RNA–Protein interactions for RNA: ENST00000475727.1

LHX9-205, Transcript of LIM homeobox 9, humanhuman

TSL 1 (best)

Gene LHX9, Length 259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-205ENST00000475727 TTC5Q8N0Z6 440 aa14.1□□□□□ -0.15
LHX9-205ENST00000475727 MYH16Q9H6N6 1097 aa14.1□□□□□ -0.15
LHX9-205ENST00000475727 IFT57Q9NWB7 429 aa14.1□□□□□ -0.15
LHX9-205ENST00000475727 BABAM1Q9NWV8 329 aa14.1□□□□□ -0.15
LHX9-205ENST00000475727 TSPYL4Q9UJ04 414 aa14.1□□□□□ -0.15
LHX9-205ENST00000475727 ITGB4P16144 1822 aa14.09□□□□□ -0.15
LHX9-205ENST00000475727 KCNQ2O43526 872 aa14.09□□□□□ -0.15
LHX9-205ENST00000475727 TRIM37O94972 964 aa14.09□□□□□ -0.15
LHX9-205ENST00000475727 PIGBQ92521 554 aa14.09□□□□□ -0.15
LHX9-205ENST00000475727 CFAP44Q96MT7 982 aa14.09□□□□□ -0.15
LHX9-205ENST00000475727 BCL11BQ9C0K0 894 aaPredicted RBP14.09□□□□□ -0.15
LHX9-205ENST00000475727 MRC1P22897 1456 aa14.09□□□□□ -0.15
LHX9-205ENST00000475727 TOGARAM1Q9Y4F4 1720 aa14.09□□□□□ -0.15
LHX9-205ENST00000475727 ZNF521Q96K83 1311 aa14.09□□□□□ -0.15
LHX9-205ENST00000475727 E9PSI1 815 aa14.08□□□□□ -0.16
LHX9-205ENST00000475727 SF3B2Q13435 895 aaKnown RBP14.08□□□□□ -0.16
LHX9-205ENST00000475727 SMARCC1Q92922 1105 aaPredicted RBP14.08□□□□□ -0.16
LHX9-205ENST00000475727 SBF2Q86WG5 1849 aa14.08□□□□□ -0.16
LHX9-205ENST00000475727 NHSQ6T4R5 1651 aa14.07□□□□□ -0.16
LHX9-205ENST00000475727 CHL1O00533 1208 aa14.07□□□□□ -0.16
LHX9-205ENST00000475727 MIS18AQ9NYP9 233 aa14.07□□□□□ -0.16
LHX9-205ENST00000475727 SLC39A6Q13433 755 aa14.06□□□□□ -0.16
LHX9-205ENST00000475727 ZNF790Q6PG37 636 aa14.06□□□□□ -0.16
LHX9-205ENST00000475727 SIPA1L3O60292 1781 aaPredicted RBP14.06□□□□□ -0.16
LHX9-205ENST00000475727 ZNF853P0CG23 659 aa14.05□□□□□ -0.16
LHX9-205ENST00000475727 MBIPQ9NS73 344 aa14.05□□□□□ -0.16
LHX9-205ENST00000475727 APBA3O96018 575 aa14.04□□□□□ -0.16
LHX9-205ENST00000475727 SLFN5Q08AF3 891 aa14.04□□□□□ -0.16
LHX9-205ENST00000475727 TSR2Q969E8 191 aaKnown RBP14.04□□□□□ -0.16
LHX9-205ENST00000475727 FMNL2Q96PY5 1086 aa14.04□□□□□ -0.16
LHX9-205ENST00000475727 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
LHX9-205ENST00000475727 ATG3Q9NT62 314 aa14.04□□□□□ -0.16
LHX9-205ENST00000475727 ASAP1Q9ULH1 1129 aa14.04□□□□□ -0.16
LHX9-205ENST00000475727 BTAF1O14981 1849 aa14.04□□□□□ -0.16
LHX9-205ENST00000475727 PTCD1O75127 700 aaKnown RBP14.03□□□□□ -0.16
LHX9-205ENST00000475727 CCDC125Q86Z20 511 aa14.03□□□□□ -0.16
LHX9-205ENST00000475727 CDCA7LQ96GN5 454 aa14.03□□□□□ -0.16
LHX9-205ENST00000475727 PALLDQ8WX93 1383 aa14.03□□□□□ -0.16
LHX9-205ENST00000475727 FANCIQ9NVI1 1328 aa14.02□□□□□ -0.17
LHX9-205ENST00000475727 KCNQ3O43525 872 aa14.02□□□□□ -0.17
LHX9-205ENST00000475727 PTF1AQ7RTS3 328 aa14.02□□□□□ -0.17
LHX9-205ENST00000475727 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
LHX9-205ENST00000475727 HMGB2P26583 209 aaKnown RBP14.01□□□□□ -0.17
LHX9-205ENST00000475727 BAG6P46379 1132 aa14.01□□□□□ -0.17
LHX9-205ENST00000475727 EIF4A1P60842 406 aaKnown RBP14.01□□□□□ -0.17
LHX9-205ENST00000475727 KDM3BQ7LBC6 1761 aa14.01□□□□□ -0.17
LHX9-205ENST00000475727 SNRPA1P09661 255 aaKnown RBP14□□□□□ -0.17
LHX9-205ENST00000475727 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
LHX9-205ENST00000475727 CHMP4AQ9BY43 222 aa14□□□□□ -0.17
LHX9-205ENST00000475727 HEG1Q9ULI3 1381 aa13.99□□□□□ -0.17
LHX9-205ENST00000475727 LOC102724428A0A0B4J2F2 783 aa13.99□□□□□ -0.17
LHX9-205ENST00000475727 PLSCR1O15162 318 aa13.99□□□□□ -0.17
LHX9-205ENST00000475727 ATP6V1AP38606 617 aa13.99□□□□□ -0.17
LHX9-205ENST00000475727 SIK1P57059 783 aa13.99□□□□□ -0.17
LHX9-205ENST00000475727 EXOSC9Q06265 439 aaKnown RBP13.99□□□□□ -0.17
LHX9-205ENST00000475727 DUSP27Q5VZP5 1158 aa13.99□□□□□ -0.17
LHX9-205ENST00000475727 VSIG10Q8N0Z9 540 aa13.99□□□□□ -0.17
LHX9-205ENST00000475727 TEX13AQ9BXU3 409 aaPredicted RBP13.99□□□□□ -0.17
LHX9-205ENST00000475727 PAPPAQ13219 1627 aa13.99□□□□□ -0.17
LHX9-205ENST00000475727 ELL2O00472 640 aaPredicted RBP13.98□□□□□ -0.17
LHX9-205ENST00000475727 ILDR2Q71H61 639 aa13.98□□□□□ -0.17
LHX9-205ENST00000475727 TRMT2AQ8IZ69 625 aaKnown RBP13.98□□□□□ -0.17
LHX9-205ENST00000475727 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
LHX9-205ENST00000475727 SOS1Q07889 1333 aaPredicted RBP13.97□□□□□ -0.17
LHX9-205ENST00000475727 UBR2Q8IWV8 1755 aa13.97□□□□□ -0.17
LHX9-205ENST00000475727 HOXB7P09629 217 aa13.97□□□□□ -0.17
LHX9-205ENST00000475727 TWISTNBQ3B726 338 aaPredicted RBP13.97□□□□□ -0.17
LHX9-205ENST00000475727 SLC27A3Q5K4L6 730 aa13.97□□□□□ -0.17
LHX9-205ENST00000475727 TNS1Q9HBL0 1735 aaKnown RBP13.97□□□□□ -0.17
LHX9-205ENST00000475727 KCPQ6ZWJ8 1503 aa13.96□□□□□ -0.17
LHX9-205ENST00000475727 GIGYF1O75420 1035 aaPredicted RBP13.96□□□□□ -0.17
LHX9-205ENST00000475727 STARD3NLO95772 234 aa13.96□□□□□ -0.17
LHX9-205ENST00000475727 C8orf58Q8NAV2 365 aa13.96□□□□□ -0.17
LHX9-205ENST00000475727 CT47B1P0C2W7 299 aaPredicted RBP13.95□□□□□ -0.18
LHX9-205ENST00000475727 EIF2S2P20042 333 aaKnown RBP13.95□□□□□ -0.18
LHX9-205ENST00000475727 EN1Q05925 392 aaPredicted RBP13.95□□□□□ -0.18
LHX9-205ENST00000475727 TXNRD1Q16881 649 aa13.95□□□□□ -0.18
LHX9-205ENST00000475727 KRT24Q2M2I5 525 aa13.95□□□□□ -0.18
LHX9-205ENST00000475727 DNAJC10Q8IXB1 793 aa13.95□□□□□ -0.18
LHX9-205ENST00000475727 UPF1Q92900 1129 aaKnown RBP eCLIP13.95□□□□□ -0.18
LHX9-205ENST00000475727 LY75O60449 1722 aa13.94□□□□□ -0.18
LHX9-205ENST00000475727 HDGFL1Q5TGJ6 251 aa13.94□□□□□ -0.18
LHX9-205ENST00000475727 TSPYL6Q8N831 410 aa13.94□□□□□ -0.18
LHX9-205ENST00000475727 CCDC30Q5VVM6 783 aa13.93□□□□□ -0.18
LHX9-205ENST00000475727 DEFB132Q7Z7B7 95 aa13.93□□□□□ -0.18
LHX9-205ENST00000475727 NPM2Q86SE8 214 aaKnown RBP13.93□□□□□ -0.18
LHX9-205ENST00000475727 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
LHX9-205ENST00000475727 SLC4A9Q96Q91 983 aa13.93□□□□□ -0.18
LHX9-205ENST00000475727 STK31Q9BXU1 1019 aa13.93□□□□□ -0.18
LHX9-205ENST00000475727 USP16Q9Y5T5 823 aa13.93□□□□□ -0.18
LHX9-205ENST00000475727 RGPD3A6NKT7 1758 aaPredicted RBP13.92□□□□□ -0.18
LHX9-205ENST00000475727 RGPD4Q7Z3J3 1758 aa13.92□□□□□ -0.18
LHX9-205ENST00000475727 PRAMEF22A3QJZ6 481 aa13.92□□□□□ -0.18
LHX9-205ENST00000475727 VAMP4O75379 141 aa13.92□□□□□ -0.18
LHX9-205ENST00000475727 KCNQ4P56696 695 aa13.92□□□□□ -0.18
LHX9-205ENST00000475727 EZH2Q15910 746 aaKnown RBP13.92□□□□□ -0.18
LHX9-205ENST00000475727 NECTIN2Q92692 538 aa13.92□□□□□ -0.18
LHX9-205ENST00000475727 CAMKK2Q96RR4 588 aa13.92□□□□□ -0.18
LHX9-205ENST00000475727 ZNF831Q5JPB2 1677 aa13.91□□□□□ -0.18
LHX9-205ENST00000475727 EP400Q96L91 3159 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms