■□□□□ 0.64
RN7SL258P-201ENST00000478664 PTCD1O75127 700 aaKnown RBP19.04■□□□□ 0.64
RN7SL258P-201ENST00000478664 VSIG10Q8N0Z9 540 aa19.04■□□□□ 0.64
RN7SL258P-201ENST00000478664 UBR3Q6ZT12 1888 aa19.03■□□□□ 0.64
RN7SL258P-201ENST00000478664 HTATSF1O43719 755 aaKnown RBP19.03■□□□□ 0.64
RN7SL258P-201ENST00000478664 RPS6KA4O75676 772 aa19.03■□□□□ 0.64
RN7SL258P-201ENST00000478664 TRAPPC3LQ5T215 181 aa19.03■□□□□ 0.64
RN7SL258P-201ENST00000478664 AMIGO3Q86WK7 504 aa19.03■□□□□ 0.64
RN7SL258P-201ENST00000478664 IL17REQ8NFR9 667 aa19.03■□□□□ 0.64
RN7SL258P-201ENST00000478664 PHACTR3Q96KR7 559 aa19.03■□□□□ 0.64
RN7SL258P-201ENST00000478664 PNNQ9H307 717 aaKnown RBP19.03■□□□□ 0.64
RN7SL258P-201ENST00000478664 CICQ96RK0 1608 aaPredicted RBP19.03■□□□□ 0.64
RN7SL258P-201ENST00000478664 CEMIPQ8WUJ3 1361 aa19.02■□□□□ 0.64
RN7SL258P-201ENST00000478664 PHF14O94880 888 aa19.01■□□□□ 0.63
RN7SL258P-201ENST00000478664 TEFQ10587 303 aa19.01■□□□□ 0.63
RN7SL258P-201ENST00000478664 NEFMP07197 916 aa19■□□□□ 0.63
RN7SL258P-201ENST00000478664 COL5A3P25940 1745 aaPredicted RBP19■□□□□ 0.63
RN7SL258P-201ENST00000478664 CRKLP46109 303 aaKnown RBP18.99■□□□□ 0.63
RN7SL258P-201ENST00000478664 RTF1Q92541 710 aaKnown RBP18.99■□□□□ 0.63
RN7SL258P-201ENST00000478664 SLC39A6Q13433 755 aa18.98■□□□□ 0.63
RN7SL258P-201ENST00000478664 TTC5Q8N0Z6 440 aa18.98■□□□□ 0.63
RN7SL258P-201ENST00000478664 NLGN1Q8N2Q7 840 aa18.98■□□□□ 0.63
RN7SL258P-201ENST00000478664 ARHGEF1Q92888 912 aaKnown RBP18.98■□□□□ 0.63
RN7SL258P-201ENST00000478664 MYBBP1AQ9BQG0 1328 aaKnown RBP18.98■□□□□ 0.63
RN7SL258P-201ENST00000478664 MSL1Q68DK7 614 aa18.97■□□□□ 0.63
RN7SL258P-201ENST00000478664 ZNF790Q6PG37 636 aa18.97■□□□□ 0.63
RN7SL258P-201ENST00000478664 PLEKHF1Q96S99 279 aa18.97■□□□□ 0.63
RN7SL258P-201ENST00000478664 TEX13AQ9BXU3 409 aaPredicted RBP18.97■□□□□ 0.63
RN7SL258P-201ENST00000478664 CD2APQ9Y5K6 639 aa18.97■□□□□ 0.63
RN7SL258P-201ENST00000478664 KCPQ6ZWJ8 1503 aa18.96■□□□□ 0.63
RN7SL258P-201ENST00000478664 CYP19A1P11511 503 aaPredicted RBP18.96■□□□□ 0.63
RN7SL258P-201ENST00000478664 RFC4P35249 363 aa18.96■□□□□ 0.63
RN7SL258P-201ENST00000478664 INTS5Q6P9B9 1019 aaKnown RBP18.96■□□□□ 0.63
RN7SL258P-201ENST00000478664 VIRMAQ69YN4 1812 aaKnown RBP18.95■□□□□ 0.62
RN7SL258P-201ENST00000478664 SMIM5Q71RC9 77 aa18.95■□□□□ 0.62
RN7SL258P-201ENST00000478664 DNAJC10Q8IXB1 793 aa18.95■□□□□ 0.62
RN7SL258P-201ENST00000478664 CCDC87Q9NVE4 849 aa18.95■□□□□ 0.62
RN7SL258P-201ENST00000478664 TJP1Q07157 1748 aa18.94■□□□□ 0.62
RN7SL258P-201ENST00000478664 BTBD11A6QL63 1104 aa18.93■□□□□ 0.62
RN7SL258P-201ENST00000478664 STARD3NLO95772 234 aa18.93■□□□□ 0.62
RN7SL258P-201ENST00000478664 FMNL2Q96PY5 1086 aa18.93■□□□□ 0.62
RN7SL258P-201ENST00000478664 UTRNP46939 3433 aa18.92■□□□□ 0.62
RN7SL258P-201ENST00000478664 UBR2Q8IWV8 1755 aa18.92■□□□□ 0.62
RN7SL258P-201ENST00000478664 GYS1P13807 737 aa18.92■□□□□ 0.62
RN7SL258P-201ENST00000478664 HEG1Q9ULI3 1381 aa18.92■□□□□ 0.62
RN7SL258P-201ENST00000478664 MYH14Q7Z406 1995 aaKnown RBP18.92■□□□□ 0.62
RN7SL258P-201ENST00000478664 SIPA1L3O60292 1781 aaPredicted RBP18.91■□□□□ 0.62
RN7SL258P-201ENST00000478664 ZNF496Q96IT1 587 aaPredicted RBP18.91■□□□□ 0.62
RN7SL258P-201ENST00000478664 KLHL34Q8N239 644 aa18.9■□□□□ 0.62
RN7SL258P-201ENST00000478664 PRKRIP1Q9H875 184 aaPredicted RBP18.9■□□□□ 0.62
RN7SL258P-201ENST00000478664 SOS1Q07889 1333 aaPredicted RBP18.9■□□□□ 0.62
RN7SL258P-201ENST00000478664 MAPK8IP3Q9UPT6 1336 aa18.9■□□□□ 0.62
RN7SL258P-201ENST00000478664 MMP10P09238 476 aa18.89■□□□□ 0.61
RN7SL258P-201ENST00000478664 NFE2L2Q16236 605 aa18.89■□□□□ 0.61
RN7SL258P-201ENST00000478664 MCM10Q7L590 875 aa18.89■□□□□ 0.61
RN7SL258P-201ENST00000478664 NLGN2Q8NFZ4 835 aa18.89■□□□□ 0.61
RN7SL258P-201ENST00000478664 PNISRQ8TF01 805 aaKnown RBP18.89■□□□□ 0.61
RN7SL258P-201ENST00000478664 USP42Q9H9J4 1324 aaKnown RBP18.89■□□□□ 0.61
RN7SL258P-201ENST00000478664 TAF7Q15545 349 aaPredicted RBP18.88■□□□□ 0.61
RN7SL258P-201ENST00000478664 GPR162Q16538 588 aa18.88■□□□□ 0.61
RN7SL258P-201ENST00000478664 GOLGB1Q14789 3259 aaKnown RBP18.88■□□□□ 0.61
RN7SL258P-201ENST00000478664 ZPR1O75312 459 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms