RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 LTN1O94822 1766 aa10.29□□□□□ -0.76
PTPRD-209ENST00000477552 PDIA4P13667 645 aaKnown RBP10.28□□□□□ -0.76
PTPRD-209ENST00000477552 FBLN1P23142 703 aa10.28□□□□□ -0.76
PTPRD-209ENST00000477552 IP6K1Q92551 441 aa10.28□□□□□ -0.76
PTPRD-209ENST00000477552 LRRCC1Q9C099 1032 aa10.28□□□□□ -0.76
PTPRD-209ENST00000477552 LMO7Q8WWI1 1683 aa10.28□□□□□ -0.76
PTPRD-209ENST00000477552 FSD2A1L4K1 749 aa10.27□□□□□ -0.77
PTPRD-209ENST00000477552 ATP8B2P98198 1209 aa10.27□□□□□ -0.77
PTPRD-209ENST00000477552 FLIIQ13045 1269 aa10.27□□□□□ -0.77
PTPRD-209ENST00000477552 DCTN1Q14203 1278 aa10.27□□□□□ -0.77
PTPRD-209ENST00000477552 ABTB2Q8N961 1025 aa10.27□□□□□ -0.77
PTPRD-209ENST00000477552 IL17RAQ96F46 866 aa10.27□□□□□ -0.77
PTPRD-209ENST00000477552 USP26Q9BXU7 913 aa10.27□□□□□ -0.77
PTPRD-209ENST00000477552 STAP2Q9UGK3 403 aa10.27□□□□□ -0.77
PTPRD-209ENST00000477552 PHF8Q9UPP1 1060 aa10.27□□□□□ -0.77
PTPRD-209ENST00000477552 KIF1AQ12756 1690 aa10.27□□□□□ -0.77
PTPRD-209ENST00000477552 NCKAP5LQ9HCH0 1330 aa10.27□□□□□ -0.77
PTPRD-209ENST00000477552 CEMIPQ8WUJ3 1361 aa10.26□□□□□ -0.77
PTPRD-209ENST00000477552 PLEKHO1Q53GL0 409 aaPredicted RBP10.26□□□□□ -0.77
PTPRD-209ENST00000477552 ANP32BQ92688 251 aaKnown RBP10.26□□□□□ -0.77
PTPRD-209ENST00000477552 KIF2CQ99661 725 aa10.26□□□□□ -0.77
PTPRD-209ENST00000477552 ABCC6O95255 1503 aa10.26□□□□□ -0.77
PTPRD-209ENST00000477552 KDM3BQ7LBC6 1761 aa10.26□□□□□ -0.77
PTPRD-209ENST00000477552 MED1Q15648 1581 aaPredicted RBP10.26□□□□□ -0.77
PTPRD-209ENST00000477552 MST1RQ04912 1400 aa10.25□□□□□ -0.77
PTPRD-209ENST00000477552 GSPT1P15170 499 aaKnown RBP10.25□□□□□ -0.77
PTPRD-209ENST00000477552 FKBP5Q13451 457 aaPredicted RBP10.25□□□□□ -0.77
PTPRD-209ENST00000477552 C1orf115Q9H7X2 142 aa10.25□□□□□ -0.77
PTPRD-209ENST00000477552 TUBGCP6Q96RT7 1819 aa10.25□□□□□ -0.77
PTPRD-209ENST00000477552 NWD1Q149M9 1564 aa10.25□□□□□ -0.77
PTPRD-209ENST00000477552 AK9Q5TCS8 1911 aa10.25□□□□□ -0.77
PTPRD-209ENST00000477552 NFAT5O94916 1531 aa10.24□□□□□ -0.77
PTPRD-209ENST00000477552 UBTFL1P0CB47 393 aaPredicted RBP10.24□□□□□ -0.77
PTPRD-209ENST00000477552 SDSP20132 328 aa10.24□□□□□ -0.77
PTPRD-209ENST00000477552 PDE1AP54750 535 aa10.24□□□□□ -0.77
PTPRD-209ENST00000477552 AKAP4Q5JQC9 854 aa10.24□□□□□ -0.77
PTPRD-209ENST00000477552 PIAS4Q8N2W9 510 aaPredicted RBP10.24□□□□□ -0.77
PTPRD-209ENST00000477552 TNPO1Q92973 898 aaKnown RBP10.24□□□□□ -0.77
PTPRD-209ENST00000477552 INTS4Q96HW7 963 aaKnown RBP10.24□□□□□ -0.77
PTPRD-209ENST00000477552 MEIS3Q99687 375 aa10.24□□□□□ -0.77
PTPRD-209ENST00000477552 CAMTA1Q9Y6Y1 1673 aa10.23□□□□□ -0.77
PTPRD-209ENST00000477552 ALDH1L1O75891 902 aa10.23□□□□□ -0.77
PTPRD-209ENST00000477552 KCNA6P17658 529 aa10.23□□□□□ -0.77
PTPRD-209ENST00000477552 MX1P20591 662 aa10.23□□□□□ -0.77
PTPRD-209ENST00000477552 KLHL40Q2TBA0 621 aa10.23□□□□□ -0.77
PTPRD-209ENST00000477552 SLC4A10Q6U841 1118 aa10.23□□□□□ -0.77
PTPRD-209ENST00000477552 ERC1Q8IUD2 1116 aa10.23□□□□□ -0.77
PTPRD-209ENST00000477552 SSH3Q8TE77 659 aa10.23□□□□□ -0.77
PTPRD-209ENST00000477552 GPATCH3Q96I76 525 aa10.23□□□□□ -0.77
PTPRD-209ENST00000477552 SLIT3O75094 1523 aa10.23□□□□□ -0.77
PTPRD-209ENST00000477552 PSME1Q06323 249 aa10.22□□□□□ -0.77
PTPRD-209ENST00000477552 TEFQ10587 303 aa10.22□□□□□ -0.77
PTPRD-209ENST00000477552 HDGFL1Q5TGJ6 251 aa10.22□□□□□ -0.77
PTPRD-209ENST00000477552 TICAM2Q86XR7 235 aa10.22□□□□□ -0.77
PTPRD-209ENST00000477552 RUFY2Q8WXA3 655 aa10.22□□□□□ -0.77
PTPRD-209ENST00000477552 KIF1BPQ96EK5 621 aa10.22□□□□□ -0.77
PTPRD-209ENST00000477552 HIP1O00291 1037 aa10.21□□□□□ -0.77
PTPRD-209ENST00000477552 C1orf141Q5JVX7 400 aa10.21□□□□□ -0.77
PTPRD-209ENST00000477552 DBF4Q9UBU7 674 aaPredicted RBP10.21□□□□□ -0.77
PTPRD-209ENST00000477552 TTC41PQ6P2S7 1318 aa10.21□□□□□ -0.78
PTPRD-209ENST00000477552 SALL3Q9BXA9 1300 aa10.21□□□□□ -0.78
PTPRD-209ENST00000477552 DDX58O95786 925 aaKnown RBP10.2□□□□□ -0.78
PTPRD-209ENST00000477552 MBD3O95983 291 aa10.2□□□□□ -0.78
PTPRD-209ENST00000477552 CEBPAP49715 358 aaPredicted RBP10.2□□□□□ -0.78
PTPRD-209ENST00000477552 MTX1Q13505 466 aa10.2□□□□□ -0.78
PTPRD-209ENST00000477552 IL17REQ8NFR9 667 aa10.2□□□□□ -0.78
PTPRD-209ENST00000477552 ESYT1Q9BSJ8 1104 aa10.2□□□□□ -0.78
PTPRD-209ENST00000477552 ADAMTSL3P82987 1691 aa10.19□□□□□ -0.78
PTPRD-209ENST00000477552 ADAMTS7Q9UKP4 1686 aa10.19□□□□□ -0.78
PTPRD-209ENST00000477552 USP42Q9H9J4 1324 aaKnown RBP10.19□□□□□ -0.78
PTPRD-209ENST00000477552 NUTM2FA1L443 756 aa10.19□□□□□ -0.78
PTPRD-209ENST00000477552 POLA2Q14181 598 aa10.19□□□□□ -0.78
PTPRD-209ENST00000477552 CNTROBQ8N137 903 aa10.19□□□□□ -0.78
PTPRD-209ENST00000477552 SYAP1Q96A49 352 aaPredicted RBP10.19□□□□□ -0.78
PTPRD-209ENST00000477552 GRPEL1Q9HAV7 217 aa10.19□□□□□ -0.78
PTPRD-209ENST00000477552 HYPKQ9NX55 129 aa10.19□□□□□ -0.78
PTPRD-209ENST00000477552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTPRD-209ENST00000477552 DCCP43146 1447 aa10.18□□□□□ -0.78
PTPRD-209ENST00000477552 BAG4O95429 457 aaKnown RBP10.18□□□□□ -0.78
PTPRD-209ENST00000477552 CYP2E1P05181 493 aaPredicted RBP10.18□□□□□ -0.78
PTPRD-209ENST00000477552 EIF4A1P60842 406 aaKnown RBP10.18□□□□□ -0.78
PTPRD-209ENST00000477552 DNAAF4Q8WXU2 420 aa10.18□□□□□ -0.78
PTPRD-209ENST00000477552 USP44Q9H0E7 712 aa10.18□□□□□ -0.78
PTPRD-209ENST00000477552 NPHP4O75161 1426 aaPredicted RBP10.17□□□□□ -0.78
PTPRD-209ENST00000477552 SIPA1L3O60292 1781 aaPredicted RBP10.17□□□□□ -0.78
PTPRD-209ENST00000477552 SOX12O15370 315 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 FOXO3O43524 673 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 GLRX3O76003 335 aaKnown RBP10.17□□□□□ -0.78
PTPRD-209ENST00000477552 PHF14O94880 888 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 NCLP19338 710 aaKnown RBP10.17□□□□□ -0.78
PTPRD-209ENST00000477552 CHMLP26374 656 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 ZNF445P59923 1031 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 CUL4AQ13619 759 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 CSPP1Q1MSJ5 1256 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 KRT24Q2M2I5 525 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 HS1BP3Q53T59 392 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 KIAA1211Q6ZU35 1233 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 G2E3Q7L622 706 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 SPRYD3Q8NCJ5 442 aa10.17□□□□□ -0.78
PTPRD-209ENST00000477552 TRIM44Q96DX7 344 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms