RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 HMOX1P09601 288 aa10.73□□□□□ -0.69
HLA-DMA-207ENST00000475627 PRKAR2BP31323 418 aa10.73□□□□□ -0.69
HLA-DMA-207ENST00000475627 IL27Q8NEV9 243 aa10.73□□□□□ -0.69
HLA-DMA-207ENST00000475627 NECTIN2Q92692 538 aa10.73□□□□□ -0.69
HLA-DMA-207ENST00000475627 USP35Q9P2H5 1018 aa10.73□□□□□ -0.69
HLA-DMA-207ENST00000475627 ADAMTS8Q9UP79 889 aa10.73□□□□□ -0.69
HLA-DMA-207ENST00000475627 A0A0G2JS52 829 aa10.72□□□□□ -0.69
HLA-DMA-207ENST00000475627 HSP90AB1P08238 724 aaKnown RBP10.72□□□□□ -0.69
HLA-DMA-207ENST00000475627 MYT1Q01538 1121 aa10.72□□□□□ -0.69
HLA-DMA-207ENST00000475627 C1orf141Q5JVX7 400 aa10.72□□□□□ -0.69
HLA-DMA-207ENST00000475627 FAM212AQ96EL1 285 aa10.72□□□□□ -0.69
HLA-DMA-207ENST00000475627 GJD4Q96KN9 370 aaPredicted RBP10.72□□□□□ -0.69
HLA-DMA-207ENST00000475627 AK7Q96M32 723 aa10.72□□□□□ -0.69
HLA-DMA-207ENST00000475627 PCDH11XQ9BZA7 1347 aa10.72□□□□□ -0.69
HLA-DMA-207ENST00000475627 PCDH11YQ9BZA8 1340 aa10.72□□□□□ -0.69
HLA-DMA-207ENST00000475627 OVOS2A0A0G2JMS6 1433 aa10.72□□□□□ -0.69
HLA-DMA-207ENST00000475627 RBM6P78332 1123 aaKnown RBP10.71□□□□□ -0.69
HLA-DMA-207ENST00000475627 CALD1Q05682 793 aaKnown RBP10.71□□□□□ -0.69
HLA-DMA-207ENST00000475627 E2F4Q16254 413 aa10.71□□□□□ -0.69
HLA-DMA-207ENST00000475627 CCDC184Q52MB2 194 aa10.71□□□□□ -0.69
HLA-DMA-207ENST00000475627 QTRT2Q9H974 415 aaKnown RBP10.71□□□□□ -0.69
HLA-DMA-207ENST00000475627 TNS2Q63HR2 1409 aa10.7□□□□□ -0.7
HLA-DMA-207ENST00000475627 APBB1O00213 710 aa10.7□□□□□ -0.7
HLA-DMA-207ENST00000475627 EXOC5O00471 708 aa10.7□□□□□ -0.7
HLA-DMA-207ENST00000475627 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
HLA-DMA-207ENST00000475627 USHBP1Q8N6Y0 703 aa10.7□□□□□ -0.7
HLA-DMA-207ENST00000475627 RTF1Q92541 710 aaKnown RBP10.7□□□□□ -0.7
HLA-DMA-207ENST00000475627 KDM4CQ9H3R0 1056 aa10.7□□□□□ -0.7
HLA-DMA-207ENST00000475627 WNK3Q9BYP7 1800 aa10.7□□□□□ -0.7
HLA-DMA-207ENST00000475627 HTATSF1O43719 755 aaKnown RBP10.69□□□□□ -0.7
HLA-DMA-207ENST00000475627 RXRBP28702 533 aa10.69□□□□□ -0.7
HLA-DMA-207ENST00000475627 DDB1Q16531 1140 aa10.69□□□□□ -0.7
HLA-DMA-207ENST00000475627 AEBP1Q8IUX7 1158 aa10.69□□□□□ -0.7
HLA-DMA-207ENST00000475627 ZCRB1Q8TBF4 217 aaKnown RBP10.69□□□□□ -0.7
HLA-DMA-207ENST00000475627 MEGF6O75095 1541 aa10.68□□□□□ -0.7
HLA-DMA-207ENST00000475627 DISP2A7MBM2 1401 aa10.68□□□□□ -0.7
HLA-DMA-207ENST00000475627 PKD1L3Q7Z443 1732 aa10.68□□□□□ -0.7
HLA-DMA-207ENST00000475627 PDE3BQ13370 1112 aa10.68□□□□□ -0.7
HLA-DMA-207ENST00000475627 NFE2L2Q16236 605 aa10.68□□□□□ -0.7
HLA-DMA-207ENST00000475627 AKAP4Q5JQC9 854 aa10.68□□□□□ -0.7
HLA-DMA-207ENST00000475627 SMYD5Q6GMV2 418 aa10.68□□□□□ -0.7
HLA-DMA-207ENST00000475627 ZNF530Q6P9A1 599 aaPredicted RBP10.68□□□□□ -0.7
HLA-DMA-207ENST00000475627 IFNL2Q8IZJ0 200 aa10.68□□□□□ -0.7
HLA-DMA-207ENST00000475627 PLEKHF1Q96S99 279 aa10.68□□□□□ -0.7
HLA-DMA-207ENST00000475627 RGPD2P0DJD1 1756 aa10.67□□□□□ -0.7
HLA-DMA-207ENST00000475627 MAP3K5Q99683 1374 aa10.67□□□□□ -0.7
HLA-DMA-207ENST00000475627 GNAT3A8MTJ3 354 aa10.67□□□□□ -0.7
HLA-DMA-207ENST00000475627 FAM98CQ17RN3 349 aaKnown RBP10.67□□□□□ -0.7
HLA-DMA-207ENST00000475627 CCDC146Q8IYE0 955 aa10.67□□□□□ -0.7
HLA-DMA-207ENST00000475627 HNRNPUQ00839 825 aaKnown RBP eCLIP10.66□□□□□ -0.7
HLA-DMA-207ENST00000475627 CCDC27Q2M243 656 aa10.66□□□□□ -0.7
HLA-DMA-207ENST00000475627 LRRC37A3O60309 1634 aa10.66□□□□□ -0.7
HLA-DMA-207ENST00000475627 GLI3P10071 1580 aa10.65□□□□□ -0.7
HLA-DMA-207ENST00000475627 APAF1O14727 1248 aa10.65□□□□□ -0.7
HLA-DMA-207ENST00000475627 ONECUT3O60422 494 aaPredicted RBP10.65□□□□□ -0.7
HLA-DMA-207ENST00000475627 TMPOP42166 694 aaKnown RBP10.65□□□□□ -0.7
HLA-DMA-207ENST00000475627 RIPK4P57078 832 aa10.65□□□□□ -0.7
HLA-DMA-207ENST00000475627 DCAF5Q96JK2 942 aa10.65□□□□□ -0.7
HLA-DMA-207ENST00000475627 THSD7AQ9UPZ6 1657 aa10.65□□□□□ -0.7
HLA-DMA-207ENST00000475627 MTHFSDQ2M296 383 aaKnown RBP10.64□□□□□ -0.71
HLA-DMA-207ENST00000475627 ZBED9Q6R2W3 1325 aa10.63□□□□□ -0.71
HLA-DMA-207ENST00000475627 PHKG2P15735 406 aa10.63□□□□□ -0.71
HLA-DMA-207ENST00000475627 HMGB2P26583 209 aaKnown RBP10.63□□□□□ -0.71
HLA-DMA-207ENST00000475627 TEFQ10587 303 aa10.63□□□□□ -0.71
HLA-DMA-207ENST00000475627 SEPT12Q8IYM1 358 aa10.63□□□□□ -0.71
HLA-DMA-207ENST00000475627 DDX54Q8TDD1 881 aaKnown RBP10.63□□□□□ -0.71
HLA-DMA-207ENST00000475627 PHACTR3Q96KR7 559 aa10.63□□□□□ -0.71
HLA-DMA-207ENST00000475627 IL16Q14005 1332 aa10.61□□□□□ -0.71
HLA-DMA-207ENST00000475627 BCL9O00512 1426 aa10.61□□□□□ -0.71
HLA-DMA-207ENST00000475627 ERVV-2B6SEH9 535 aa10.61□□□□□ -0.71
HLA-DMA-207ENST00000475627 KRT27Q7Z3Y8 459 aa10.61□□□□□ -0.71
HLA-DMA-207ENST00000475627 WDR63Q8IWG1 891 aa10.61□□□□□ -0.71
HLA-DMA-207ENST00000475627 CHMP4AQ9BY43 222 aa10.61□□□□□ -0.71
HLA-DMA-207ENST00000475627 MYH16Q9H6N6 1097 aa10.61□□□□□ -0.71
HLA-DMA-207ENST00000475627 BABAM1Q9NWV8 329 aa10.61□□□□□ -0.71
HLA-DMA-207ENST00000475627 HAX1O00165 279 aa10.6□□□□□ -0.71
HLA-DMA-207ENST00000475627 CABP4P57796 275 aa10.6□□□□□ -0.71
HLA-DMA-207ENST00000475627 FAM196AQ6ZSG2 479 aa10.6□□□□□ -0.71
HLA-DMA-207ENST00000475627 PIP4P2Q8N4L2 257 aa10.6□□□□□ -0.71
HLA-DMA-207ENST00000475627 RRP7AQ9Y3A4 280 aaKnown RBP10.6□□□□□ -0.71
HLA-DMA-207ENST00000475627 E9PSI1 815 aa10.59□□□□□ -0.71
HLA-DMA-207ENST00000475627 CYP27B1O15528 508 aa10.59□□□□□ -0.71
HLA-DMA-207ENST00000475627 RNMTO43148 476 aaKnown RBP10.59□□□□□ -0.71
HLA-DMA-207ENST00000475627 GNAI1P63096 354 aa10.59□□□□□ -0.71
HLA-DMA-207ENST00000475627 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
HLA-DMA-207ENST00000475627 FLIIQ13045 1269 aa10.59□□□□□ -0.71
HLA-DMA-207ENST00000475627 WWC1Q8IX03 1113 aa10.59□□□□□ -0.71
HLA-DMA-207ENST00000475627 AKT1S1Q96B36 256 aa10.59□□□□□ -0.71
HLA-DMA-207ENST00000475627 YTHDC1Q96MU7 727 aaKnown RBP10.59□□□□□ -0.71
HLA-DMA-207ENST00000475627 IFT57Q9NWB7 429 aa10.59□□□□□ -0.71
HLA-DMA-207ENST00000475627 TMOD3Q9NYL9 352 aa10.59□□□□□ -0.71
HLA-DMA-207ENST00000475627 RGS12O14924 1447 aa10.58□□□□□ -0.72
HLA-DMA-207ENST00000475627 SHANK3Q9BYB0 1731 aa10.58□□□□□ -0.72
HLA-DMA-207ENST00000475627 MRC1P22897 1456 aa10.58□□□□□ -0.72
HLA-DMA-207ENST00000475627 CEMIPQ8WUJ3 1361 aa10.58□□□□□ -0.72
HLA-DMA-207ENST00000475627 PDE4DQ08499 809 aa10.58□□□□□ -0.72
HLA-DMA-207ENST00000475627 MPRIPQ6WCQ1 1025 aa10.58□□□□□ -0.72
HLA-DMA-207ENST00000475627 TTC5Q8N0Z6 440 aa10.58□□□□□ -0.72
HLA-DMA-207ENST00000475627 ADAMTS7Q9UKP4 1686 aa10.57□□□□□ -0.72
HLA-DMA-207ENST00000475627 TRIM66O15016 1216 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms