RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 KCNQ2O43526 872 aa15.77■□□□□ 0.12
MRPL55-227ENST00000475832 APBA3O96018 575 aa15.77■□□□□ 0.12
MRPL55-227ENST00000475832 DCTN1Q14203 1278 aa15.77■□□□□ 0.12
MRPL55-227ENST00000475832 FAM196AQ6ZSG2 479 aa15.77■□□□□ 0.12
MRPL55-227ENST00000475832 ZNF428Q96B54 188 aa15.77■□□□□ 0.12
MRPL55-227ENST00000475832 BABAM1Q9NWV8 329 aa15.77■□□□□ 0.12
MRPL55-227ENST00000475832 TRIM37O94972 964 aa15.76■□□□□ 0.11
MRPL55-227ENST00000475832 HSP90AB1P08238 724 aaKnown RBP15.76■□□□□ 0.11
MRPL55-227ENST00000475832 ZNF853P0CG23 659 aa15.76■□□□□ 0.11
MRPL55-227ENST00000475832 CANXP27824 592 aaKnown RBP15.76■□□□□ 0.11
MRPL55-227ENST00000475832 EXOSC9Q06265 439 aaKnown RBP15.76■□□□□ 0.11
MRPL55-227ENST00000475832 DDB1Q16531 1140 aa15.76■□□□□ 0.11
MRPL55-227ENST00000475832 BCL9O00512 1426 aa15.75■□□□□ 0.11
MRPL55-227ENST00000475832 CHL1O00533 1208 aa15.74■□□□□ 0.11
MRPL55-227ENST00000475832 IL2RBP14784 551 aa15.74■□□□□ 0.11
MRPL55-227ENST00000475832 TEFQ10587 303 aa15.74■□□□□ 0.11
MRPL55-227ENST00000475832 IFNL2Q8IZJ0 200 aa15.74■□□□□ 0.11
MRPL55-227ENST00000475832 MBIPQ9NS73 344 aa15.74■□□□□ 0.11
MRPL55-227ENST00000475832 TSPYL4Q9UJ04 414 aa15.74■□□□□ 0.11
MRPL55-227ENST00000475832 TAF7Q15545 349 aaPredicted RBP15.73■□□□□ 0.11
MRPL55-227ENST00000475832 OVOS2A0A0G2JMS6 1433 aa15.73■□□□□ 0.11
MRPL55-227ENST00000475832 TNS2Q63HR2 1409 aa15.73■□□□□ 0.11
MRPL55-227ENST00000475832 EXOC5O00471 708 aa15.72■□□□□ 0.11
MRPL55-227ENST00000475832 RARSP54136 660 aaKnown RBP15.72■□□□□ 0.11
MRPL55-227ENST00000475832 MARCH10Q8NA82 808 aaPredicted RBP15.72■□□□□ 0.11
MRPL55-227ENST00000475832 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
MRPL55-227ENST00000475832 CHMP4AQ9BY43 222 aa15.72■□□□□ 0.11
MRPL55-227ENST00000475832 MS4A1P11836 297 aa15.71■□□□□ 0.11
MRPL55-227ENST00000475832 IRX6P78412 446 aaPredicted RBP15.71■□□□□ 0.11
MRPL55-227ENST00000475832 ALDH1L2Q3SY69 923 aa15.71■□□□□ 0.11
MRPL55-227ENST00000475832 IL17REQ8NFR9 667 aa15.71■□□□□ 0.11
MRPL55-227ENST00000475832 RGPD2P0DJD1 1756 aa15.71■□□□□ 0.11
MRPL55-227ENST00000475832 PCDH11XQ9BZA7 1347 aa15.7■□□□□ 0.1
MRPL55-227ENST00000475832 PCDH11YQ9BZA8 1340 aa15.7■□□□□ 0.1
MRPL55-227ENST00000475832 MEGF6O75095 1541 aa15.7■□□□□ 0.1
MRPL55-227ENST00000475832 RNMTO43148 476 aaKnown RBP15.7■□□□□ 0.1
MRPL55-227ENST00000475832 TWISTNBQ3B726 338 aaPredicted RBP15.7■□□□□ 0.1
MRPL55-227ENST00000475832 SMC4Q9NTJ3 1288 aa15.7■□□□□ 0.1
MRPL55-227ENST00000475832 TNS1Q9HBL0 1735 aaKnown RBP15.7■□□□□ 0.1
MRPL55-227ENST00000475832 DLG5Q8TDM6 1919 aa15.7■□□□□ 0.1
MRPL55-227ENST00000475832 SOS1Q07889 1333 aaPredicted RBP15.69■□□□□ 0.1
MRPL55-227ENST00000475832 PHKG2P15735 406 aa15.69■□□□□ 0.1
MRPL55-227ENST00000475832 MPRIPQ6WCQ1 1025 aa15.69■□□□□ 0.1
MRPL55-227ENST00000475832 DCAF5Q96JK2 942 aa15.69■□□□□ 0.1
MRPL55-227ENST00000475832 CEMIPQ8WUJ3 1361 aa15.69■□□□□ 0.1
MRPL55-227ENST00000475832 IPO8O15397 1037 aaKnown RBP15.68■□□□□ 0.1
MRPL55-227ENST00000475832 BCAR3O75815 825 aa15.68■□□□□ 0.1
MRPL55-227ENST00000475832 KIF16BQ96L93 1317 aa15.68■□□□□ 0.1
MRPL55-227ENST00000475832 FRAT1Q92837 279 aaPredicted RBP15.67■□□□□ 0.1
MRPL55-227ENST00000475832 LGR6Q9HBX8 967 aa15.67■□□□□ 0.1
MRPL55-227ENST00000475832 BTBD11A6QL63 1104 aa15.66■□□□□ 0.1
MRPL55-227ENST00000475832 VAMP4O75379 141 aa15.66■□□□□ 0.1
MRPL55-227ENST00000475832 PDE3AQ14432 1141 aa15.66■□□□□ 0.1
MRPL55-227ENST00000475832 PPP4R2Q9NY27 417 aa15.66■□□□□ 0.1
MRPL55-227ENST00000475832 SBF2Q86WG5 1849 aa15.66■□□□□ 0.1
MRPL55-227ENST00000475832 PLIN1O60240 522 aa15.65■□□□□ 0.1
MRPL55-227ENST00000475832 GIGYF1O75420 1035 aaPredicted RBP15.65■□□□□ 0.1
MRPL55-227ENST00000475832 ZKSCAN2Q63HK3 967 aa15.65■□□□□ 0.1
MRPL55-227ENST00000475832 MIS18AQ9NYP9 233 aa15.65■□□□□ 0.1
MRPL55-227ENST00000475832 ELL2O00472 640 aaPredicted RBP15.64■□□□□ 0.09
MRPL55-227ENST00000475832 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
MRPL55-227ENST00000475832 SSH1Q8WYL5 1049 aa15.64■□□□□ 0.09
MRPL55-227ENST00000475832 BCL11BQ9C0K0 894 aaPredicted RBP15.64■□□□□ 0.09
MRPL55-227ENST00000475832 UTRNP46939 3433 aa15.64■□□□□ 0.09
MRPL55-227ENST00000475832 SHANK3Q9BYB0 1731 aa15.63■□□□□ 0.09
MRPL55-227ENST00000475832 CYP27B1O15528 508 aa15.63■□□□□ 0.09
MRPL55-227ENST00000475832 CABP4P57796 275 aa15.63■□□□□ 0.09
MRPL55-227ENST00000475832 FTSJ3Q8IY81 847 aaKnown RBP15.63■□□□□ 0.09
MRPL55-227ENST00000475832 DDX54Q8TDD1 881 aaKnown RBP15.63■□□□□ 0.09
MRPL55-227ENST00000475832 BCL2L13Q9BXK5 485 aa15.63■□□□□ 0.09
MRPL55-227ENST00000475832 SLC52A2Q9HAB3 445 aa15.63■□□□□ 0.09
MRPL55-227ENST00000475832 PKD1L3Q7Z443 1732 aa15.63■□□□□ 0.09
MRPL55-227ENST00000475832 ERVV-2B6SEH9 535 aa15.62■□□□□ 0.09
MRPL55-227ENST00000475832 BRPF1P55201 1214 aaPredicted RBP15.62■□□□□ 0.09
MRPL55-227ENST00000475832 TSPYL6Q8N831 410 aa15.62■□□□□ 0.09
MRPL55-227ENST00000475832 STK31Q9BXU1 1019 aa15.62■□□□□ 0.09
MRPL55-227ENST00000475832 PLSCR1O15162 318 aa15.61■□□□□ 0.09
MRPL55-227ENST00000475832 HOXB7P09629 217 aa15.61■□□□□ 0.09
MRPL55-227ENST00000475832 NKX1-1Q15270 411 aaPredicted RBP15.61■□□□□ 0.09
MRPL55-227ENST00000475832 CCDC30Q5VVM6 783 aa15.61■□□□□ 0.09
MRPL55-227ENST00000475832 PTF1AQ7RTS3 328 aa15.61■□□□□ 0.09
MRPL55-227ENST00000475832 PELP1Q8IZL8 1130 aaKnown RBP15.61■□□□□ 0.09
MRPL55-227ENST00000475832 TTC5Q8N0Z6 440 aa15.61■□□□□ 0.09
MRPL55-227ENST00000475832 RGPD3A6NKT7 1758 aaPredicted RBP15.6■□□□□ 0.09
MRPL55-227ENST00000475832 RGPD4Q7Z3J3 1758 aa15.6■□□□□ 0.09
MRPL55-227ENST00000475832 NHSQ6T4R5 1651 aa15.6■□□□□ 0.09
MRPL55-227ENST00000475832 AAMPQ13685 434 aa15.59■□□□□ 0.09
MRPL55-227ENST00000475832 ATF7IPQ6VMQ6 1270 aa15.59■□□□□ 0.09
MRPL55-227ENST00000475832 DZIP1LQ8IYY4 767 aaKnown RBP15.59■□□□□ 0.09
MRPL55-227ENST00000475832 MRPL50Q8N5N7 158 aaKnown RBP15.59■□□□□ 0.09
MRPL55-227ENST00000475832 ARHGAP45Q92619 1136 aa15.59■□□□□ 0.09
MRPL55-227ENST00000475832 CRBNQ96SW2 442 aa15.59■□□□□ 0.09
MRPL55-227ENST00000475832 API5Q9BZZ5 524 aaKnown RBP15.59■□□□□ 0.09
MRPL55-227ENST00000475832 NOB1Q9ULX3 412 aaKnown RBP15.59■□□□□ 0.09
MRPL55-227ENST00000475832 NUP188Q5SRE5 1749 aa15.59■□□□□ 0.09
MRPL55-227ENST00000475832 KDM6AO15550 1401 aaPredicted RBP15.59■□□□□ 0.09
MRPL55-227ENST00000475832 RREB1Q92766 1687 aa15.58■□□□□ 0.08
MRPL55-227ENST00000475832 EIF4A1P60842 406 aaKnown RBP15.58■□□□□ 0.08
MRPL55-227ENST00000475832 NFATC2IPQ8NCF5 419 aa15.58■□□□□ 0.08
MRPL55-227ENST00000475832 EXOC6Q8TAG9 804 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms