RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 CDCA7Q9BWT1 371 aaPredicted RBP5.68□□□□□ -1.5
RGPD5-209ENST00000477523 C9orf78Q9NZ63 289 aaPredicted RBP5.68□□□□□ -1.5
RGPD5-209ENST00000477523 RIC3Q7Z5B4 369 aa5.68□□□□□ -1.5
RGPD5-209ENST00000477523 RPAP2Q8IXW5 612 aaPredicted RBP5.68□□□□□ -1.5
RGPD5-209ENST00000477523 C1orf115Q9H7X2 142 aa5.68□□□□□ -1.5
RGPD5-209ENST00000477523 F6X3S4 739 aa5.68□□□□□ -1.5
RGPD5-209ENST00000477523 EIF4A1P60842 406 aaKnown RBP5.68□□□□□ -1.5
RGPD5-209ENST00000477523 SLC52A2Q9HAB3 445 aa5.68□□□□□ -1.5
RGPD5-209ENST00000477523 SNRPA1P09661 255 aaKnown RBP5.68□□□□□ -1.5
RGPD5-209ENST00000477523 BRPF1P55201 1214 aaPredicted RBP5.68□□□□□ -1.5
RGPD5-209ENST00000477523 PTCD1O75127 700 aaKnown RBP5.68□□□□□ -1.5
RGPD5-209ENST00000477523 DDB1Q16531 1140 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 ZNF790Q6PG37 636 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 DNAAF4Q8WXU2 420 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 C8orf37Q96NL8 207 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 RBM19Q9Y4C8 960 aaKnown RBP5.67□□□□□ -1.5
RGPD5-209ENST00000477523 ANKRD45Q5TZF3 282 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 GCC1Q96CN9 775 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 FMN2Q9NZ56 1722 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 NCAPD2Q15021 1401 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 ANXA1P04083 346 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 HYPKQ9NX55 129 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 CHPF2Q9P2E5 772 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 PDZRN3Q9UPQ7 1066 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 ITSN1Q15811 1721 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 CYP27B1O15528 508 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 GNAI2P04899 355 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 PCDHB15Q9Y5E8 787 aa5.67□□□□□ -1.5
RGPD5-209ENST00000477523 MYL6BP14649 208 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 PDE4AP27815 886 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 CRB1P82279 1406 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 KCNQ3O43525 872 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 G2E3Q7L622 706 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 ZNF496Q96IT1 587 aaPredicted RBP5.66□□□□□ -1.5
RGPD5-209ENST00000477523 ZBTB40Q9NUA8 1239 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 PI4KAP2A4QPH2 592 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 FAM161AQ3B820 660 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 INTS3Q68E01 1043 aaKnown RBP5.66□□□□□ -1.5
RGPD5-209ENST00000477523 PI4KAP1Q8N8J0 262 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 LNPKQ9C0E8 428 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 ABCC4O15439 1325 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 ERVV-2B6SEH9 535 aa5.66□□□□□ -1.5
RGPD5-209ENST00000477523 TEX13AQ9BXU3 409 aaPredicted RBP5.66□□□□□ -1.5
RGPD5-209ENST00000477523 IGHDP01880 384 aa5.65□□□□□ -1.5
RGPD5-209ENST00000477523 DDX21Q9NR30 783 aaKnown RBP eCLIP5.65□□□□□ -1.5
RGPD5-209ENST00000477523 EIF5BO60841 1220 aaKnown RBP5.65□□□□□ -1.5
RGPD5-209ENST00000477523 GIGYF1O75420 1035 aaPredicted RBP5.65□□□□□ -1.5
RGPD5-209ENST00000477523 HDAC1Q13547 482 aaPredicted RBP5.65□□□□□ -1.5
RGPD5-209ENST00000477523 PHAXQ9H814 394 aaKnown RBP5.65□□□□□ -1.5
RGPD5-209ENST00000477523 CERKQ8TCT0 537 aa5.65□□□□□ -1.5
RGPD5-209ENST00000477523 KIF1AQ12756 1690 aa5.65□□□□□ -1.51
RGPD5-209ENST00000477523 TOPAZ1Q8N9V7 1692 aa5.65□□□□□ -1.51
RGPD5-209ENST00000477523 CEMIPQ8WUJ3 1361 aa5.65□□□□□ -1.51
RGPD5-209ENST00000477523 MON2Q7Z3U7 1717 aa5.65□□□□□ -1.51
RGPD5-209ENST00000477523 STARD3NLO95772 234 aa5.65□□□□□ -1.51
RGPD5-209ENST00000477523 HSP90AB4PQ58FF6 505 aa5.65□□□□□ -1.51
RGPD5-209ENST00000477523 PXDNQ92626 1479 aa5.65□□□□□ -1.51
RGPD5-209ENST00000477523 ZBTB7BO15156 539 aaPredicted RBP5.64□□□□□ -1.51
RGPD5-209ENST00000477523 CASC1Q6TDU7 716 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 KSR2Q6VAB6 950 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 MEIS3Q99687 375 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 NALCNQ8IZF0 1738 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 ALDH1L1O75891 902 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 KIF20BQ96Q89 1820 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 CHD2O14647 1828 aaKnown RBP5.64□□□□□ -1.51
RGPD5-209ENST00000477523 NFAT5O94916 1531 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 JCADQ9P266 1359 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 SLIT3O75094 1523 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 XAGE3Q8WTP9 111 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 CHMP3Q9Y3E7 222 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 COPS6Q7L5N1 327 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 LINS1Q8NG48 757 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 KDM2BQ8NHM5 1336 aa5.64□□□□□ -1.51
RGPD5-209ENST00000477523 SURF6O75683 361 aaKnown RBP5.63□□□□□ -1.51
RGPD5-209ENST00000477523 SKAP1Q86WV1 359 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 MAP3K2Q9Y2U5 619 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 SHPRHQ149N8 1683 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 ANKRD13DQ6ZTN6 518 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 ANKRD44Q8N8A2 993 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 NRKQ7Z2Y5 1582 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 KIF6Q6ZMV9 814 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 PIK3C2AO00443 1686 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 SRGAP3O43295 1099 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 CHD1LQ86WJ1 897 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 ERBB4Q15303 1308 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 SMC5Q8IY18 1101 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 DDRGK1Q96HY6 314 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 LRRFIP2Q9Y608 721 aaKnown RBP5.63□□□□□ -1.51
RGPD5-209ENST00000477523 PLEKHG2Q9H7P9 1386 aa5.63□□□□□ -1.51
RGPD5-209ENST00000477523 UNC5CLQ8IV45 518 aa5.62□□□□□ -1.51
RGPD5-209ENST00000477523 MYD88Q99836 296 aa5.62□□□□□ -1.51
RGPD5-209ENST00000477523 G3BP1Q13283 466 aaKnown RBP eCLIP5.62□□□□□ -1.51
RGPD5-209ENST00000477523 ZBTB3Q9H5J0 574 aa5.62□□□□□ -1.51
RGPD5-209ENST00000477523 USP21Q9UK80 565 aa5.62□□□□□ -1.51
RGPD5-209ENST00000477523 THRAP3Q9Y2W1 955 aaKnown RBP5.62□□□□□ -1.51
RGPD5-209ENST00000477523 USP16Q9Y5T5 823 aa5.62□□□□□ -1.51
RGPD5-209ENST00000477523 OVOS2A0A0G2JMS6 1433 aa5.62□□□□□ -1.51
RGPD5-209ENST00000477523 MEGF6O75095 1541 aa5.62□□□□□ -1.51
RGPD5-209ENST00000477523 NPHP1O15259 732 aa5.62□□□□□ -1.51
RGPD5-209ENST00000477523 FAM98CQ17RN3 349 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms