RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 CWC27Q6UX04 472 aaKnown RBP14.33□□□□□ -0.11
SGSM3-209ENST00000478085 PPP1R42Q7Z4L9 355 aa14.33□□□□□ -0.11
SGSM3-209ENST00000478085 CCDC8Q9H0W5 538 aaPredicted RBP14.33□□□□□ -0.11
SGSM3-209ENST00000478085 TRMT112Q9UI30 125 aaKnown RBP14.33□□□□□ -0.12
SGSM3-209ENST00000478085 DDB1Q16531 1140 aa14.33□□□□□ -0.12
SGSM3-209ENST00000478085 TTC39AQ5SRH9 613 aa14.33□□□□□ -0.12
SGSM3-209ENST00000478085 PRKCSHP14314 528 aaPredicted RBP14.33□□□□□ -0.12
SGSM3-209ENST00000478085 GSE1Q14687 1217 aa14.33□□□□□ -0.12
SGSM3-209ENST00000478085 KIF3AQ9Y496 699 aa14.33□□□□□ -0.12
SGSM3-209ENST00000478085 DDX49Q9Y6V7 483 aaKnown RBP14.33□□□□□ -0.12
SGSM3-209ENST00000478085 TSHZ3Q63HK5 1081 aa14.32□□□□□ -0.12
SGSM3-209ENST00000478085 PHAXQ9H814 394 aaKnown RBP14.32□□□□□ -0.12
SGSM3-209ENST00000478085 CHMP5Q9NZZ3 219 aa14.32□□□□□ -0.12
SGSM3-209ENST00000478085 IQGAP3Q86VI3 1631 aa14.32□□□□□ -0.12
SGSM3-209ENST00000478085 CPLX1O14810 134 aa14.32□□□□□ -0.12
SGSM3-209ENST00000478085 RAD21O60216 631 aa14.32□□□□□ -0.12
SGSM3-209ENST00000478085 SYNE3Q6ZMZ3 975 aa14.32□□□□□ -0.12
SGSM3-209ENST00000478085 BOLA2Q9H3K6 86 aa14.32□□□□□ -0.12
SGSM3-209ENST00000478085 TBC1D2BQ9UPU7 963 aa14.32□□□□□ -0.12
SGSM3-209ENST00000478085 TET3O43151 1660 aa14.32□□□□□ -0.12
SGSM3-209ENST00000478085 MX1P20591 662 aa14.32□□□□□ -0.12
SGSM3-209ENST00000478085 G2E3Q7L622 706 aa14.32□□□□□ -0.12
SGSM3-209ENST00000478085 VPS37CA5D8V6 355 aaPredicted RBP14.31□□□□□ -0.12
SGSM3-209ENST00000478085 RNMTO43148 476 aaKnown RBP14.31□□□□□ -0.12
SGSM3-209ENST00000478085 SF3A1Q15459 793 aaKnown RBP14.31□□□□□ -0.12
SGSM3-209ENST00000478085 RALYLQ86SE5 291 aaKnown RBP14.31□□□□□ -0.12
SGSM3-209ENST00000478085 MAP3K5Q99683 1374 aa14.31□□□□□ -0.12
SGSM3-209ENST00000478085 PIK3R4Q99570 1358 aa14.31□□□□□ -0.12
SGSM3-209ENST00000478085 FOSBP53539 338 aa14.31□□□□□ -0.12
SGSM3-209ENST00000478085 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.31□□□□□ -0.12
SGSM3-209ENST00000478085 PPP1R1BQ9UD71 204 aaPredicted RBP14.31□□□□□ -0.12
SGSM3-209ENST00000478085 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
SGSM3-209ENST00000478085 L1TD1Q5T7N2 865 aaKnown RBP14.3□□□□□ -0.12
SGSM3-209ENST00000478085 A2ML1A8K2U0 1454 aa14.3□□□□□ -0.12
SGSM3-209ENST00000478085 CLTCL1P53675 1640 aa14.3□□□□□ -0.12
SGSM3-209ENST00000478085 CHL1O00533 1208 aa14.3□□□□□ -0.12
SGSM3-209ENST00000478085 CPLX2Q6PUV4 134 aaKnown RBP14.3□□□□□ -0.12
SGSM3-209ENST00000478085 DCAF5Q96JK2 942 aa14.3□□□□□ -0.12
SGSM3-209ENST00000478085 SMC3Q9UQE7 1217 aa14.3□□□□□ -0.12
SGSM3-209ENST00000478085 METTL24Q5JXM2 366 aa14.3□□□□□ -0.12
SGSM3-209ENST00000478085 DNTTIP2Q5QJE6 756 aaKnown RBP14.3□□□□□ -0.12
SGSM3-209ENST00000478085 NFXL1Q6ZNB6 911 aa14.3□□□□□ -0.12
SGSM3-209ENST00000478085 KIF1BO60333 1816 aa14.29□□□□□ -0.12
SGSM3-209ENST00000478085 NLRP1Q9C000 1473 aa14.29□□□□□ -0.12
SGSM3-209ENST00000478085 ZPR1O75312 459 aa14.29□□□□□ -0.12
SGSM3-209ENST00000478085 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
SGSM3-209ENST00000478085 AKAP17AQ02040 695 aaKnown RBP14.29□□□□□ -0.12
SGSM3-209ENST00000478085 CWF19L2Q2TBE0 894 aaKnown RBP14.29□□□□□ -0.12
SGSM3-209ENST00000478085 NPHP4O75161 1426 aaPredicted RBP14.28□□□□□ -0.12
SGSM3-209ENST00000478085 SF3B2Q13435 895 aaKnown RBP14.28□□□□□ -0.12
SGSM3-209ENST00000478085 TEX13AQ9BXU3 409 aaPredicted RBP14.28□□□□□ -0.12
SGSM3-209ENST00000478085 RIMBP3CA6NJZ7 1639 aa14.28□□□□□ -0.12
SGSM3-209ENST00000478085 RIMBP3BA6NNM3 1639 aa14.28□□□□□ -0.12
SGSM3-209ENST00000478085 RIMBP3Q9UFD9 1639 aa14.28□□□□□ -0.12
SGSM3-209ENST00000478085 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
SGSM3-209ENST00000478085 PTMSP20962 102 aa14.27□□□□□ -0.12
SGSM3-209ENST00000478085 AMOTL1Q8IY63 956 aa14.27□□□□□ -0.12
SGSM3-209ENST00000478085 HIP1O00291 1037 aa14.27□□□□□ -0.12
SGSM3-209ENST00000478085 RAB11FIP3O75154 756 aa14.27□□□□□ -0.12
SGSM3-209ENST00000478085 KDM4AO75164 1064 aa14.27□□□□□ -0.12
SGSM3-209ENST00000478085 KSR2Q6VAB6 950 aa14.27□□□□□ -0.12
SGSM3-209ENST00000478085 SYAP1Q96A49 352 aaPredicted RBP14.27□□□□□ -0.12
SGSM3-209ENST00000478085 RNF17Q9BXT8 1623 aaKnown RBP14.27□□□□□ -0.13
SGSM3-209ENST00000478085 GLRX3O76003 335 aaKnown RBP14.27□□□□□ -0.13
SGSM3-209ENST00000478085 CWC25Q9NXE8 425 aaPredicted RBP14.26□□□□□ -0.13
SGSM3-209ENST00000478085 MTMR7Q9Y216 660 aa14.26□□□□□ -0.13
SGSM3-209ENST00000478085 ZNF652Q9Y2D9 606 aa14.26□□□□□ -0.13
SGSM3-209ENST00000478085 IDH1O75874 414 aaKnown RBP14.26□□□□□ -0.13
SGSM3-209ENST00000478085 ZNF790Q6PG37 636 aa14.26□□□□□ -0.13
SGSM3-209ENST00000478085 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
SGSM3-209ENST00000478085 RABEP1Q15276 862 aa14.26□□□□□ -0.13
SGSM3-209ENST00000478085 RRP12Q5JTH9 1297 aaKnown RBP14.26□□□□□ -0.13
SGSM3-209ENST00000478085 C16orf71Q8IYS4 520 aaPredicted RBP14.26□□□□□ -0.13
SGSM3-209ENST00000478085 IL17REQ8NFR9 667 aa14.26□□□□□ -0.13
SGSM3-209ENST00000478085 ATP6V1DQ9Y5K8 247 aa14.26□□□□□ -0.13
SGSM3-209ENST00000478085 ZNF335Q9H4Z2 1342 aaPredicted RBP14.26□□□□□ -0.13
SGSM3-209ENST00000478085 ATP6V1AP38606 617 aa14.26□□□□□ -0.13
SGSM3-209ENST00000478085 ZBTB40Q9NUA8 1239 aa14.26□□□□□ -0.13
SGSM3-209ENST00000478085 DDX11L8A8MPP1 907 aa14.25□□□□□ -0.13
SGSM3-209ENST00000478085 ABCF2Q9UG63 623 aa14.25□□□□□ -0.13
SGSM3-209ENST00000478085 UNC13BO14795 1591 aa14.25□□□□□ -0.13
SGSM3-209ENST00000478085 PSMA5P28066 241 aa14.25□□□□□ -0.13
SGSM3-209ENST00000478085 DRC7Q8IY82 874 aa14.25□□□□□ -0.13
SGSM3-209ENST00000478085 ANKRD44Q8N8A2 993 aa14.25□□□□□ -0.13
SGSM3-209ENST00000478085 GOLGA6L3A6NEY3 463 aa14.25□□□□□ -0.13
SGSM3-209ENST00000478085 HDAC1Q13547 482 aaPredicted RBP14.25□□□□□ -0.13
SGSM3-209ENST00000478085 LDHAL6AQ6ZMR3 332 aa14.25□□□□□ -0.13
SGSM3-209ENST00000478085 UPF3BQ9BZI7 483 aaKnown RBP14.25□□□□□ -0.13
SGSM3-209ENST00000478085 KDM5AP29375 1690 aaKnown RBP14.24□□□□□ -0.13
SGSM3-209ENST00000478085 GNL3LQ9NVN8 582 aaKnown RBP14.24□□□□□ -0.13
SGSM3-209ENST00000478085 ERICH2A1L162 156 aa14.24□□□□□ -0.13
SGSM3-209ENST00000478085 GRM8O00222 908 aa14.24□□□□□ -0.13
SGSM3-209ENST00000478085 PHF14O94880 888 aa14.24□□□□□ -0.13
SGSM3-209ENST00000478085 NFKBIBQ15653 356 aa14.24□□□□□ -0.13
SGSM3-209ENST00000478085 HSP90AB3PQ58FF7 597 aa14.24□□□□□ -0.13
SGSM3-209ENST00000478085 RASSF8Q8NHQ8 419 aa14.24□□□□□ -0.13
SGSM3-209ENST00000478085 CSPP1Q1MSJ5 1256 aa14.24□□□□□ -0.13
SGSM3-209ENST00000478085 KCNQ3O43525 872 aa14.23□□□□□ -0.13
SGSM3-209ENST00000478085 DHX16O60231 1041 aaKnown RBP14.23□□□□□ -0.13
SGSM3-209ENST00000478085 NUCB2P80303 420 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms