RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 MAP3K2Q9Y2U5 619 aa14.65□□□□□ -0.06
PCCB-214ENST00000478469 ARHGEF25Q86VW2 580 aa14.64□□□□□ -0.07
PCCB-214ENST00000478469 TSPYL6Q8N831 410 aa14.64□□□□□ -0.07
PCCB-214ENST00000478469 SMARCC1Q92922 1105 aaPredicted RBP14.64□□□□□ -0.07
PCCB-214ENST00000478469 CCDC85AQ96PX6 553 aaPredicted RBP14.64□□□□□ -0.07
PCCB-214ENST00000478469 FSD1Q9BTV5 496 aa14.64□□□□□ -0.07
PCCB-214ENST00000478469 A0A087WZG4 1122 aa14.64□□□□□ -0.07
PCCB-214ENST00000478469 ANKRD13DQ6ZTN6 518 aa14.64□□□□□ -0.07
PCCB-214ENST00000478469 KRT24Q2M2I5 525 aa14.64□□□□□ -0.07
PCCB-214ENST00000478469 GNL2Q13823 731 aaKnown RBP14.63□□□□□ -0.07
PCCB-214ENST00000478469 RNF20Q5VTR2 975 aa14.63□□□□□ -0.07
PCCB-214ENST00000478469 IL1RAPL2Q9NP60 686 aa14.63□□□□□ -0.07
PCCB-214ENST00000478469 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
PCCB-214ENST00000478469 ADGRL3Q9HAR2 1447 aa14.63□□□□□ -0.07
PCCB-214ENST00000478469 WASHC4Q2M389 1173 aa14.63□□□□□ -0.07
PCCB-214ENST00000478469 TRIM35Q9UPQ4 493 aa14.63□□□□□ -0.07
PCCB-214ENST00000478469 CCDC158Q5M9N0 1113 aa14.63□□□□□ -0.07
PCCB-214ENST00000478469 SETD1BQ9UPS6 1966 aaKnown RBP14.62□□□□□ -0.07
PCCB-214ENST00000478469 FBXW7Q969H0 707 aa14.62□□□□□ -0.07
PCCB-214ENST00000478469 COPS6Q7L5N1 327 aa14.62□□□□□ -0.07
PCCB-214ENST00000478469 DNAJC2Q99543 621 aaKnown RBP14.62□□□□□ -0.07
PCCB-214ENST00000478469 LRRFIP2Q9Y608 721 aaKnown RBP14.62□□□□□ -0.07
PCCB-214ENST00000478469 TRMT112Q9UI30 125 aaKnown RBP14.62□□□□□ -0.07
PCCB-214ENST00000478469 SETBP1Q9Y6X0 1596 aa14.62□□□□□ -0.07
PCCB-214ENST00000478469 BRINP3Q76B58 766 aa14.62□□□□□ -0.07
PCCB-214ENST00000478469 FRMPD1Q5SYB0 1578 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 ATP5J2-PTCD1G3V325 749 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 GPTP24298 496 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
PCCB-214ENST00000478469 XAGE3Q8WTP9 111 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 BABAM1Q9NWV8 329 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 MRPL50Q8N5N7 158 aaKnown RBP14.61□□□□□ -0.07
PCCB-214ENST00000478469 TBC1D2BQ9UPU7 963 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 NEXMIFQ5QGS0 1516 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 AACSQ86V21 672 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 AMOTL1Q8IY63 956 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 KIF1BPQ96EK5 621 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 LGR6Q9HBX8 967 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 PIK3C2BO00750 1634 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 KIAA0232Q92628 1395 aa14.61□□□□□ -0.07
PCCB-214ENST00000478469 CHL1O00533 1208 aa14.6□□□□□ -0.07
PCCB-214ENST00000478469 ATP6V1AP38606 617 aa14.6□□□□□ -0.07
PCCB-214ENST00000478469 AK7Q96M32 723 aa14.6□□□□□ -0.07
PCCB-214ENST00000478469 C22orf23Q9BZE7 217 aa14.6□□□□□ -0.07
PCCB-214ENST00000478469 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
PCCB-214ENST00000478469 RIMS1Q86UR5 1692 aaKnown RBP14.6□□□□□ -0.07
PCCB-214ENST00000478469 IGHMBP2P38935 993 aaKnown RBP14.59□□□□□ -0.07
PCCB-214ENST00000478469 ZNF790Q6PG37 636 aa14.59□□□□□ -0.07
PCCB-214ENST00000478469 SOS1Q07889 1333 aaPredicted RBP14.59□□□□□ -0.07
PCCB-214ENST00000478469 TRDNQ13061 729 aa14.59□□□□□ -0.07
PCCB-214ENST00000478469 UBE3BQ7Z3V4 1068 aa14.59□□□□□ -0.07
PCCB-214ENST00000478469 GNL3LQ9NVN8 582 aaKnown RBP14.59□□□□□ -0.07
PCCB-214ENST00000478469 GBP4Q96PP9 640 aa14.59□□□□□ -0.07
PCCB-214ENST00000478469 CWC25Q9NXE8 425 aaPredicted RBP14.59□□□□□ -0.07
PCCB-214ENST00000478469 KIF3AQ9Y496 699 aa14.59□□□□□ -0.07
PCCB-214ENST00000478469 TTC39AQ5SRH9 613 aa14.58□□□□□ -0.07
PCCB-214ENST00000478469 HIP1O00291 1037 aa14.58□□□□□ -0.08
PCCB-214ENST00000478469 KSR2Q6VAB6 950 aa14.58□□□□□ -0.08
PCCB-214ENST00000478469 LAMC1P11047 1609 aa14.58□□□□□ -0.08
PCCB-214ENST00000478469 ADAMTS13Q76LX8 1427 aa14.58□□□□□ -0.08
PCCB-214ENST00000478469 PREX1Q8TCU6 1659 aa14.58□□□□□ -0.08
PCCB-214ENST00000478469 PPP1R1BQ9UD71 204 aaPredicted RBP14.58□□□□□ -0.08
PCCB-214ENST00000478469 KDM4FA0A1W2PPD8 638 aa14.57□□□□□ -0.08
PCCB-214ENST00000478469 RAB11FIP3O75154 756 aa14.57□□□□□ -0.08
PCCB-214ENST00000478469 IFIT5Q13325 482 aaKnown RBP14.57□□□□□ -0.08
PCCB-214ENST00000478469 USP21Q9UK80 565 aa14.57□□□□□ -0.08
PCCB-214ENST00000478469 VWDEQ8N2E2 1590 aa14.57□□□□□ -0.08
PCCB-214ENST00000478469 CHMP4CQ96CF2 233 aa14.57□□□□□ -0.08
PCCB-214ENST00000478469 PIP4K2AP48426 406 aaPredicted RBP14.57□□□□□ -0.08
PCCB-214ENST00000478469 FAM98CQ17RN3 349 aaKnown RBP14.57□□□□□ -0.08
PCCB-214ENST00000478469 BLMP54132 1417 aaPredicted RBP14.57□□□□□ -0.08
PCCB-214ENST00000478469 SPATA31D1Q6ZQQ2 1576 aa14.57□□□□□ -0.08
PCCB-214ENST00000478469 KIF24Q5T7B8 1368 aa14.57□□□□□ -0.08
PCCB-214ENST00000478469 RICTORQ6R327 1708 aa14.56□□□□□ -0.08
PCCB-214ENST00000478469 MEIS3Q99687 375 aa14.56□□□□□ -0.08
PCCB-214ENST00000478469 SLC52A2Q9HAB3 445 aa14.56□□□□□ -0.08
PCCB-214ENST00000478469 SPATA31A3Q5VYP0 1347 aa14.56□□□□□ -0.08
PCCB-214ENST00000478469 METTL24Q5JXM2 366 aa14.56□□□□□ -0.08
PCCB-214ENST00000478469 DDX21Q9NR30 783 aaKnown RBP eCLIP14.56□□□□□ -0.08
PCCB-214ENST00000478469 IGSF1Q8N6C5 1336 aa14.55□□□□□ -0.08
PCCB-214ENST00000478469 ALDH1L1O75891 902 aa14.55□□□□□ -0.08
PCCB-214ENST00000478469 HOXB7P09629 217 aa14.55□□□□□ -0.08
PCCB-214ENST00000478469 RTL1A6NKG5 1358 aa14.55□□□□□ -0.08
PCCB-214ENST00000478469 SYNE3Q6ZMZ3 975 aa14.55□□□□□ -0.08
PCCB-214ENST00000478469 PTCH1Q13635 1447 aa14.55□□□□□ -0.08
PCCB-214ENST00000478469 RFC4P35249 363 aa14.55□□□□□ -0.08
PCCB-214ENST00000478469 CPLX2Q6PUV4 134 aaKnown RBP14.55□□□□□ -0.08
PCCB-214ENST00000478469 LINS1Q8NG48 757 aa14.55□□□□□ -0.08
PCCB-214ENST00000478469 BCL11BQ9C0K0 894 aaPredicted RBP14.55□□□□□ -0.08
PCCB-214ENST00000478469 BCORL1Q5H9F3 1711 aa14.55□□□□□ -0.08
PCCB-214ENST00000478469 ERBB3P21860 1342 aa14.54□□□□□ -0.08
PCCB-214ENST00000478469 DEPDC5O75140 1603 aa14.54□□□□□ -0.08
PCCB-214ENST00000478469 PPP1R42Q7Z4L9 355 aa14.54□□□□□ -0.08
PCCB-214ENST00000478469 SLC4A3P48751 1232 aa14.54□□□□□ -0.08
PCCB-214ENST00000478469 NUTM1Q86Y26 1132 aa14.54□□□□□ -0.08
PCCB-214ENST00000478469 IL17REQ8NFR9 667 aa14.54□□□□□ -0.08
PCCB-214ENST00000478469 FKBP4Q02790 459 aaKnown RBP eCLIP14.53□□□□□ -0.08
PCCB-214ENST00000478469 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.53□□□□□ -0.081e-6■■■□□ 18.1
PCCB-214ENST00000478469 AKAP2Q9Y2D5 859 aa14.53□□□□□ -0.08
PCCB-214ENST00000478469 TULP4Q9NRJ4 1543 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms