RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 IP6K1Q92551 441 aa14.81□□□□□ -0.04
CALD1-217ENST00000475772 SYT17Q9BSW7 474 aa14.81□□□□□ -0.04
CALD1-217ENST00000475772 EDC4Q6P2E9 1401 aaKnown RBP14.81□□□□□ -0.04
CALD1-217ENST00000475772 ZNF827Q17R98 1081 aa14.8□□□□□ -0.04
CALD1-217ENST00000475772 TESK2Q96S53 571 aa14.8□□□□□ -0.04
CALD1-217ENST00000475772 FHDC1Q9C0D6 1143 aaPredicted RBP14.8□□□□□ -0.04
CALD1-217ENST00000475772 MTFR1LQ9H019 292 aa14.8□□□□□ -0.04
CALD1-217ENST00000475772 RGPD2P0DJD1 1756 aa14.79□□□□□ -0.04
CALD1-217ENST00000475772 MS4A4AQ96JQ5 239 aa14.79□□□□□ -0.04
CALD1-217ENST00000475772 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
CALD1-217ENST00000475772 LTV1Q96GA3 475 aaPredicted RBP14.77□□□□□ -0.05
CALD1-217ENST00000475772 TERF2IPQ9NYB0 399 aa14.77□□□□□ -0.05
CALD1-217ENST00000475772 CHD4Q14839 1912 aa14.76□□□□□ -0.05
CALD1-217ENST00000475772 ST20-MTHFSA0A0A6YYL1 179 aa14.76□□□□□ -0.05
CALD1-217ENST00000475772 MAP3K19Q56UN5 1328 aa14.75□□□□□ -0.05
CALD1-217ENST00000475772 HOXC9P31274 260 aa14.75□□□□□ -0.05
CALD1-217ENST00000475772 DPY19L2Q6NUT2 758 aa14.75□□□□□ -0.05
CALD1-217ENST00000475772 DDX54Q8TDD1 881 aaKnown RBP14.75□□□□□ -0.05
CALD1-217ENST00000475772 KCNQ4P56696 695 aa14.74□□□□□ -0.05
CALD1-217ENST00000475772 ARXQ96QS3 562 aa14.74□□□□□ -0.05
CALD1-217ENST00000475772 COL24A1Q17RW2 1714 aa14.74□□□□□ -0.05
CALD1-217ENST00000475772 SHANK3Q9BYB0 1731 aa14.74□□□□□ -0.05
CALD1-217ENST00000475772 FAM208AQ9UK61 1670 aaKnown RBP14.74□□□□□ -0.05
CALD1-217ENST00000475772 ZNF784Q8NCA9 323 aaPredicted RBP14.73□□□□□ -0.05
CALD1-217ENST00000475772 TUBGCP6Q96RT7 1819 aa14.73□□□□□ -0.05
CALD1-217ENST00000475772 TONSLQ96HA7 1378 aa14.73□□□□□ -0.05
CALD1-217ENST00000475772 QSER1Q2KHR3 1735 aa14.72□□□□□ -0.05
CALD1-217ENST00000475772 PRIM1P49642 420 aaKnown RBP14.72□□□□□ -0.05
CALD1-217ENST00000475772 COG3Q96JB2 828 aa14.72□□□□□ -0.05
CALD1-217ENST00000475772 GOLGB1Q14789 3259 aaKnown RBP14.72□□□□□ -0.05
CALD1-217ENST00000475772 NSD2O96028 1365 aa14.72□□□□□ -0.05
CALD1-217ENST00000475772 PNPLA7Q6ZV29 1317 aa14.71□□□□□ -0.05
CALD1-217ENST00000475772 GTPBP6O43824 516 aaPredicted RBP14.71□□□□□ -0.05
CALD1-217ENST00000475772 NBPF6Q5VWK0 638 aa14.71□□□□□ -0.05
CALD1-217ENST00000475772 NBPF4Q96M43 638 aa14.71□□□□□ -0.05
CALD1-217ENST00000475772 LY75O60449 1722 aa14.71□□□□□ -0.05
CALD1-217ENST00000475772 MAP3K5Q99683 1374 aa14.71□□□□□ -0.06
CALD1-217ENST00000475772 FYB1O15117 783 aa14.7□□□□□ -0.06
CALD1-217ENST00000475772 POTEJP0CG39 1038 aa14.7□□□□□ -0.06
CALD1-217ENST00000475772 RRS1Q15050 365 aaKnown RBP14.7□□□□□ -0.06
CALD1-217ENST00000475772 SLC27A3Q5K4L6 730 aa14.7□□□□□ -0.06
CALD1-217ENST00000475772 ZCRB1Q8TBF4 217 aaKnown RBP14.7□□□□□ -0.06
CALD1-217ENST00000475772 DOT1LQ8TEK3 1739 aa14.69□□□□□ -0.06
CALD1-217ENST00000475772 AMPHP49418 695 aa14.69□□□□□ -0.06
CALD1-217ENST00000475772 SLC16A10Q8TF71 515 aa14.69□□□□□ -0.06
CALD1-217ENST00000475772 MEGF6O75095 1541 aa14.69□□□□□ -0.06
CALD1-217ENST00000475772 ANKRD36BQ8N2N9 1353 aa14.69□□□□□ -0.06
CALD1-217ENST00000475772 SYTL4Q96C24 671 aaPredicted RBP14.68□□□□□ -0.06
CALD1-217ENST00000475772 GGNBP2Q9H3C7 697 aa14.68□□□□□ -0.06
CALD1-217ENST00000475772 LHX8Q68G74 356 aa14.67□□□□□ -0.06
CALD1-217ENST00000475772 USHBP1Q8N6Y0 703 aa14.67□□□□□ -0.06
CALD1-217ENST00000475772 RYDENQ9NUL5 291 aaKnown RBP14.66□□□□□ -0.06
CALD1-217ENST00000475772 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.66□□□□□ -0.06
CALD1-217ENST00000475772 HSP90AB2PQ58FF8 381 aa14.65□□□□□ -0.06
CALD1-217ENST00000475772 TFCP2L1Q9NZI6 479 aa14.65□□□□□ -0.06
CALD1-217ENST00000475772 SLC24A1O60721 1099 aa14.64□□□□□ -0.07
CALD1-217ENST00000475772 PPP1R37O75864 691 aa14.64□□□□□ -0.07
CALD1-217ENST00000475772 COL23A1Q86Y22 540 aaPredicted RBP14.64□□□□□ -0.07
CALD1-217ENST00000475772 L3MBTL3Q96JM7 780 aaPredicted RBP14.64□□□□□ -0.07
CALD1-217ENST00000475772 RTL1A6NKG5 1358 aa14.63□□□□□ -0.07
CALD1-217ENST00000475772 NLGN2Q8NFZ4 835 aa14.63□□□□□ -0.07
CALD1-217ENST00000475772 CARD14Q9BXL6 1004 aa14.63□□□□□ -0.07
CALD1-217ENST00000475772 CCNL1Q9UK58 526 aaPredicted RBP14.63□□□□□ -0.07
CALD1-217ENST00000475772 POLD1P28340 1107 aa14.62□□□□□ -0.07
CALD1-217ENST00000475772 TMF1P82094 1093 aa14.62□□□□□ -0.07
CALD1-217ENST00000475772 GPR162Q16538 588 aa14.62□□□□□ -0.07
CALD1-217ENST00000475772 TAF1LQ8IZX4 1826 aa14.62□□□□□ -0.07
CALD1-217ENST00000475772 BOLA1Q9Y3E2 137 aa14.61□□□□□ -0.07
CALD1-217ENST00000475772 CGNL1Q0VF96 1302 aa14.61□□□□□ -0.07
CALD1-217ENST00000475772 INSRP06213 1382 aa14.6□□□□□ -0.07
CALD1-217ENST00000475772 ITGB4P16144 1822 aa14.6□□□□□ -0.07
CALD1-217ENST00000475772 CYP27B1O15528 508 aa14.6□□□□□ -0.07
CALD1-217ENST00000475772 SPRYD3Q8NCJ5 442 aa14.6□□□□□ -0.07
CALD1-217ENST00000475772 TMEM121BQ9BXQ6 578 aaPredicted RBP14.6□□□□□ -0.07
CALD1-217ENST00000475772 USP47Q96K76 1375 aa14.6□□□□□ -0.07
CALD1-217ENST00000475772 KIF20BQ96Q89 1820 aa14.59□□□□□ -0.07
CALD1-217ENST00000475772 TATP17735 454 aaPredicted RBP14.59□□□□□ -0.07
CALD1-217ENST00000475772 C1QTNF8P60827 252 aa14.59□□□□□ -0.07
CALD1-217ENST00000475772 RAPGEF4Q8WZA2 1011 aa14.59□□□□□ -0.07
CALD1-217ENST00000475772 MAP2P11137 1827 aaKnown RBP14.58□□□□□ -0.08
CALD1-217ENST00000475772 YBX3P16989 372 aaKnown RBP eCLIP14.58□□□□□ -0.08
CALD1-217ENST00000475772 AMIGO3Q86WK7 504 aa14.58□□□□□ -0.08
CALD1-217ENST00000475772 EMILIN1Q9Y6C2 1016 aa14.58□□□□□ -0.08
CALD1-217ENST00000475772 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.08
CALD1-217ENST00000475772 PAXIP1Q6ZW49 1069 aaPredicted RBP14.57□□□□□ -0.08
CALD1-217ENST00000475772 MICALL2Q8IY33 904 aa14.57□□□□□ -0.08
CALD1-217ENST00000475772 C5P01031 1676 aa14.57□□□□□ -0.08
CALD1-217ENST00000475772 FLT4P35916 1363 aa14.57□□□□□ -0.08
CALD1-217ENST00000475772 MSL1Q68DK7 614 aa14.56□□□□□ -0.08
CALD1-217ENST00000475772 MPRIPQ6WCQ1 1025 aa14.56□□□□□ -0.08
CALD1-217ENST00000475772 SMIM5Q71RC9 77 aa14.56□□□□□ -0.08
CALD1-217ENST00000475772 KIF24Q5T7B8 1368 aa14.56□□□□□ -0.08
CALD1-217ENST00000475772 PCDH11XQ9BZA7 1347 aa14.55□□□□□ -0.08
CALD1-217ENST00000475772 PCDH11YQ9BZA8 1340 aa14.55□□□□□ -0.08
CALD1-217ENST00000475772 PALLDQ8WX93 1383 aa14.55□□□□□ -0.08
CALD1-217ENST00000475772 NCAPD2Q15021 1401 aa14.55□□□□□ -0.08
CALD1-217ENST00000475772 PIGBQ92521 554 aa14.54□□□□□ -0.08
CALD1-217ENST00000475772 CFAP44Q96MT7 982 aa14.54□□□□□ -0.08
CALD1-217ENST00000475772 SMG6Q86US8 1419 aaKnown RBP14.54□□□□□ -0.08
CALD1-217ENST00000475772 PKD1L3Q7Z443 1732 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms