RNA–Protein interactions for RNA: ENST00000475916.1

SLF1-204, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-204ENST00000475916 TMEM229AB2RXF0 380 aa9.66□□□□□ -0.86
SLF1-204ENST00000475916 ITGBL1O95965 494 aaPredicted RBP9.66□□□□□ -0.86
SLF1-204ENST00000475916 ZNF16P17020 682 aaPredicted RBP9.66□□□□□ -0.86
SLF1-204ENST00000475916 NR5A1Q13285 461 aa9.66□□□□□ -0.86
SLF1-204ENST00000475916 TNS4Q8IZW8 715 aa9.66□□□□□ -0.86
SLF1-204ENST00000475916 MPNDQ8N594 471 aa9.66□□□□□ -0.86
SLF1-204ENST00000475916 HELQQ8TDG4 1101 aa9.66□□□□□ -0.86
SLF1-204ENST00000475916 OSBPL3Q9H4L5 887 aa9.66□□□□□ -0.86
SLF1-204ENST00000475916 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.66□□□□□ -0.86
SLF1-204ENST00000475916 PPP1R12BO60237 982 aaPredicted RBP9.65□□□□□ -0.86
SLF1-204ENST00000475916 AAMPQ13685 434 aa9.65□□□□□ -0.86
SLF1-204ENST00000475916 ASB16Q96NS5 453 aa9.65□□□□□ -0.86
SLF1-204ENST00000475916 TMPRSS4Q9NRS4 437 aa9.65□□□□□ -0.86
SLF1-204ENST00000475916 UNCXA6NJT0 531 aa9.64□□□□□ -0.87
SLF1-204ENST00000475916 NDUFB5O43674 189 aa9.64□□□□□ -0.87
SLF1-204ENST00000475916 ALKBH2Q6NS38 261 aa9.64□□□□□ -0.87
SLF1-204ENST00000475916 ZNF784Q8NCA9 323 aaPredicted RBP9.64□□□□□ -0.87
SLF1-204ENST00000475916 ADH1CP00326 375 aa9.63□□□□□ -0.87
SLF1-204ENST00000475916 ITGAEP38570 1179 aa9.63□□□□□ -0.87
SLF1-204ENST00000475916 SCNN1DP51172 638 aa9.63□□□□□ -0.87
SLF1-204ENST00000475916 PPP1R18Q6NYC8 613 aa9.63□□□□□ -0.87
SLF1-204ENST00000475916 NPAS4Q8IUM7 802 aa9.63□□□□□ -0.87
SLF1-204ENST00000475916 TMC1Q8TDI8 760 aa9.63□□□□□ -0.87
SLF1-204ENST00000475916 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
SLF1-204ENST00000475916 FGD1P98174 961 aa9.62□□□□□ -0.87
SLF1-204ENST00000475916 MTMR3Q13615 1198 aa9.62□□□□□ -0.87
SLF1-204ENST00000475916 COL19A1Q14993 1142 aa9.62□□□□□ -0.87
SLF1-204ENST00000475916 PLA2G2CQ5R387 149 aa9.62□□□□□ -0.87
SLF1-204ENST00000475916 PPP1R26Q5T8A7 1209 aaPredicted RBP9.62□□□□□ -0.87
SLF1-204ENST00000475916 C16orf46Q6P387 395 aa9.62□□□□□ -0.87
SLF1-204ENST00000475916 SLC4A9Q96Q91 983 aa9.62□□□□□ -0.87
SLF1-204ENST00000475916 TSPAN10Q9H1Z9 355 aaPredicted RBP9.62□□□□□ -0.87
SLF1-204ENST00000475916 BRPF3Q9ULD4 1205 aa9.62□□□□□ -0.87
SLF1-204ENST00000475916 GRM5P41594 1212 aa9.61□□□□□ -0.87
SLF1-204ENST00000475916 EAPPQ56P03 285 aaPredicted RBP9.61□□□□□ -0.87
SLF1-204ENST00000475916 ETNK1Q9HBU6 452 aa9.61□□□□□ -0.87
SLF1-204ENST00000475916 A6NJY4 79 aa9.6□□□□□ -0.87
SLF1-204ENST00000475916 ARHGAP4P98171 946 aa9.6□□□□□ -0.87
SLF1-204ENST00000475916 RGL4Q8IZJ4 473 aa9.6□□□□□ -0.87
SLF1-204ENST00000475916 STAG2Q8N3U4 1231 aa9.6□□□□□ -0.87
SLF1-204ENST00000475916 NBPF15Q8N660 670 aa9.6□□□□□ -0.87
SLF1-204ENST00000475916 PURBQ96QR8 312 aaKnown RBP9.6□□□□□ -0.87
SLF1-204ENST00000475916 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
SLF1-204ENST00000475916 GTF2E1P29083 439 aaPredicted RBP9.59□□□□□ -0.87
SLF1-204ENST00000475916 SMTNP53814 917 aa9.59□□□□□ -0.87
SLF1-204ENST00000475916 PSMA6P60900 246 aaKnown RBP9.59□□□□□ -0.87
SLF1-204ENST00000475916 CAPN12Q6ZSI9 719 aa9.59□□□□□ -0.87
SLF1-204ENST00000475916 CITED4Q96RK1 184 aa9.59□□□□□ -0.87
SLF1-204ENST00000475916 SCHIP1Q9P0W5 487 aaPredicted RBP9.59□□□□□ -0.87
SLF1-204ENST00000475916 NPR3P17342 541 aa9.58□□□□□ -0.88
SLF1-204ENST00000475916 SLC9A9Q8IVB4 645 aa9.58□□□□□ -0.88
SLF1-204ENST00000475916 WNT7AO00755 349 aa9.57□□□□□ -0.88
SLF1-204ENST00000475916 TLR1Q15399 786 aa9.57□□□□□ -0.88
SLF1-204ENST00000475916 NOM1Q5C9Z4 860 aaKnown RBP9.57□□□□□ -0.88
SLF1-204ENST00000475916 ABTB2Q8N961 1025 aa9.57□□□□□ -0.88
SLF1-204ENST00000475916 RBCK1Q9BYM8 510 aa9.57□□□□□ -0.88
SLF1-204ENST00000475916 ARHGEF10LQ9HCE6 1279 aa9.57□□□□□ -0.88
SLF1-204ENST00000475916 STIM2Q9P246 746 aa9.57□□□□□ -0.88
SLF1-204ENST00000475916 WASF2Q9Y6W5 498 aa9.57□□□□□ -0.88
SLF1-204ENST00000475916 CDK2AP1O14519 115 aa9.56□□□□□ -0.88
SLF1-204ENST00000475916 LILRA1O75019 489 aa9.56□□□□□ -0.88
SLF1-204ENST00000475916 STAU1O95793 577 aaKnown RBP9.56□□□□□ -0.88
SLF1-204ENST00000475916 MPSTP25325 297 aa9.56□□□□□ -0.88
SLF1-204ENST00000475916 EPHA4P54764 986 aa9.56□□□□□ -0.88
SLF1-204ENST00000475916 PDE3BQ13370 1112 aa9.56□□□□□ -0.88
SLF1-204ENST00000475916 RNF166Q96A37 237 aaPredicted RBP9.56□□□□□ -0.88
SLF1-204ENST00000475916 KIAA1522Q9P206 1035 aaPredicted RBP9.56□□□□□ -0.88
SLF1-204ENST00000475916 A0A1W2PRU2 124 aa9.55□□□□□ -0.88
SLF1-204ENST00000475916 SIAH2O43255 324 aa9.55□□□□□ -0.88
SLF1-204ENST00000475916 FOXK2Q01167 660 aa9.55□□□□□ -0.88
SLF1-204ENST00000475916 MTFR1Q15390 333 aa9.55□□□□□ -0.88
SLF1-204ENST00000475916 XAGE2Q96GT9 111 aa9.55□□□□□ -0.88
SLF1-204ENST00000475916 NLRP3Q96P20 1036 aa9.55□□□□□ -0.88
SLF1-204ENST00000475916 C2orf49Q9BVC5 232 aaPredicted RBP9.55□□□□□ -0.88
SLF1-204ENST00000475916 RAB6BQ9NRW1 208 aa9.55□□□□□ -0.88
SLF1-204ENST00000475916 SERTM1A2A2V5 107 aa9.54□□□□□ -0.88
SLF1-204ENST00000475916 TCF3P15923 654 aa9.54□□□□□ -0.88
SLF1-204ENST00000475916 VAMP1P23763 118 aa9.54□□□□□ -0.88
SLF1-204ENST00000475916 BRD2P25440 801 aaKnown RBP9.54□□□□□ -0.88
SLF1-204ENST00000475916 SLC19A1P41440 591 aa9.54□□□□□ -0.88
SLF1-204ENST00000475916 ECM1Q16610 540 aa9.54□□□□□ -0.88
SLF1-204ENST00000475916 TBCELQ5QJ74 424 aa9.54□□□□□ -0.88
SLF1-204ENST00000475916 CNKSR1Q969H4 720 aa9.54□□□□□ -0.88
SLF1-204ENST00000475916 MRGPRX2Q96LB1 330 aa9.54□□□□□ -0.88
SLF1-204ENST00000475916 DMRTB1Q96MA1 342 aa9.54□□□□□ -0.88
SLF1-204ENST00000475916 ESYT1Q9BSJ8 1104 aa9.54□□□□□ -0.88
SLF1-204ENST00000475916 ZNF232Q9UNY5 417 aa9.54□□□□□ -0.88
SLF1-204ENST00000475916 LIAT1Q6ZQX7 453 aa9.53□□□□□ -0.88
SLF1-204ENST00000475916 FBXO33Q7Z6M2 555 aa9.53□□□□□ -0.88
SLF1-204ENST00000475916 USP35Q9P2H5 1018 aa9.53□□□□□ -0.88
SLF1-204ENST00000475916 ALDH1A1P00352 501 aa9.52□□□□□ -0.89
SLF1-204ENST00000475916 ADH1AP07327 375 aa9.52□□□□□ -0.89
SLF1-204ENST00000475916 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
SLF1-204ENST00000475916 EIF1AXP47813 144 aaKnown RBP9.52□□□□□ -0.89
SLF1-204ENST00000475916 PLCB3Q01970 1234 aa9.52□□□□□ -0.89
SLF1-204ENST00000475916 TMC7Q7Z402 723 aa9.52□□□□□ -0.89
SLF1-204ENST00000475916 TTC16Q8NEE8 873 aa9.52□□□□□ -0.89
SLF1-204ENST00000475916 PCSK2P16519 638 aa9.51□□□□□ -0.89
SLF1-204ENST00000475916 USP5P45974 858 aa9.51□□□□□ -0.89
SLF1-204ENST00000475916 ATP2B2Q01814 1243 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms