RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	INHA	P05111	366 aa		6.32	□□□□□ -1.4
TARDBP-208	ENST00000477447	CLN3	Q13286	438 aa		6.32	□□□□□ -1.4
TARDBP-208	ENST00000477447	SCARF1	Q14162	830 aa		6.32	□□□□□ -1.4
TARDBP-208	ENST00000477447	TMEM164	Q5U3C3	297 aa		6.32	□□□□□ -1.4
TARDBP-208	ENST00000477447	TRIM46	Q7Z4K8	759 aa		6.32	□□□□□ -1.4
TARDBP-208	ENST00000477447	CNKSR1	Q969H4	720 aa		6.32	□□□□□ -1.4
TARDBP-208	ENST00000477447	NLRP3	Q96P20	1036 aa		6.32	□□□□□ -1.4
TARDBP-208	ENST00000477447	INSM2	Q96T92	566 aa	Predicted RBP	6.32	□□□□□ -1.4
TARDBP-208	ENST00000477447	WASL	O00401	505 aa	Predicted RBP	6.31	□□□□□ -1.4
TARDBP-208	ENST00000477447	BACH1	O14867	736 aa		6.31	□□□□□ -1.4
TARDBP-208	ENST00000477447	SPINT1	O43278	529 aa		6.31	□□□□□ -1.4
TARDBP-208	ENST00000477447	TLR1	Q15399	786 aa		6.31	□□□□□ -1.4
TARDBP-208	ENST00000477447	TSEN2	Q8NCE0	465 aa	Known RBP	6.31	□□□□□ -1.4
TARDBP-208	ENST00000477447	ESYT1	Q9BSJ8	1104 aa		6.31	□□□□□ -1.4
TARDBP-208	ENST00000477447	ATP13A2	Q9NQ11	1180 aa		6.31	□□□□□ -1.4
TARDBP-208	ENST00000477447	CARNS1	A5YM72	827 aa		6.3	□□□□□ -1.4
TARDBP-208	ENST00000477447	LGR5	O75473	907 aa		6.3	□□□□□ -1.4
TARDBP-208	ENST00000477447	XAGE2	Q96GT9	111 aa		6.3	□□□□□ -1.4
TARDBP-208	ENST00000477447	DACH1	Q9UI36	760 aa		6.3	□□□□□ -1.4
TARDBP-208	ENST00000477447	CTSO	P43234	321 aa	Predicted RBP	6.29	□□□□□ -1.4
TARDBP-208	ENST00000477447	HOMEZ	Q8IX15	550 aa		6.29	□□□□□ -1.4
TARDBP-208	ENST00000477447	ZFP42	Q96MM3	310 aa		6.29	□□□□□ -1.4
TARDBP-208	ENST00000477447	HINFP	Q9BQA5	517 aa		6.29	□□□□□ -1.4
TARDBP-208	ENST00000477447	UST	Q9Y2C2	406 aa		6.29	□□□□□ -1.4
TARDBP-208	ENST00000477447	TMEM88B	A6NKF7	163 aa		6.28	□□□□□ -1.4
TARDBP-208	ENST00000477447		M0R2N6	131 aa		6.28	□□□□□ -1.4
TARDBP-208	ENST00000477447	SMTN	P53814	917 aa		6.28	□□□□□ -1.4
TARDBP-208	ENST00000477447	SWI5	Q1ZZU3	235 aa		6.28	□□□□□ -1.4
TARDBP-208	ENST00000477447	SLC27A3	Q5K4L6	730 aa		6.28	□□□□□ -1.4
TARDBP-208	ENST00000477447	FOXD4L5	Q5VV16	416 aa	Predicted RBP	6.28	□□□□□ -1.4
TARDBP-208	ENST00000477447	TNS4	Q8IZW8	715 aa		6.28	□□□□□ -1.4
TARDBP-208	ENST00000477447	HRH3	Q9Y5N1	445 aa		6.28	□□□□□ -1.4
TARDBP-208	ENST00000477447		A6NJY4	79 aa		6.27	□□□□□ -1.41
TARDBP-208	ENST00000477447	TTLL8	A6PVC2	850 aa		6.27	□□□□□ -1.41
TARDBP-208	ENST00000477447	PRMT3	O60678	531 aa		6.27	□□□□□ -1.41
TARDBP-208	ENST00000477447	CENPC	Q03188	943 aa		6.27	□□□□□ -1.41
TARDBP-208	ENST00000477447	RNF217	Q8TC41	542 aa		6.27	□□□□□ -1.41
TARDBP-208	ENST00000477447	SLC4A9	Q96Q91	983 aa		6.27	□□□□□ -1.41
TARDBP-208	ENST00000477447	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	6.27	□□□□□ -1.41
TARDBP-208	ENST00000477447	FHDC1	Q9C0D6	1143 aa	Predicted RBP	6.27	□□□□□ -1.41
TARDBP-208	ENST00000477447	LCE2B	O14633	110 aa		6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	GTF2E1	P29083	439 aa	Predicted RBP	6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	GPC1	P35052	558 aa		6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	RNF144A	P50876	292 aa	Predicted RBP	6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	EPHA4	P54764	986 aa		6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	FAM69C	Q0P6D2	419 aa		6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	MTFR1	Q15390	333 aa		6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	TBCEL	Q5QJ74	424 aa		6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	TMEM214	Q6NUQ4	689 aa	Known RBP	6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	SLC9A9	Q8IVB4	645 aa		6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	NBPF15	Q8N660	670 aa		6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	USP3	Q9Y6I4	520 aa		6.26	□□□□□ -1.41
TARDBP-208	ENST00000477447	SOS2	Q07890	1332 aa	Predicted RBP	6.25	□□□□□ -1.41
TARDBP-208	ENST00000477447	FIGNL2	A6NMB9	653 aa		6.25	□□□□□ -1.41
TARDBP-208	ENST00000477447	PDE4C	Q08493	712 aa		6.25	□□□□□ -1.41
TARDBP-208	ENST00000477447	GNAS	Q5JWF2	1037 aa		6.25	□□□□□ -1.41
TARDBP-208	ENST00000477447	CLP1	Q92989	425 aa	Known RBP	6.25	□□□□□ -1.41
TARDBP-208	ENST00000477447	PRIMPOL	Q96LW4	560 aa		6.25	□□□□□ -1.41
TARDBP-208	ENST00000477447	SCHIP1	Q9P0W5	487 aa	Predicted RBP	6.25	□□□□□ -1.41
TARDBP-208	ENST00000477447	GMPR2	Q9P2T1	348 aa	Known RBP	6.25	□□□□□ -1.41
TARDBP-208	ENST00000477447	MAN1A2	O60476	641 aa		6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	ATP2B4	P23634	1241 aa		6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	FOXK2	Q01167	660 aa		6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	LYSMD3	Q7Z3D4	306 aa		6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	PRICKLE2	Q7Z3G6	844 aa		6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	GAS2L2	Q8NHY3	880 aa		6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	SCG3	Q8WXD2	468 aa	Known RBP	6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	GRIP2	Q9C0E4	1043 aa		6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	SENP2	Q9HC62	589 aa		6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	SLAIN2	Q9P270	581 aa		6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	DNMT3L	Q9UJW3	386 aa		6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	6.24	□□□□□ -1.41
TARDBP-208	ENST00000477447	SOBP	A7XYQ1	873 aa		6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	CDK2AP1	O14519	115 aa		6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	PPP1R12B	O60237	982 aa	Predicted RBP	6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	PDIA4	P13667	645 aa	Known RBP	6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	RHOQ	P17081	205 aa		6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	PLA2G4A	P47712	749 aa		6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	PPARGC1B	Q86YN6	1023 aa	Known RBP	6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	RHBDD1	Q8TEB9	315 aa		6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	CHMP7	Q8WUX9	453 aa	Predicted RBP	6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	KIFC2	Q96AC6	838 aa		6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	TRIM47	Q96LD4	638 aa		6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	CABP1	Q9NZU7	370 aa		6.23	□□□□□ -1.41
TARDBP-208	ENST00000477447	C21orf2	O43822	256 aa		6.22	□□□□□ -1.41
TARDBP-208	ENST00000477447	IGFBP4	P22692	258 aa		6.22	□□□□□ -1.41
TARDBP-208	ENST00000477447	WEE1	P30291	646 aa		6.22	□□□□□ -1.41
TARDBP-208	ENST00000477447	PHKA2	P46019	1235 aa		6.22	□□□□□ -1.41
TARDBP-208	ENST00000477447	PSMA6	P60900	246 aa	Known RBP	6.22	□□□□□ -1.41
TARDBP-208	ENST00000477447	POU4F2	Q12837	409 aa		6.22	□□□□□ -1.41
TARDBP-208	ENST00000477447	OCLN	Q16625	522 aa		6.22	□□□□□ -1.41
TARDBP-208	ENST00000477447	C4orf17	Q53FE4	359 aa		6.22	□□□□□ -1.41
TARDBP-208	ENST00000477447	NIFK	Q9BYG3	293 aa	Known RBP	6.22	□□□□□ -1.41
TARDBP-208	ENST00000477447	CXXC1	Q9P0U4	656 aa	Predicted RBP	6.22	□□□□□ -1.41
TARDBP-208	ENST00000477447	CHMP3	Q9Y3E7	222 aa		6.22	□□□□□ -1.41
TARDBP-208	ENST00000477447	ATAD2	Q6PL18	1390 aa		6.21	□□□□□ -1.41
TARDBP-208	ENST00000477447	SPATA31C2	B4DYI2	1134 aa		6.21	□□□□□ -1.42
TARDBP-208	ENST00000477447	FKBP5	Q13451	457 aa	Predicted RBP	6.21	□□□□□ -1.42
TARDBP-208	ENST00000477447	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	6.21	□□□□□ -1.42	6e-7	■■■■□ 26.5

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