RNA–Protein interactions for RNA: ENST00000477271.3

RN7SL294P-201, Transcript of RNA, 7SL, cytoplasmic 294, pseudogene, humanhuman

BASIC

Gene RN7SL294P, Length 295 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL294P-201ENST00000477271 KDM6AO15550 1401 aaPredicted RBP13.28□□□□□ -0.28
RN7SL294P-201ENST00000477271 ITPK1Q13572 414 aa13.27□□□□□ -0.29
RN7SL294P-201ENST00000477271 MTHFSDQ2M296 383 aaKnown RBP13.27□□□□□ -0.29
RN7SL294P-201ENST00000477271 LINC00116Q8NCU8 138 aa13.27□□□□□ -0.29
RN7SL294P-201ENST00000477271 SYT17Q9BSW7 474 aa13.27□□□□□ -0.29
RN7SL294P-201ENST00000477271 COL3A1P02461 1466 aaPredicted RBP13.26□□□□□ -0.29
RN7SL294P-201ENST00000477271 SSFA2P28290 1259 aa13.26□□□□□ -0.29
RN7SL294P-201ENST00000477271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.25□□□□□ -0.29
RN7SL294P-201ENST00000477271 GNPATO15228 680 aa13.25□□□□□ -0.29
RN7SL294P-201ENST00000477271 RNMTO43148 476 aaKnown RBP13.25□□□□□ -0.29
RN7SL294P-201ENST00000477271 GAS2L2Q8NHY3 880 aa13.25□□□□□ -0.29
RN7SL294P-201ENST00000477271 SLC52A2Q9HAB3 445 aa13.25□□□□□ -0.29
RN7SL294P-201ENST00000477271 LGR6Q9HBX8 967 aa13.25□□□□□ -0.29
RN7SL294P-201ENST00000477271 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
RN7SL294P-201ENST00000477271 PHF14O94880 888 aa13.24□□□□□ -0.29
RN7SL294P-201ENST00000477271 U2AF1L5P0DN76 240 aaPredicted RBP13.24□□□□□ -0.29
RN7SL294P-201ENST00000477271 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.29
RN7SL294P-201ENST00000477271 RC3H1Q5TC82 1133 aaKnown RBP13.24□□□□□ -0.29
RN7SL294P-201ENST00000477271 SLC4A9Q96Q91 983 aa13.24□□□□□ -0.29
RN7SL294P-201ENST00000477271 MAP3K5Q99683 1374 aa13.23□□□□□ -0.29
RN7SL294P-201ENST00000477271 ITGB4P16144 1822 aa13.23□□□□□ -0.29
RN7SL294P-201ENST00000477271 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
RN7SL294P-201ENST00000477271 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
RN7SL294P-201ENST00000477271 RTCBQ9Y3I0 505 aaKnown RBP13.23□□□□□ -0.29
RN7SL294P-201ENST00000477271 FCHSD2O94868 740 aa13.22□□□□□ -0.29
RN7SL294P-201ENST00000477271 PRKAR2BP31323 418 aa13.22□□□□□ -0.29
RN7SL294P-201ENST00000477271 MSL1Q68DK7 614 aa13.22□□□□□ -0.29
RN7SL294P-201ENST00000477271 RSPH6AQ9H0K4 717 aa13.22□□□□□ -0.29
RN7SL294P-201ENST00000477271 C4BP0C0L5 1744 aa13.22□□□□□ -0.29
RN7SL294P-201ENST00000477271 QSER1Q2KHR3 1735 aa13.22□□□□□ -0.29
RN7SL294P-201ENST00000477271 C5P01031 1676 aa13.21□□□□□ -0.29
RN7SL294P-201ENST00000477271 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
RN7SL294P-201ENST00000477271 ADRA2BP18089 450 aa13.21□□□□□ -0.29
RN7SL294P-201ENST00000477271 TEFQ10587 303 aa13.21□□□□□ -0.29
RN7SL294P-201ENST00000477271 TRAPPC3LQ5T215 181 aa13.21□□□□□ -0.29
RN7SL294P-201ENST00000477271 AMIGO3Q86WK7 504 aa13.21□□□□□ -0.29
RN7SL294P-201ENST00000477271 RPS6KA4O75676 772 aa13.2□□□□□ -0.3
RN7SL294P-201ENST00000477271 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
RN7SL294P-201ENST00000477271 SMIM5Q71RC9 77 aa13.2□□□□□ -0.3
RN7SL294P-201ENST00000477271 PHACTR3Q96KR7 559 aa13.2□□□□□ -0.3
RN7SL294P-201ENST00000477271 ZEB1P37275 1124 aaPredicted RBP13.19□□□□□ -0.3
RN7SL294P-201ENST00000477271 RALBP1Q15311 655 aa13.19□□□□□ -0.3
RN7SL294P-201ENST00000477271 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
RN7SL294P-201ENST00000477271 NEFMP07197 916 aa13.18□□□□□ -0.3
RN7SL294P-201ENST00000477271 RFC4P35249 363 aa13.18□□□□□ -0.3
RN7SL294P-201ENST00000477271 CRKLP46109 303 aaKnown RBP13.18□□□□□ -0.3
RN7SL294P-201ENST00000477271 SLC39A6Q13433 755 aa13.18□□□□□ -0.3
RN7SL294P-201ENST00000477271 IL17REQ8NFR9 667 aa13.18□□□□□ -0.3
RN7SL294P-201ENST00000477271 MRC1P22897 1456 aa13.17□□□□□ -0.3
RN7SL294P-201ENST00000477271 VSIG10Q8N0Z9 540 aa13.17□□□□□ -0.3
RN7SL294P-201ENST00000477271 NLGN1Q8N2Q7 840 aa13.17□□□□□ -0.3
RN7SL294P-201ENST00000477271 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
RN7SL294P-201ENST00000477271 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
RN7SL294P-201ENST00000477271 CD2APQ9Y5K6 639 aa13.17□□□□□ -0.3
RN7SL294P-201ENST00000477271 ZNF831Q5JPB2 1677 aa13.16□□□□□ -0.3
RN7SL294P-201ENST00000477271 GPR162Q16538 588 aa13.16□□□□□ -0.3
RN7SL294P-201ENST00000477271 DNAJC10Q8IXB1 793 aa13.16□□□□□ -0.3
RN7SL294P-201ENST00000477271 PNNQ9H307 717 aaKnown RBP13.16□□□□□ -0.3
RN7SL294P-201ENST00000477271 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
RN7SL294P-201ENST00000477271 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
RN7SL294P-201ENST00000477271 STARD3NLO95772 234 aa13.15□□□□□ -0.3
RN7SL294P-201ENST00000477271 YY1P25490 414 aa13.15□□□□□ -0.3
RN7SL294P-201ENST00000477271 ZNF790Q6PG37 636 aa13.15□□□□□ -0.3
RN7SL294P-201ENST00000477271 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
RN7SL294P-201ENST00000477271 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.3
RN7SL294P-201ENST00000477271 TUBGCP6Q96RT7 1819 aa13.15□□□□□ -0.3
RN7SL294P-201ENST00000477271 MMP10P09238 476 aa13.14□□□□□ -0.31
RN7SL294P-201ENST00000477271 CYP19A1P11511 503 aaPredicted RBP13.14□□□□□ -0.31
RN7SL294P-201ENST00000477271 INTS5Q6P9B9 1019 aaKnown RBP13.14□□□□□ -0.31
RN7SL294P-201ENST00000477271 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
RN7SL294P-201ENST00000477271 CEMIPQ8WUJ3 1361 aa13.14□□□□□ -0.31
RN7SL294P-201ENST00000477271 SCN11AQ9UI33 1791 aa13.13□□□□□ -0.31
RN7SL294P-201ENST00000477271 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
RN7SL294P-201ENST00000477271 GYS1P13807 737 aa13.13□□□□□ -0.31
RN7SL294P-201ENST00000477271 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
RN7SL294P-201ENST00000477271 ZNF496Q96IT1 587 aaPredicted RBP13.13□□□□□ -0.31
RN7SL294P-201ENST00000477271 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
RN7SL294P-201ENST00000477271 GOLGB1Q14789 3259 aaKnown RBP13.12□□□□□ -0.31
RN7SL294P-201ENST00000477271 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
RN7SL294P-201ENST00000477271 MCM10Q7L590 875 aa13.12□□□□□ -0.31
RN7SL294P-201ENST00000477271 FMNL2Q96PY5 1086 aa13.12□□□□□ -0.31
RN7SL294P-201ENST00000477271 UBR3Q6ZT12 1888 aa13.12□□□□□ -0.31
RN7SL294P-201ENST00000477271 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
RN7SL294P-201ENST00000477271 MAPK8IP3Q9UPT6 1336 aa13.12□□□□□ -0.31
RN7SL294P-201ENST00000477271 GRIN3BO60391 1043 aa13.11□□□□□ -0.31
RN7SL294P-201ENST00000477271 ZPR1O75312 459 aa13.11□□□□□ -0.31
RN7SL294P-201ENST00000477271 PARP3Q9Y6F1 533 aa13.11□□□□□ -0.31
RN7SL294P-201ENST00000477271 KCPQ6ZWJ8 1503 aa13.11□□□□□ -0.31
RN7SL294P-201ENST00000477271 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
RN7SL294P-201ENST00000477271 USP42Q9H9J4 1324 aaKnown RBP13.11□□□□□ -0.31
RN7SL294P-201ENST00000477271 UTRNP46939 3433 aa13.1□□□□□ -0.31
RN7SL294P-201ENST00000477271 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
RN7SL294P-201ENST00000477271 PLEKHF1Q96S99 279 aa13.1□□□□□ -0.31
RN7SL294P-201ENST00000477271 CANXP27824 592 aaKnown RBP13.09□□□□□ -0.31
RN7SL294P-201ENST00000477271 DCTN1Q14203 1278 aa13.09□□□□□ -0.31
RN7SL294P-201ENST00000477271 TAF7Q15545 349 aaPredicted RBP13.09□□□□□ -0.31
RN7SL294P-201ENST00000477271 NFE2L2Q16236 605 aa13.09□□□□□ -0.31
RN7SL294P-201ENST00000477271 NPM2Q86SE8 214 aaKnown RBP13.09□□□□□ -0.31
RN7SL294P-201ENST00000477271 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
RN7SL294P-201ENST00000477271 ZBTB1Q9Y2K1 713 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms