RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 ADAMTS7Q9UKP4 1686 aa15.1■□□□□ 0.01
BEST3-204ENST00000476098 POTEAQ6S8J7 498 aa15.09■□□□□ 0.01
BEST3-204ENST00000476098 LRRC37A3O60309 1634 aa15.09■□□□□ 0.01
BEST3-204ENST00000476098 WNK3Q9BYP7 1800 aa15.09■□□□□ 0.01
BEST3-204ENST00000476098 THSD7AQ9UPZ6 1657 aa15.09■□□□□ 0.01
BEST3-204ENST00000476098 RXRBP28702 533 aa15.09■□□□□ 0.01
BEST3-204ENST00000476098 KCNQ3O43525 872 aa15.08■□□□□ 0
BEST3-204ENST00000476098 C8orf58Q8NAV2 365 aa15.08■□□□□ 0
BEST3-204ENST00000476098 MRC1P22897 1456 aa15.07■□□□□ 0
BEST3-204ENST00000476098 KRT24Q2M2I5 525 aa15.07■□□□□ 0
BEST3-204ENST00000476098 TSPYL6Q8N831 410 aa15.07■□□□□ 0
BEST3-204ENST00000476098 CT47B1P0C2W7 299 aaPredicted RBP15.06■□□□□ 0
BEST3-204ENST00000476098 PRIM1P49642 420 aaKnown RBP15.06■□□□□ 0
BEST3-204ENST00000476098 EIF4A1P60842 406 aaKnown RBP15.06■□□□□ 0
BEST3-204ENST00000476098 SLC39A6Q13433 755 aa15.06■□□□□ 0
BEST3-204ENST00000476098 PIGBQ92521 554 aa15.06■□□□□ 0
BEST3-204ENST00000476098 TMOD3Q9NYL9 352 aa15.06■□□□□ 0
BEST3-204ENST00000476098 RCAN3Q9UKA8 241 aa15.06■□□□□ 0
BEST3-204ENST00000476098 ZNF790Q6PG37 636 aa15.06■□□□□ 0
BEST3-204ENST00000476098 ELL2O00472 640 aaPredicted RBP15.05■□□□□ -0
BEST3-204ENST00000476098 VAMP4O75379 141 aa15.05■□□□□ -0
BEST3-204ENST00000476098 FAM182BQ5T319 152 aa15.05■□□□□ -0
BEST3-204ENST00000476098 SCN11AQ9UI33 1791 aa15.04■□□□□ -0
BEST3-204ENST00000476098 TWISTNBQ3B726 338 aaPredicted RBP15.04■□□□□ -0
BEST3-204ENST00000476098 ACSBG1Q96GR2 724 aa15.04■□□□□ -0
BEST3-204ENST00000476098 KRT27Q7Z3Y8 459 aa15.03■□□□□ -0
BEST3-204ENST00000476098 SYTL4Q96C24 671 aaPredicted RBP15.03■□□□□ -0
BEST3-204ENST00000476098 BCL9O00512 1426 aa15.03■□□□□ -0
BEST3-204ENST00000476098 KCNQ2O43526 872 aa15.03■□□□□ -0
BEST3-204ENST00000476098 RARSP54136 660 aaKnown RBP15.03■□□□□ -0
BEST3-204ENST00000476098 HEG1Q9ULI3 1381 aa15.02■□□□□ -0
BEST3-204ENST00000476098 TTC5Q8N0Z6 440 aa15.02□□□□□ -0.01
BEST3-204ENST00000476098 ASAP1Q9ULH1 1129 aa15.02□□□□□ -0.01
BEST3-204ENST00000476098 SUPT16HQ9Y5B9 1047 aaKnown RBP15.02□□□□□ -0.01
BEST3-204ENST00000476098 ZNF428Q96B54 188 aa15.01□□□□□ -0.01
BEST3-204ENST00000476098 ZNF496Q96IT1 587 aaPredicted RBP15.01□□□□□ -0.01
BEST3-204ENST00000476098 ATG3Q9NT62 314 aa15.01□□□□□ -0.01
BEST3-204ENST00000476098 TOGARAM1Q9Y4F4 1720 aa15.01□□□□□ -0.01
BEST3-204ENST00000476098 GIGYF1O75420 1035 aaPredicted RBP15□□□□□ -0.01
BEST3-204ENST00000476098 SOS1Q07889 1333 aaPredicted RBP15□□□□□ -0.01
BEST3-204ENST00000476098 SIPA1L3O60292 1781 aaPredicted RBP15□□□□□ -0.01
BEST3-204ENST00000476098 BCAR3O75815 825 aa15□□□□□ -0.01
BEST3-204ENST00000476098 SSH1Q8WYL5 1049 aa15□□□□□ -0.01
BEST3-204ENST00000476098 FMNL2Q96PY5 1086 aa15□□□□□ -0.01
BEST3-204ENST00000476098 RGS12O14924 1447 aa14.99□□□□□ -0.01
BEST3-204ENST00000476098 HOXB7P09629 217 aa14.99□□□□□ -0.01
BEST3-204ENST00000476098 FAM196AQ6ZSG2 479 aa14.99□□□□□ -0.01
BEST3-204ENST00000476098 PTF1AQ7RTS3 328 aa14.99□□□□□ -0.01
BEST3-204ENST00000476098 RNF123Q5XPI4 1314 aa14.99□□□□□ -0.01
BEST3-204ENST00000476098 EP400Q96L91 3159 aa14.98□□□□□ -0.01
BEST3-204ENST00000476098 PRAMEF22A3QJZ6 481 aa14.98□□□□□ -0.01
BEST3-204ENST00000476098 PTCD1O75127 700 aaKnown RBP14.98□□□□□ -0.01
BEST3-204ENST00000476098 ALDH1L2Q3SY69 923 aa14.98□□□□□ -0.01
BEST3-204ENST00000476098 BCL2L13Q9BXK5 485 aa14.98□□□□□ -0.01
BEST3-204ENST00000476098 SNRPA1P09661 255 aaKnown RBP14.97□□□□□ -0.01
BEST3-204ENST00000476098 KDM3BQ7LBC6 1761 aa14.97□□□□□ -0.01
BEST3-204ENST00000476098 TCERG1O14776 1098 aaKnown RBP14.97□□□□□ -0.01
BEST3-204ENST00000476098 VIRMAQ69YN4 1812 aaKnown RBP14.96□□□□□ -0.01
BEST3-204ENST00000476098 SMC4Q9NTJ3 1288 aa14.96□□□□□ -0.01
BEST3-204ENST00000476098 EIF2S2P20042 333 aaKnown RBP14.95□□□□□ -0.02
BEST3-204ENST00000476098 BRPF1P55201 1214 aaPredicted RBP14.95□□□□□ -0.02
BEST3-204ENST00000476098 HDGFL1Q5TGJ6 251 aa14.95□□□□□ -0.02
BEST3-204ENST00000476098 CCDC30Q5VVM6 783 aa14.95□□□□□ -0.02
BEST3-204ENST00000476098 MRPL50Q8N5N7 158 aaKnown RBP14.95□□□□□ -0.02
BEST3-204ENST00000476098 SLC4A9Q96Q91 983 aa14.95□□□□□ -0.02
BEST3-204ENST00000476098 BCL11BQ9C0K0 894 aaPredicted RBP14.95□□□□□ -0.02
BEST3-204ENST00000476098 USP16Q9Y5T5 823 aa14.95□□□□□ -0.02
BEST3-204ENST00000476098 KCPQ6ZWJ8 1503 aa14.95□□□□□ -0.02
BEST3-204ENST00000476098 DOT1LQ8TEK3 1739 aa14.94□□□□□ -0.02
BEST3-204ENST00000476098 RRP1P56182 461 aaKnown RBP14.94□□□□□ -0.02
BEST3-204ENST00000476098 VSIG10Q8N0Z9 540 aa14.94□□□□□ -0.02
BEST3-204ENST00000476098 NECTIN2Q92692 538 aa14.94□□□□□ -0.02
BEST3-204ENST00000476098 SMARCC1Q92922 1105 aaPredicted RBP14.94□□□□□ -0.02
BEST3-204ENST00000476098 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
BEST3-204ENST00000476098 PLIN1O60240 522 aa14.93□□□□□ -0.02
BEST3-204ENST00000476098 CHMP4AQ9BY43 222 aa14.93□□□□□ -0.02
BEST3-204ENST00000476098 ITGB4P16144 1822 aa14.93□□□□□ -0.02
BEST3-204ENST00000476098 SLC4A2P04920 1241 aa14.93□□□□□ -0.02
BEST3-204ENST00000476098 PALLDQ8WX93 1383 aa14.92□□□□□ -0.02
BEST3-204ENST00000476098 TRIM37O94972 964 aa14.92□□□□□ -0.02
BEST3-204ENST00000476098 NOB1Q9ULX3 412 aaKnown RBP14.92□□□□□ -0.02
BEST3-204ENST00000476098 PAPPAQ13219 1627 aa14.92□□□□□ -0.02
BEST3-204ENST00000476098 LOC102724428A0A0B4J2F2 783 aa14.91□□□□□ -0.02
BEST3-204ENST00000476098 SIK1P57059 783 aa14.91□□□□□ -0.02
BEST3-204ENST00000476098 FRAT1Q92837 279 aaPredicted RBP14.91□□□□□ -0.02
BEST3-204ENST00000476098 STK31Q9BXU1 1019 aa14.91□□□□□ -0.02
BEST3-204ENST00000476098 TEX13AQ9BXU3 409 aaPredicted RBP14.91□□□□□ -0.02
BEST3-204ENST00000476098 CHPF2Q9P2E5 772 aa14.91□□□□□ -0.02
BEST3-204ENST00000476098 BRWD3Q6RI45 1802 aa14.91□□□□□ -0.02
BEST3-204ENST00000476098 KAT6BQ8WYB5 2073 aa14.91□□□□□ -0.02
BEST3-204ENST00000476098 PDIA6Q15084 440 aa14.9□□□□□ -0.02
BEST3-204ENST00000476098 DNAJC10Q8IXB1 793 aa14.9□□□□□ -0.02
BEST3-204ENST00000476098 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.9□□□□□ -0.02
BEST3-204ENST00000476098 KIF16BQ96L93 1317 aa14.9□□□□□ -0.02
BEST3-204ENST00000476098 G2E3Q7L622 706 aa14.9□□□□□ -0.02
BEST3-204ENST00000476098 DBF4Q9UBU7 674 aaPredicted RBP14.9□□□□□ -0.02
BEST3-204ENST00000476098 ATP6V1AP38606 617 aa14.89□□□□□ -0.03
BEST3-204ENST00000476098 PROSER3Q2NL68 480 aa14.89□□□□□ -0.03
BEST3-204ENST00000476098 DDX21Q9NR30 783 aaKnown RBP eCLIP14.89□□□□□ -0.03
BEST3-204ENST00000476098 UBR2Q8IWV8 1755 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms