RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 PHAXQ9H814 394 aaKnown RBP11.06□□□□□ -0.64
CCDC66-216ENST00000476142 PLEKHO1Q53GL0 409 aaPredicted RBP11.06□□□□□ -0.64
CCDC66-216ENST00000476142 ANKRD24Q8TF21 1146 aa11.06□□□□□ -0.64
CCDC66-216ENST00000476142 LRRC37A3O60309 1634 aa11.06□□□□□ -0.64
CCDC66-216ENST00000476142 ADAMTSL3P82987 1691 aa11.06□□□□□ -0.64
CCDC66-216ENST00000476142 SETD1BQ9UPS6 1966 aaKnown RBP11.05□□□□□ -0.64
CCDC66-216ENST00000476142 KCNQ3O43525 872 aa11.05□□□□□ -0.64
CCDC66-216ENST00000476142 GNAI3P08754 354 aa11.05□□□□□ -0.64
CCDC66-216ENST00000476142 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
CCDC66-216ENST00000476142 BABAM1Q9NWV8 329 aa11.05□□□□□ -0.64
CCDC66-216ENST00000476142 USP54Q70EL1 1684 aa11.05□□□□□ -0.64
CCDC66-216ENST00000476142 BTBD11A6QL63 1104 aa11.05□□□□□ -0.64
CCDC66-216ENST00000476142 LRRFIP2Q9Y608 721 aaKnown RBP11.05□□□□□ -0.64
CCDC66-216ENST00000476142 HSP90AA1P07900 732 aaKnown RBP11.05□□□□□ -0.64
CCDC66-216ENST00000476142 SDSP20132 328 aa11.05□□□□□ -0.64
CCDC66-216ENST00000476142 CASC1Q6TDU7 716 aa11.05□□□□□ -0.64
CCDC66-216ENST00000476142 ARHGEF25Q86VW2 580 aa11.05□□□□□ -0.64
CCDC66-216ENST00000476142 RBM42Q9BTD8 480 aaKnown RBP11.05□□□□□ -0.64
CCDC66-216ENST00000476142 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
CCDC66-216ENST00000476142 PNMA6EA0A0J9YXQ4 647 aa11.04□□□□□ -0.64
CCDC66-216ENST00000476142 UBTFL1P0CB47 393 aaPredicted RBP11.04□□□□□ -0.64
CCDC66-216ENST00000476142 EIF4A1P60842 406 aaKnown RBP11.04□□□□□ -0.64
CCDC66-216ENST00000476142 ZC3H6P61129 1189 aaKnown RBP11.04□□□□□ -0.64
CCDC66-216ENST00000476142 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
CCDC66-216ENST00000476142 TSHZ3Q63HK5 1081 aa11.04□□□□□ -0.64
CCDC66-216ENST00000476142 CHMP5Q9NZZ3 219 aa11.04□□□□□ -0.64
CCDC66-216ENST00000476142 CHPF2Q9P2E5 772 aa11.04□□□□□ -0.64
CCDC66-216ENST00000476142 ANXA1P04083 346 aa11.04□□□□□ -0.64
CCDC66-216ENST00000476142 KIF2CQ99661 725 aa11.04□□□□□ -0.64
CCDC66-216ENST00000476142 SOS1Q07889 1333 aaPredicted RBP11.04□□□□□ -0.64
CCDC66-216ENST00000476142 CEMIPQ8WUJ3 1361 aa11.03□□□□□ -0.64
CCDC66-216ENST00000476142 DDX17Q92841 729 aaKnown RBP11.03□□□□□ -0.64
CCDC66-216ENST00000476142 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
CCDC66-216ENST00000476142 SNX21Q969T3 373 aa11.03□□□□□ -0.64
CCDC66-216ENST00000476142 LMTK3Q96Q04 1460 aa11.03□□□□□ -0.64
CCDC66-216ENST00000476142 AMOTQ4VCS5 1084 aa11.02□□□□□ -0.64
CCDC66-216ENST00000476142 LRRCC1Q9C099 1032 aa11.02□□□□□ -0.64
CCDC66-216ENST00000476142 C19orf44Q9H6X5 657 aa11.02□□□□□ -0.64
CCDC66-216ENST00000476142 FAM208AQ9UK61 1670 aaKnown RBP11.02□□□□□ -0.65
CCDC66-216ENST00000476142 CD2BP2O95400 341 aaKnown RBP11.02□□□□□ -0.65
CCDC66-216ENST00000476142 ATF3P18847 181 aa11.02□□□□□ -0.65
CCDC66-216ENST00000476142 SRCIN1Q9C0H9 1055 aa11.02□□□□□ -0.65
CCDC66-216ENST00000476142 USP44Q9H0E7 712 aa11.02□□□□□ -0.65
CCDC66-216ENST00000476142 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
CCDC66-216ENST00000476142 PDE1AP54750 535 aa11.01□□□□□ -0.65
CCDC66-216ENST00000476142 ATP8B2P98198 1209 aa11.01□□□□□ -0.65
CCDC66-216ENST00000476142 C1orf167Q5SNV9 1468 aa11.01□□□□□ -0.65
CCDC66-216ENST00000476142 PXDNQ92626 1479 aa11.01□□□□□ -0.65
CCDC66-216ENST00000476142 PI4KAP2A4QPH2 592 aa11□□□□□ -0.65
CCDC66-216ENST00000476142 EIF5BO60841 1220 aaKnown RBP11□□□□□ -0.65
CCDC66-216ENST00000476142 PI4KAP1Q8N8J0 262 aa11□□□□□ -0.65
CCDC66-216ENST00000476142 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
CCDC66-216ENST00000476142 RGPD2P0DJD1 1756 aa11□□□□□ -0.65
CCDC66-216ENST00000476142 K7ELQ4 463 aaPredicted RBP10.99□□□□□ -0.65
CCDC66-216ENST00000476142 DNAAF4Q8WXU2 420 aa10.99□□□□□ -0.65
CCDC66-216ENST00000476142 IL1RAPL2Q9NP60 686 aa10.99□□□□□ -0.65
CCDC66-216ENST00000476142 TRIM6-TRIM34B2RNG4 842 aa10.99□□□□□ -0.65
CCDC66-216ENST00000476142 MX1P20591 662 aa10.99□□□□□ -0.65
CCDC66-216ENST00000476142 MCM4P33991 863 aa10.99□□□□□ -0.65
CCDC66-216ENST00000476142 RILPL2Q969X0 211 aa10.99□□□□□ -0.65
CCDC66-216ENST00000476142 USP26Q9BXU7 913 aa10.99□□□□□ -0.65
CCDC66-216ENST00000476142 CSB-PGBD3P0DP91 1061 aa10.99□□□□□ -0.65
CCDC66-216ENST00000476142 PPP1R42Q7Z4L9 355 aa10.99□□□□□ -0.65
CCDC66-216ENST00000476142 CABLES1Q8TDN4 633 aa10.99□□□□□ -0.65
CCDC66-216ENST00000476142 TMEM94Q12767 1356 aa10.98□□□□□ -0.65
CCDC66-216ENST00000476142 SLIT3O75094 1523 aa10.98□□□□□ -0.65
CCDC66-216ENST00000476142 PRAMEF22A3QJZ6 481 aa10.98□□□□□ -0.65
CCDC66-216ENST00000476142 SURF6O75683 361 aaKnown RBP10.98□□□□□ -0.65
CCDC66-216ENST00000476142 HOXB7P09629 217 aa10.98□□□□□ -0.65
CCDC66-216ENST00000476142 NBPF7P0C2Y1 421 aaPredicted RBP10.98□□□□□ -0.65
CCDC66-216ENST00000476142 RAPGEF4Q8WZA2 1011 aa10.98□□□□□ -0.65
CCDC66-216ENST00000476142 CHMP4AQ9BY43 222 aa10.98□□□□□ -0.65
CCDC66-216ENST00000476142 IBTKQ9P2D0 1353 aaPredicted RBP10.98□□□□□ -0.65
CCDC66-216ENST00000476142 KDM4FA0A1W2PPD8 638 aa10.98□□□□□ -0.65
CCDC66-216ENST00000476142 ERC2O15083 957 aa10.98□□□□□ -0.65
CCDC66-216ENST00000476142 SRGAP3O43295 1099 aa10.98□□□□□ -0.65
CCDC66-216ENST00000476142 REC8O95072 547 aa10.98□□□□□ -0.65
CCDC66-216ENST00000476142 ARXQ96QS3 562 aa10.98□□□□□ -0.65
CCDC66-216ENST00000476142 GZF1Q9H116 711 aaPredicted RBP10.98□□□□□ -0.65
CCDC66-216ENST00000476142 PXDNLA1KZ92 1463 aa10.97□□□□□ -0.65
CCDC66-216ENST00000476142 ERBB3P21860 1342 aa10.97□□□□□ -0.65
CCDC66-216ENST00000476142 RABEP1Q15276 862 aa10.97□□□□□ -0.65
CCDC66-216ENST00000476142 PROSER3Q2NL68 480 aa10.97□□□□□ -0.65
CCDC66-216ENST00000476142 NUTM1Q86Y26 1132 aa10.97□□□□□ -0.65
CCDC66-216ENST00000476142 OSBPL3Q9H4L5 887 aa10.97□□□□□ -0.65
CCDC66-216ENST00000476142 DBF4Q9UBU7 674 aaPredicted RBP10.97□□□□□ -0.65
CCDC66-216ENST00000476142 BEND3Q5T5X7 828 aa10.97□□□□□ -0.65
CCDC66-216ENST00000476142 MED1Q15648 1581 aaPredicted RBP10.96□□□□□ -0.65
CCDC66-216ENST00000476142 NCOA3Q9Y6Q9 1424 aa10.96□□□□□ -0.65
CCDC66-216ENST00000476142 AIMP1Q12904 312 aaKnown RBP10.96□□□□□ -0.65
CCDC66-216ENST00000476142 CHRNA2Q15822 529 aa10.96□□□□□ -0.65
CCDC66-216ENST00000476142 MAP3K2Q9Y2U5 619 aa10.96□□□□□ -0.65
CCDC66-216ENST00000476142 GIGYF1O75420 1035 aaPredicted RBP10.96□□□□□ -0.66
CCDC66-216ENST00000476142 OS9Q13438 667 aaPredicted RBP10.96□□□□□ -0.66
CCDC66-216ENST00000476142 BRPF3Q9ULD4 1205 aa10.96□□□□□ -0.66
CCDC66-216ENST00000476142 NCAPD2Q15021 1401 aa10.96□□□□□ -0.66
CCDC66-216ENST00000476142 DDIT3P35638 169 aa10.95□□□□□ -0.66
CCDC66-216ENST00000476142 HSPA2P54652 639 aa10.95□□□□□ -0.66
CCDC66-216ENST00000476142 SLC39A6Q13433 755 aa10.95□□□□□ -0.66
CCDC66-216ENST00000476142 SSH3Q8TE77 659 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms