RNA–Protein interactions for RNA: ENST00000476015.1

LAMP3-204, Transcript of lysosomal associated membrane protein 3, humanhuman

TSL 4

Gene LAMP3, Length 835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-204ENST00000476015 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
LAMP3-204ENST00000476015 SPATA31A5Q5VU36 1347 aa23.14■■□□□ 1.3
LAMP3-204ENST00000476015 SPATA31A7Q8IWB4 1347 aa23.14■■□□□ 1.3
LAMP3-204ENST00000476015 PARP4Q9UKK3 1724 aaKnown RBP23.14■■□□□ 1.3
LAMP3-204ENST00000476015 DDX54Q8TDD1 881 aaKnown RBP23.14■■□□□ 1.29
LAMP3-204ENST00000476015 SSH1Q8WYL5 1049 aa23.14■■□□□ 1.29
LAMP3-204ENST00000476015 SMC4Q9NTJ3 1288 aa23.14■■□□□ 1.29
LAMP3-204ENST00000476015 CCDC9Q9Y3X0 531 aaKnown RBP23.14■■□□□ 1.29
LAMP3-204ENST00000476015 CANXP27824 592 aaKnown RBP23.13■■□□□ 1.29
LAMP3-204ENST00000476015 BRPF1P55201 1214 aaPredicted RBP23.13■■□□□ 1.29
LAMP3-204ENST00000476015 CHMP4AQ9BY43 222 aa23.13■■□□□ 1.29
LAMP3-204ENST00000476015 SLC52A2Q9HAB3 445 aa23.13■■□□□ 1.29
LAMP3-204ENST00000476015 PLCH1Q4KWH8 1693 aa23.13■■□□□ 1.29
LAMP3-204ENST00000476015 IPO8O15397 1037 aaKnown RBP23.12■■□□□ 1.29
LAMP3-204ENST00000476015 MS4A1P11836 297 aa23.12■■□□□ 1.29
LAMP3-204ENST00000476015 PDE3AQ14432 1141 aa23.12■■□□□ 1.29
LAMP3-204ENST00000476015 VPS72Q15906 364 aa23.12■■□□□ 1.29
LAMP3-204ENST00000476015 PKD1L3Q7Z443 1732 aa23.12■■□□□ 1.29
LAMP3-204ENST00000476015 NWD2Q9ULI1 1742 aa23.12■■□□□ 1.29
LAMP3-204ENST00000476015 LRRC37A3O60309 1634 aa23.11■■□□□ 1.29
LAMP3-204ENST00000476015 ERVV-2B6SEH9 535 aa23.11■■□□□ 1.29
LAMP3-204ENST00000476015 BARGINQ6ZT62 677 aa23.11■■□□□ 1.29
LAMP3-204ENST00000476015 FRAT1Q92837 279 aaPredicted RBP23.11■■□□□ 1.29
LAMP3-204ENST00000476015 CABP4P57796 275 aa23.1■■□□□ 1.29
LAMP3-204ENST00000476015 NFATC2IPQ8NCF5 419 aa23.1■■□□□ 1.29
LAMP3-204ENST00000476015 BCL2L13Q9BXK5 485 aa23.1■■□□□ 1.29
LAMP3-204ENST00000476015 ZKSCAN2Q63HK3 967 aa23.09■■□□□ 1.29
LAMP3-204ENST00000476015 PPP4R2Q9NY27 417 aa23.09■■□□□ 1.29
LAMP3-204ENST00000476015 DISP2A7MBM2 1401 aa23.08■■□□□ 1.29
LAMP3-204ENST00000476015 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.29
LAMP3-204ENST00000476015 KRT24Q2M2I5 525 aa23.08■■□□□ 1.29
LAMP3-204ENST00000476015 MRPL50Q8N5N7 158 aaKnown RBP23.08■■□□□ 1.29
LAMP3-204ENST00000476015 NRAPQ86VF7 1730 aa23.08■■□□□ 1.28
LAMP3-204ENST00000476015 BCL9LQ86UU0 1499 aa23.07■■□□□ 1.28
LAMP3-204ENST00000476015 KDM6AO15550 1401 aaPredicted RBP23.07■■□□□ 1.28
LAMP3-204ENST00000476015 KIF16BQ96L93 1317 aa23.07■■□□□ 1.28
LAMP3-204ENST00000476015 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
LAMP3-204ENST00000476015 ARHGAP45Q92619 1136 aa23.06■■□□□ 1.28
LAMP3-204ENST00000476015 NOB1Q9ULX3 412 aaKnown RBP23.06■■□□□ 1.28
LAMP3-204ENST00000476015 HOXB7P09629 217 aa23.05■■□□□ 1.28
LAMP3-204ENST00000476015 DDB1Q16531 1140 aa23.05■■□□□ 1.28
LAMP3-204ENST00000476015 CCDC30Q5VVM6 783 aa23.05■■□□□ 1.28
LAMP3-204ENST00000476015 C20orf194Q5TEA3 1177 aa23.04■■□□□ 1.28
LAMP3-204ENST00000476015 EXOC6Q8TAG9 804 aa23.04■■□□□ 1.28
LAMP3-204ENST00000476015 SCN11AQ9UI33 1791 aa23.04■■□□□ 1.28
LAMP3-204ENST00000476015 KCNQ3O43525 872 aa23.03■■□□□ 1.28
LAMP3-204ENST00000476015 ZNF790Q6PG37 636 aa23.03■■□□□ 1.28
LAMP3-204ENST00000476015 GJD4Q96KN9 370 aaPredicted RBP23.03■■□□□ 1.28
LAMP3-204ENST00000476015 CRBNQ96SW2 442 aa23.03■■□□□ 1.28
LAMP3-204ENST00000476015 ATF7IPQ6VMQ6 1270 aa23.02■■□□□ 1.28
LAMP3-204ENST00000476015 STK31Q9BXU1 1019 aa23.02■■□□□ 1.28
LAMP3-204ENST00000476015 TCERG1O14776 1098 aaKnown RBP23.01■■□□□ 1.27
LAMP3-204ENST00000476015 DZIP1LQ8IYY4 767 aaKnown RBP23.01■■□□□ 1.27
LAMP3-204ENST00000476015 TTC5Q8N0Z6 440 aa23.01■■□□□ 1.27
LAMP3-204ENST00000476015 SLC4A2P04920 1241 aa23■■□□□ 1.27
LAMP3-204ENST00000476015 VIRMAQ69YN4 1812 aaKnown RBP23■■□□□ 1.27
LAMP3-204ENST00000476015 SLC39A6Q13433 755 aa22.99■■□□□ 1.27
LAMP3-204ENST00000476015 DEFB132Q7Z7B7 95 aa22.99■■□□□ 1.27
LAMP3-204ENST00000476015 GIGYF1O75420 1035 aaPredicted RBP22.98■■□□□ 1.27
LAMP3-204ENST00000476015 FAM98CQ17RN3 349 aaKnown RBP22.98■■□□□ 1.27
LAMP3-204ENST00000476015 FTSJ3Q8IY81 847 aaKnown RBP22.98■■□□□ 1.27
LAMP3-204ENST00000476015 PANK1Q8TE04 598 aa22.98■■□□□ 1.27
LAMP3-204ENST00000476015 API5Q9BZZ5 524 aaKnown RBP22.98■■□□□ 1.27
LAMP3-204ENST00000476015 HEG1Q9ULI3 1381 aa22.98■■□□□ 1.27
LAMP3-204ENST00000476015 MRC1P22897 1456 aa22.98■■□□□ 1.27
LAMP3-204ENST00000476015 KDM3BQ7LBC6 1761 aa22.97■■□□□ 1.27
LAMP3-204ENST00000476015 TRIM27P14373 513 aa22.97■■□□□ 1.27
LAMP3-204ENST00000476015 AAMPQ13685 434 aa22.97■■□□□ 1.27
LAMP3-204ENST00000476015 HDGFL1Q5TGJ6 251 aa22.97■■□□□ 1.27
LAMP3-204ENST00000476015 FMNL2Q96PY5 1086 aa22.97■■□□□ 1.27
LAMP3-204ENST00000476015 TMOD3Q9NYL9 352 aa22.97■■□□□ 1.27
LAMP3-204ENST00000476015 SIPA1L3O60292 1781 aaPredicted RBP22.96■■□□□ 1.27
LAMP3-204ENST00000476015 CLUAP1Q96AJ1 413 aa22.96■■□□□ 1.27
LAMP3-204ENST00000476015 TNS2Q63HR2 1409 aa22.96■■□□□ 1.27
LAMP3-204ENST00000476015 PTPRCP08575 1304 aa22.95■■□□□ 1.26
LAMP3-204ENST00000476015 EIF2S2P20042 333 aaKnown RBP22.95■■□□□ 1.26
LAMP3-204ENST00000476015 SHANK3Q9BYB0 1731 aa22.94■■□□□ 1.26
LAMP3-204ENST00000476015 SNRPA1P09661 255 aaKnown RBP22.94■■□□□ 1.26
LAMP3-204ENST00000476015 COG6Q9Y2V7 657 aa22.94■■□□□ 1.26
LAMP3-204ENST00000476015 MARCH10Q8NA82 808 aaPredicted RBP22.93■■□□□ 1.26
LAMP3-204ENST00000476015 NECTIN2Q92692 538 aa22.93■■□□□ 1.26
LAMP3-204ENST00000476015 ZNF496Q96IT1 587 aaPredicted RBP22.93■■□□□ 1.26
LAMP3-204ENST00000476015 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.93■■□□□ 1.26
LAMP3-204ENST00000476015 RLBP1P12271 317 aa22.92■■□□□ 1.26
LAMP3-204ENST00000476015 CCDC136Q96JN2 1154 aa22.92■■□□□ 1.26
LAMP3-204ENST00000476015 TNNQ9UQP3 1299 aa22.92■■□□□ 1.26
LAMP3-204ENST00000476015 WNK3Q9BYP7 1800 aa22.92■■□□□ 1.26
LAMP3-204ENST00000476015 LRP5O75197 1615 aa22.91■■□□□ 1.26
LAMP3-204ENST00000476015 ONECUT3O60422 494 aaPredicted RBP22.91■■□□□ 1.26
LAMP3-204ENST00000476015 MVPQ14764 893 aaKnown RBP22.91■■□□□ 1.26
LAMP3-204ENST00000476015 PIGBQ92521 554 aa22.91■■□□□ 1.26
LAMP3-204ENST00000476015 CHMP4BQ9H444 224 aaKnown RBP22.91■■□□□ 1.26
LAMP3-204ENST00000476015 DBF4Q9UBU7 674 aaPredicted RBP22.91■■□□□ 1.26
LAMP3-204ENST00000476015 GLI3P10071 1580 aa22.91■■□□□ 1.26
LAMP3-204ENST00000476015 A0A0G2JS52 829 aa22.9■■□□□ 1.26
LAMP3-204ENST00000476015 MYT1Q01538 1121 aa22.9■■□□□ 1.26
LAMP3-204ENST00000476015 PRIM1P49642 420 aaKnown RBP22.89■■□□□ 1.25
LAMP3-204ENST00000476015 DDX19BQ9UMR2 479 aa22.89■■□□□ 1.25
LAMP3-204ENST00000476015 SF3B2Q13435 895 aaKnown RBP22.88■■□□□ 1.25
LAMP3-204ENST00000476015 G2E3Q7L622 706 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms