RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 NFAT5O94916 1531 aa13.03□□□□□ -0.32
MINDY3-206ENST00000477891 GCP02774 474 aa13.02□□□□□ -0.32
MINDY3-206ENST00000477891 HDGFL1Q5TGJ6 251 aa13.02□□□□□ -0.32
MINDY3-206ENST00000477891 KCNH5Q8NCM2 988 aa13.02□□□□□ -0.32
MINDY3-206ENST00000477891 USP44Q9H0E7 712 aa13.02□□□□□ -0.32
MINDY3-206ENST00000477891 EIF2S2P20042 333 aaKnown RBP13.02□□□□□ -0.33
MINDY3-206ENST00000477891 PDE1AP54750 535 aa13.02□□□□□ -0.33
MINDY3-206ENST00000477891 TSHZ3Q63HK5 1081 aa13.02□□□□□ -0.33
MINDY3-206ENST00000477891 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
MINDY3-206ENST00000477891 HSP90AB1P08238 724 aaKnown RBP13.01□□□□□ -0.33
MINDY3-206ENST00000477891 EIF4A1P60842 406 aaKnown RBP13.01□□□□□ -0.33
MINDY3-206ENST00000477891 ATP8B2P98198 1209 aa13.01□□□□□ -0.33
MINDY3-206ENST00000477891 LTN1O94822 1766 aa13.01□□□□□ -0.33
MINDY3-206ENST00000477891 GNAI3P08754 354 aa13.01□□□□□ -0.33
MINDY3-206ENST00000477891 LMOD2Q6P5Q4 547 aa13.01□□□□□ -0.33
MINDY3-206ENST00000477891 MPRIPQ6WCQ1 1025 aa13.01□□□□□ -0.33
MINDY3-206ENST00000477891 LRRFIP2Q9Y608 721 aaKnown RBP13.01□□□□□ -0.33
MINDY3-206ENST00000477891 K7ELQ4 463 aaPredicted RBP13□□□□□ -0.33
MINDY3-206ENST00000477891 ARHGEF25Q86VW2 580 aa13□□□□□ -0.33
MINDY3-206ENST00000477891 OSBPL3Q9H4L5 887 aa13□□□□□ -0.33
MINDY3-206ENST00000477891 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
MINDY3-206ENST00000477891 SOS1Q07889 1333 aaPredicted RBP13□□□□□ -0.33
MINDY3-206ENST00000477891 NPHP4O75161 1426 aaPredicted RBP12.99□□□□□ -0.33
MINDY3-206ENST00000477891 ANXA1P04083 346 aa12.99□□□□□ -0.33
MINDY3-206ENST00000477891 ZNF530Q6P9A1 599 aaPredicted RBP12.99□□□□□ -0.33
MINDY3-206ENST00000477891 CHPF2Q9P2E5 772 aa12.99□□□□□ -0.33
MINDY3-206ENST00000477891 SALL3Q9BXA9 1300 aa12.98□□□□□ -0.33
MINDY3-206ENST00000477891 LRRCC1Q9C099 1032 aa12.98□□□□□ -0.33
MINDY3-206ENST00000477891 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
MINDY3-206ENST00000477891 AKAP4Q5JQC9 854 aa12.97□□□□□ -0.33
MINDY3-206ENST00000477891 TNPO1Q92973 898 aaKnown RBP12.97□□□□□ -0.33
MINDY3-206ENST00000477891 GZF1Q9H116 711 aaPredicted RBP12.97□□□□□ -0.33
MINDY3-206ENST00000477891 FAM208AQ9UK61 1670 aaKnown RBP12.97□□□□□ -0.33
MINDY3-206ENST00000477891 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
MINDY3-206ENST00000477891 HSP90AA1P07900 732 aaKnown RBP12.97□□□□□ -0.33
MINDY3-206ENST00000477891 UBTFL1P0CB47 393 aaPredicted RBP12.97□□□□□ -0.33
MINDY3-206ENST00000477891 TEFQ10587 303 aa12.97□□□□□ -0.33
MINDY3-206ENST00000477891 IBTKQ9P2D0 1353 aaPredicted RBP12.97□□□□□ -0.33
MINDY3-206ENST00000477891 PI4KAP2A4QPH2 592 aa12.96□□□□□ -0.33
MINDY3-206ENST00000477891 TRAK2O60296 914 aa12.96□□□□□ -0.33
MINDY3-206ENST00000477891 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
MINDY3-206ENST00000477891 PLEKHO1Q53GL0 409 aaPredicted RBP12.96□□□□□ -0.33
MINDY3-206ENST00000477891 PROSER2Q86WR7 435 aaPredicted RBP12.96□□□□□ -0.33
MINDY3-206ENST00000477891 PI4KAP1Q8N8J0 262 aa12.96□□□□□ -0.33
MINDY3-206ENST00000477891 ANKRD24Q8TF21 1146 aa12.96□□□□□ -0.33
MINDY3-206ENST00000477891 ZNF142P52746 1687 aaPredicted RBP12.96□□□□□ -0.33
MINDY3-206ENST00000477891 RAB3GAP1Q15042 981 aa12.96□□□□□ -0.34
MINDY3-206ENST00000477891 KRT28Q7Z3Y7 464 aa12.96□□□□□ -0.34
MINDY3-206ENST00000477891 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.34
MINDY3-206ENST00000477891 CACNA1FO60840 1977 aa12.96□□□□□ -0.34
MINDY3-206ENST00000477891 RNMTO43148 476 aaKnown RBP12.95□□□□□ -0.34
MINDY3-206ENST00000477891 MX1P20591 662 aa12.95□□□□□ -0.34
MINDY3-206ENST00000477891 RABEP1Q15276 862 aa12.95□□□□□ -0.34
MINDY3-206ENST00000477891 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
MINDY3-206ENST00000477891 SRCIN1Q9C0H9 1055 aa12.95□□□□□ -0.34
MINDY3-206ENST00000477891 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
MINDY3-206ENST00000477891 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
MINDY3-206ENST00000477891 ADAMTSL3P82987 1691 aa12.95□□□□□ -0.34
MINDY3-206ENST00000477891 ERC2O15083 957 aa12.95□□□□□ -0.34
MINDY3-206ENST00000477891 AMOTQ4VCS5 1084 aa12.95□□□□□ -0.34
MINDY3-206ENST00000477891 BEND3Q5T5X7 828 aa12.95□□□□□ -0.34
MINDY3-206ENST00000477891 PPP1R42Q7Z4L9 355 aa12.95□□□□□ -0.34
MINDY3-206ENST00000477891 SSH3Q8TE77 659 aa12.95□□□□□ -0.34
MINDY3-206ENST00000477891 PRAMEF22A3QJZ6 481 aa12.94□□□□□ -0.34
MINDY3-206ENST00000477891 EIF5BO60841 1220 aaKnown RBP12.94□□□□□ -0.34
MINDY3-206ENST00000477891 REC8O95072 547 aa12.94□□□□□ -0.34
MINDY3-206ENST00000477891 HOXB7P09629 217 aa12.94□□□□□ -0.34
MINDY3-206ENST00000477891 ZC3H6P61129 1189 aaKnown RBP12.94□□□□□ -0.34
MINDY3-206ENST00000477891 UNC5CLQ8IV45 518 aa12.94□□□□□ -0.34
MINDY3-206ENST00000477891 DNAAF4Q8WXU2 420 aa12.94□□□□□ -0.34
MINDY3-206ENST00000477891 PXDNQ92626 1479 aa12.94□□□□□ -0.34
MINDY3-206ENST00000477891 MED1Q15648 1581 aaPredicted RBP12.94□□□□□ -0.34
MINDY3-206ENST00000477891 PROSER3Q2NL68 480 aa12.93□□□□□ -0.34
MINDY3-206ENST00000477891 C1orf141Q5JVX7 400 aa12.93□□□□□ -0.34
MINDY3-206ENST00000477891 DDX17Q92841 729 aaKnown RBP12.93□□□□□ -0.34
MINDY3-206ENST00000477891 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
MINDY3-206ENST00000477891 SURF6O75683 361 aaKnown RBP12.93□□□□□ -0.34
MINDY3-206ENST00000477891 POLA2Q14181 598 aa12.93□□□□□ -0.34
MINDY3-206ENST00000477891 RILPL2Q969X0 211 aa12.93□□□□□ -0.34
MINDY3-206ENST00000477891 STAP2Q9UGK3 403 aa12.93□□□□□ -0.34
MINDY3-206ENST00000477891 PXDNLA1KZ92 1463 aa12.92□□□□□ -0.34
MINDY3-206ENST00000477891 SSFA2P28290 1259 aa12.92□□□□□ -0.34
MINDY3-206ENST00000477891 NUTM1Q86Y26 1132 aa12.92□□□□□ -0.34
MINDY3-206ENST00000477891 ARXQ96QS3 562 aa12.92□□□□□ -0.34
MINDY3-206ENST00000477891 C19orf44Q9H6X5 657 aa12.92□□□□□ -0.34
MINDY3-206ENST00000477891 ADCY9O60503 1353 aa12.92□□□□□ -0.34
MINDY3-206ENST00000477891 TRIM6-TRIM34B2RNG4 842 aa12.91□□□□□ -0.34
MINDY3-206ENST00000477891 SRGAP3O43295 1099 aa12.91□□□□□ -0.34
MINDY3-206ENST00000477891 ESYT1Q9BSJ8 1104 aa12.91□□□□□ -0.34
MINDY3-206ENST00000477891 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
MINDY3-206ENST00000477891 DDX11L8A8MPP1 907 aa12.91□□□□□ -0.34
MINDY3-206ENST00000477891 CHMLP26374 656 aa12.91□□□□□ -0.34
MINDY3-206ENST00000477891 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
MINDY3-206ENST00000477891 SLIT3O75094 1523 aa12.91□□□□□ -0.34
MINDY3-206ENST00000477891 DBF4Q9UBU7 674 aaPredicted RBP12.9□□□□□ -0.34
MINDY3-206ENST00000477891 C1orf167Q5SNV9 1468 aa12.9□□□□□ -0.34
MINDY3-206ENST00000477891 RHPN1Q8TCX5 695 aa12.9□□□□□ -0.34
MINDY3-206ENST00000477891 IL25Q9H293 177 aa12.9□□□□□ -0.34
MINDY3-206ENST00000477891 KDM3BQ7LBC6 1761 aa12.89□□□□□ -0.35
MINDY3-206ENST00000477891 FSD2A1L4K1 749 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms