RNA–Protein interactions for RNA: ENST00000478404.1

RNF149-204, Transcript of ring finger protein 149, humanhuman

TSL 2

Gene RNF149, Length 997 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-204ENST00000478404 ERVK-9P63128 1117 aa9.19□□□□□ -0.94
RNF149-204ENST00000478404 KCNA1Q09470 495 aa9.19□□□□□ -0.94
RNF149-204ENST00000478404 DNMT3AQ9Y6K1 912 aaPredicted RBP9.19□□□□□ -0.94
RNF149-204ENST00000478404 ADH1CP00326 375 aa9.18□□□□□ -0.94
RNF149-204ENST00000478404 SCARF1Q14162 830 aa9.18□□□□□ -0.94
RNF149-204ENST00000478404 CCDC102BQ68D86 513 aa9.18□□□□□ -0.94
RNF149-204ENST00000478404 CLP1Q92989 425 aaKnown RBP9.18□□□□□ -0.94
RNF149-204ENST00000478404 SOBPA7XYQ1 873 aa9.17□□□□□ -0.94
RNF149-204ENST00000478404 SWI5Q1ZZU3 235 aa9.17□□□□□ -0.94
RNF149-204ENST00000478404 PHLDB3Q6NSJ2 640 aa9.17□□□□□ -0.94
RNF149-204ENST00000478404 GPAT2Q6NUI2 795 aa9.17□□□□□ -0.94
RNF149-204ENST00000478404 TMPRSS4Q9NRS4 437 aa9.17□□□□□ -0.94
RNF149-204ENST00000478404 PATL2C9JE40 543 aaKnown RBP9.16□□□□□ -0.94
RNF149-204ENST00000478404 PPFIA3O75145 1194 aa9.16□□□□□ -0.94
RNF149-204ENST00000478404 NR5A1Q13285 461 aa9.16□□□□□ -0.94
RNF149-204ENST00000478404 TPCN2Q8NHX9 752 aa9.16□□□□□ -0.94
RNF149-204ENST00000478404 ABCC9O60706 1549 aa9.15□□□□□ -0.94
RNF149-204ENST00000478404 MYCP01106 439 aaPredicted RBP9.15□□□□□ -0.94
RNF149-204ENST00000478404 NR3C2P08235 984 aa9.15□□□□□ -0.94
RNF149-204ENST00000478404 SSFA2P28290 1259 aa9.15□□□□□ -0.94
RNF149-204ENST00000478404 SEC13P55735 322 aa9.15□□□□□ -0.94
RNF149-204ENST00000478404 FOXK2Q01167 660 aa9.15□□□□□ -0.94
RNF149-204ENST00000478404 DHX9Q08211 1270 aaKnown RBP9.15□□□□□ -0.94
RNF149-204ENST00000478404 CC2D2BQ6DHV5 1058 aa9.15□□□□□ -0.94
RNF149-204ENST00000478404 ZNF784Q8NCA9 323 aaPredicted RBP9.15□□□□□ -0.94
RNF149-204ENST00000478404 PURBQ96QR8 312 aaKnown RBP9.15□□□□□ -0.94
RNF149-204ENST00000478404 OSBPL3Q9H4L5 887 aa9.15□□□□□ -0.94
RNF149-204ENST00000478404 SFI1A8K8P3 1242 aa9.14□□□□□ -0.95
RNF149-204ENST00000478404 LILRA1O75019 489 aa9.14□□□□□ -0.95
RNF149-204ENST00000478404 KRT76Q01546 638 aa9.14□□□□□ -0.95
RNF149-204ENST00000478404 PPP1R26Q5T8A7 1209 aaPredicted RBP9.14□□□□□ -0.95
RNF149-204ENST00000478404 CCDC116Q8IYX3 515 aa9.14□□□□□ -0.95
RNF149-204ENST00000478404 PSME1Q06323 249 aa9.13□□□□□ -0.95
RNF149-204ENST00000478404 B4GALNT3Q6L9W6 998 aa9.13□□□□□ -0.95
RNF149-204ENST00000478404 CYLDQ9NQC7 956 aa9.13□□□□□ -0.95
RNF149-204ENST00000478404 TMEM229AB2RXF0 380 aa9.12□□□□□ -0.95
RNF149-204ENST00000478404 GNEQ9Y223 722 aaKnown RBP9.12□□□□□ -0.95
RNF149-204ENST00000478404 M0R2N6 131 aa9.11□□□□□ -0.95
RNF149-204ENST00000478404 TIMP2P16035 220 aa9.11□□□□□ -0.95
RNF149-204ENST00000478404 SCNN1DP51172 638 aa9.11□□□□□ -0.95
RNF149-204ENST00000478404 OCLNQ16625 522 aa9.11□□□□□ -0.95
RNF149-204ENST00000478404 KLF16Q9BXK1 252 aaPredicted RBP9.11□□□□□ -0.95
RNF149-204ENST00000478404 GZF1Q9H116 711 aaPredicted RBP9.11□□□□□ -0.95
RNF149-204ENST00000478404 IVNS1ABPQ9Y6Y0 642 aa9.11□□□□□ -0.95
RNF149-204ENST00000478404 WASLO00401 505 aaPredicted RBP9.1□□□□□ -0.95
RNF149-204ENST00000478404 STAU1O95793 577 aaKnown RBP9.1□□□□□ -0.95
RNF149-204ENST00000478404 ATP2B4P23634 1241 aa9.1□□□□□ -0.95
RNF149-204ENST00000478404 ADD1P35611 737 aaKnown RBP9.1□□□□□ -0.95
RNF149-204ENST00000478404 TXNDC2Q86VQ3 553 aa9.1□□□□□ -0.95
RNF149-204ENST00000478404 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
RNF149-204ENST00000478404 RBM19Q9Y4C8 960 aaKnown RBP9.1□□□□□ -0.95
RNF149-204ENST00000478404 NNTQ13423 1086 aa9.09□□□□□ -0.95
RNF149-204ENST00000478404 TRIM52Q96A61 297 aa9.09□□□□□ -0.95
RNF149-204ENST00000478404 ZNF358Q9NW07 568 aa9.09□□□□□ -0.95
RNF149-204ENST00000478404 EMILIN1Q9Y6C2 1016 aa9.09□□□□□ -0.95
RNF149-204ENST00000478404 ZNF385CQ66K41 422 aaPredicted RBP9.08□□□□□ -0.96
RNF149-204ENST00000478404 KANK3Q6NY19 840 aa9.08□□□□□ -0.96
RNF149-204ENST00000478404 GPR161Q8N6U8 529 aaKnown RBP9.08□□□□□ -0.96
RNF149-204ENST00000478404 TSEN2Q8NCE0 465 aaKnown RBP9.08□□□□□ -0.96
RNF149-204ENST00000478404 C1orf216Q8TAB5 229 aa9.08□□□□□ -0.96
RNF149-204ENST00000478404 MAN1A2O60476 641 aa9.07□□□□□ -0.96
RNF149-204ENST00000478404 PRMT3O60678 531 aa9.07□□□□□ -0.96
RNF149-204ENST00000478404 IRS1P35568 1242 aa9.07□□□□□ -0.96
RNF149-204ENST00000478404 GDF10P55107 478 aa9.07□□□□□ -0.96
RNF149-204ENST00000478404 CNTNAP3BQ96NU0 1288 aa9.07□□□□□ -0.96
RNF149-204ENST00000478404 CNTNAP3Q9BZ76 1288 aa9.07□□□□□ -0.96
RNF149-204ENST00000478404 ESF1Q9H501 851 aaKnown RBP9.07□□□□□ -0.96
RNF149-204ENST00000478404 ETNK1Q9HBU6 452 aa9.07□□□□□ -0.96
RNF149-204ENST00000478404 PGPEP1Q9NXJ5 209 aa9.07□□□□□ -0.96
RNF149-204ENST00000478404 CXXC1Q9P0U4 656 aaPredicted RBP9.07□□□□□ -0.96
RNF149-204ENST00000478404 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.06□□□□□ -0.96
RNF149-204ENST00000478404 ADAM23O75077 832 aa9.06□□□□□ -0.96
RNF149-204ENST00000478404 LGR5O75473 907 aa9.06□□□□□ -0.96
RNF149-204ENST00000478404 WEE1P30291 646 aa9.06□□□□□ -0.96
RNF149-204ENST00000478404 WDR4P57081 412 aaKnown RBP9.06□□□□□ -0.96
RNF149-204ENST00000478404 CYP2U1Q7Z449 544 aa9.06□□□□□ -0.96
RNF149-204ENST00000478404 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
RNF149-204ENST00000478404 CCDC9Q9Y3X0 531 aaKnown RBP9.06□□□□□ -0.96
RNF149-204ENST00000478404 ARHGEF15O94989 841 aa9.05□□□□□ -0.96
RNF149-204ENST00000478404 GNRH1P01148 92 aa9.05□□□□□ -0.96
RNF149-204ENST00000478404 INHAP05111 366 aa9.05□□□□□ -0.96
RNF149-204ENST00000478404 SCNN1AP37088 669 aa9.05□□□□□ -0.96
RNF149-204ENST00000478404 EPHA4P54764 986 aa9.05□□□□□ -0.96
RNF149-204ENST00000478404 TAS1R3Q7RTX0 852 aa9.05□□□□□ -0.96
RNF149-204ENST00000478404 KDF1Q8NAX2 398 aaPredicted RBP9.05□□□□□ -0.96
RNF149-204ENST00000478404 KRTAP9-2Q9BYQ4 174 aa9.05□□□□□ -0.96
RNF149-204ENST00000478404 ARID4AP29374 1257 aaPredicted RBP9.04□□□□□ -0.96
RNF149-204ENST00000478404 TMCO4Q5TGY1 634 aa9.04□□□□□ -0.96
RNF149-204ENST00000478404 CCER1Q8TC90 406 aaPredicted RBP9.04□□□□□ -0.96
RNF149-204ENST00000478404 SLC4A9Q96Q91 983 aa9.04□□□□□ -0.96
RNF149-204ENST00000478404 HINFPQ9BQA5 517 aa9.04□□□□□ -0.96
RNF149-204ENST00000478404 ADH1AP07327 375 aa9.03□□□□□ -0.96
RNF149-204ENST00000478404 Q6ZVU0 165 aa9.03□□□□□ -0.96
RNF149-204ENST00000478404 ITPKCQ96DU7 683 aa9.03□□□□□ -0.96
RNF149-204ENST00000478404 BACH1O14867 736 aa9.02□□□□□ -0.97
RNF149-204ENST00000478404 CBLBQ13191 982 aa9.02□□□□□ -0.97
RNF149-204ENST00000478404 SND1Q7KZF4 910 aaKnown RBP eCLIP9.02□□□□□ -0.97
RNF149-204ENST00000478404 TNS4Q8IZW8 715 aa9.02□□□□□ -0.97
RNF149-204ENST00000478404 RAB6BQ9NRW1 208 aa9.02□□□□□ -0.97
RNF149-204ENST00000478404 IL2RAP01589 272 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms