RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 U2SURPO15042 1029 aaKnown RBP20.96■□□□□ 0.95
COMMD6-209ENST00000477377 CABP4P57796 275 aa20.96■□□□□ 0.95
COMMD6-209ENST00000477377 SMIM5Q71RC9 77 aa20.96■□□□□ 0.95
COMMD6-209ENST00000477377 SLC16A10Q8TF71 515 aa20.96■□□□□ 0.95
COMMD6-209ENST00000477377 ADAMTS7Q9UKP4 1686 aa20.96■□□□□ 0.95
COMMD6-209ENST00000477377 RSPH6AQ9H0K4 717 aa20.95■□□□□ 0.94
COMMD6-209ENST00000477377 RNMTO43148 476 aaKnown RBP20.94■□□□□ 0.94
COMMD6-209ENST00000477377 ATP6V1AP38606 617 aa20.94■□□□□ 0.94
COMMD6-209ENST00000477377 PHACTR3Q96KR7 559 aa20.93■□□□□ 0.94
COMMD6-209ENST00000477377 PPP1R1BQ9UD71 204 aaPredicted RBP20.93■□□□□ 0.94
COMMD6-209ENST00000477377 ZNF831Q5JPB2 1677 aa20.93■□□□□ 0.94
COMMD6-209ENST00000477377 DDX10Q13206 875 aaKnown RBP20.92■□□□□ 0.94
COMMD6-209ENST00000477377 CFAP53Q96M91 514 aa20.92■□□□□ 0.94
COMMD6-209ENST00000477377 SLC52A2Q9HAB3 445 aa20.92■□□□□ 0.94
COMMD6-209ENST00000477377 MRC1P22897 1456 aa20.92■□□□□ 0.94
COMMD6-209ENST00000477377 UBR3Q6ZT12 1888 aa20.92■□□□□ 0.94
COMMD6-209ENST00000477377 IL17REQ8NFR9 667 aa20.9■□□□□ 0.94
COMMD6-209ENST00000477377 HMGB2P26583 209 aaKnown RBP20.89■□□□□ 0.93
COMMD6-209ENST00000477377 PRKAR2BP31323 418 aa20.89■□□□□ 0.93
COMMD6-209ENST00000477377 ARXQ96QS3 562 aa20.89■□□□□ 0.93
COMMD6-209ENST00000477377 RBM42Q9BTD8 480 aaKnown RBP20.89■□□□□ 0.93
COMMD6-209ENST00000477377 FHDC1Q9C0D6 1143 aaPredicted RBP20.89■□□□□ 0.93
COMMD6-209ENST00000477377 VIRMAQ69YN4 1812 aaKnown RBP20.89■□□□□ 0.93
COMMD6-209ENST00000477377 AK7Q96M32 723 aa20.88■□□□□ 0.93
COMMD6-209ENST00000477377 SYT17Q9BSW7 474 aa20.88■□□□□ 0.93
COMMD6-209ENST00000477377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.87■□□□□ 0.93
COMMD6-209ENST00000477377 FLAD1Q8NFF5 587 aa20.87■□□□□ 0.93
COMMD6-209ENST00000477377 NUDCQ9Y266 331 aa20.87■□□□□ 0.93
COMMD6-209ENST00000477377 COL5A3P25940 1745 aaPredicted RBP20.87■□□□□ 0.93
COMMD6-209ENST00000477377 PTCD1O75127 700 aaKnown RBP20.86■□□□□ 0.93
COMMD6-209ENST00000477377 FCHSD2O94868 740 aa20.86■□□□□ 0.93
COMMD6-209ENST00000477377 U2AF1L5P0DN76 240 aaPredicted RBP20.86■□□□□ 0.93
COMMD6-209ENST00000477377 U2AF1Q01081 240 aaKnown RBP eCLIP20.86■□□□□ 0.93
COMMD6-209ENST00000477377 SLC39A6Q13433 755 aa20.86■□□□□ 0.93
COMMD6-209ENST00000477377 GAS2L2Q8NHY3 880 aa20.86■□□□□ 0.93
COMMD6-209ENST00000477377 MYH14Q7Z406 1995 aaKnown RBP20.85■□□□□ 0.93
COMMD6-209ENST00000477377 SSFA2P28290 1259 aa20.85■□□□□ 0.93
COMMD6-209ENST00000477377 RC3H1Q5TC82 1133 aaKnown RBP20.85■□□□□ 0.93
COMMD6-209ENST00000477377 MAP3K5Q99683 1374 aa20.85■□□□□ 0.93
COMMD6-209ENST00000477377 CNTNAP4Q9C0A0 1308 aa20.84■□□□□ 0.93
COMMD6-209ENST00000477377 GNAT3A8MTJ3 354 aa20.84■□□□□ 0.93
COMMD6-209ENST00000477377 GNPATO15228 680 aa20.84■□□□□ 0.93
COMMD6-209ENST00000477377 MSH5O43196 834 aa20.84■□□□□ 0.93
COMMD6-209ENST00000477377 PHF14O94880 888 aa20.84■□□□□ 0.93
COMMD6-209ENST00000477377 MSL1Q68DK7 614 aa20.84■□□□□ 0.93
COMMD6-209ENST00000477377 CICQ96RK0 1608 aaPredicted RBP20.84■□□□□ 0.93
COMMD6-209ENST00000477377 TJP1Q07157 1748 aa20.84■□□□□ 0.93
COMMD6-209ENST00000477377 CEMIPQ8WUJ3 1361 aa20.84■□□□□ 0.93
COMMD6-209ENST00000477377 KCPQ6ZWJ8 1503 aa20.83■□□□□ 0.93
COMMD6-209ENST00000477377 RALBP1Q15311 655 aa20.83■□□□□ 0.93
COMMD6-209ENST00000477377 PLEKHF1Q96S99 279 aa20.82■□□□□ 0.92
COMMD6-209ENST00000477377 UTRNP46939 3433 aa20.81■□□□□ 0.92
COMMD6-209ENST00000477377 POLD1P28340 1107 aa20.81■□□□□ 0.92
COMMD6-209ENST00000477377 SIPA1L3O60292 1781 aaPredicted RBP20.8■□□□□ 0.92
COMMD6-209ENST00000477377 RPS6KA4O75676 772 aa20.8■□□□□ 0.92
COMMD6-209ENST00000477377 INTS5Q6P9B9 1019 aaKnown RBP20.8■□□□□ 0.92
COMMD6-209ENST00000477377 ZEB1P37275 1124 aaPredicted RBP20.79■□□□□ 0.92
COMMD6-209ENST00000477377 CRKLP46109 303 aaKnown RBP20.79■□□□□ 0.92
COMMD6-209ENST00000477377 DNAJC10Q8IXB1 793 aa20.79■□□□□ 0.92
COMMD6-209ENST00000477377 ARHGEF1Q92888 912 aaKnown RBP20.79■□□□□ 0.92
COMMD6-209ENST00000477377 UBR2Q8IWV8 1755 aa20.78■□□□□ 0.92
COMMD6-209ENST00000477377 RTCBQ9Y3I0 505 aaKnown RBP20.78■□□□□ 0.92
COMMD6-209ENST00000477377 CYP19A1P11511 503 aaPredicted RBP20.77■□□□□ 0.92
COMMD6-209ENST00000477377 TRAPPC3LQ5T215 181 aa20.77■□□□□ 0.92
COMMD6-209ENST00000477377 KCNQ3O43525 872 aa20.76■□□□□ 0.91
COMMD6-209ENST00000477377 NLGN2Q8NFZ4 835 aa20.76■□□□□ 0.91
COMMD6-209ENST00000477377 ADRA2BP18089 450 aa20.75■□□□□ 0.91
COMMD6-209ENST00000477377 ZNF790Q6PG37 636 aa20.75■□□□□ 0.91
COMMD6-209ENST00000477377 MCM10Q7L590 875 aa20.75■□□□□ 0.91
COMMD6-209ENST00000477377 VSIG10Q8N0Z9 540 aa20.75■□□□□ 0.91
COMMD6-209ENST00000477377 DCTN1Q14203 1278 aa20.74■□□□□ 0.91
COMMD6-209ENST00000477377 ZNF496Q96IT1 587 aaPredicted RBP20.74■□□□□ 0.91
COMMD6-209ENST00000477377 MYBBP1AQ9BQG0 1328 aaKnown RBP20.74■□□□□ 0.91
COMMD6-209ENST00000477377 GYS1P13807 737 aa20.73■□□□□ 0.91
COMMD6-209ENST00000477377 TEFQ10587 303 aa20.73■□□□□ 0.91
COMMD6-209ENST00000477377 GOLGB1Q14789 3259 aaKnown RBP20.73■□□□□ 0.91
COMMD6-209ENST00000477377 HTATSF1O43719 755 aaKnown RBP20.72■□□□□ 0.91
COMMD6-209ENST00000477377 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
COMMD6-209ENST00000477377 C4AP0C0L4 1744 aa20.72■□□□□ 0.91
COMMD6-209ENST00000477377 CCDC87Q9NVE4 849 aa20.71■□□□□ 0.91
COMMD6-209ENST00000477377 SOS1Q07889 1333 aaPredicted RBP20.71■□□□□ 0.91
COMMD6-209ENST00000477377 HEG1Q9ULI3 1381 aa20.71■□□□□ 0.91
COMMD6-209ENST00000477377 KLHL34Q8N239 644 aa20.7■□□□□ 0.9
COMMD6-209ENST00000477377 SRP68Q9UHB9 627 aaKnown RBP20.7■□□□□ 0.9
COMMD6-209ENST00000477377 ZBTB1Q9Y2K1 713 aa20.7■□□□□ 0.9
COMMD6-209ENST00000477377 BTBD11A6QL63 1104 aa20.69■□□□□ 0.9
COMMD6-209ENST00000477377 RFC4P35249 363 aa20.69■□□□□ 0.9
COMMD6-209ENST00000477377 CD2APQ9Y5K6 639 aa20.69■□□□□ 0.9
COMMD6-209ENST00000477377 DLG5Q8TDM6 1919 aa20.68■□□□□ 0.9
COMMD6-209ENST00000477377 MMP10P09238 476 aa20.68■□□□□ 0.9
COMMD6-209ENST00000477377 TTC5Q8N0Z6 440 aa20.68■□□□□ 0.9
COMMD6-209ENST00000477377 NLGN1Q8N2Q7 840 aa20.68■□□□□ 0.9
COMMD6-209ENST00000477377 USP42Q9H9J4 1324 aaKnown RBP20.68■□□□□ 0.9
COMMD6-209ENST00000477377 NFE2L2Q16236 605 aa20.67■□□□□ 0.9
COMMD6-209ENST00000477377 RTF1Q92541 710 aaKnown RBP20.67■□□□□ 0.9
COMMD6-209ENST00000477377 PRAMEF22A3QJZ6 481 aa20.66■□□□□ 0.9
COMMD6-209ENST00000477377 FKBP8Q14318 412 aa20.66■□□□□ 0.9
COMMD6-209ENST00000477377 EIF5P55010 431 aaKnown RBP20.65■□□□□ 0.9
COMMD6-209ENST00000477377 FMNL2Q96PY5 1086 aa20.65■□□□□ 0.9
COMMD6-209ENST00000477377 BCL2L12Q9HB09 334 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms