RNA–Protein interactions for RNA: ENST00000475534.5

RRP1-204, Transcript of ribosomal RNA processing 1, humanhuman

TSL 3

Gene RRP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-204ENST00000475534 SGIP1Q9BQI5 828 aa29.75■■■□□ 2.35
RRP1-204ENST00000475534 NUDCQ9Y266 331 aa29.75■■■□□ 2.35
RRP1-204ENST00000475534 COL3A1P02461 1466 aaPredicted RBP29.74■■■□□ 2.35
RRP1-204ENST00000475534 MTHFSDQ2M296 383 aaKnown RBP29.73■■■□□ 2.35
RRP1-204ENST00000475534 QSER1Q2KHR3 1735 aa29.73■■■□□ 2.35
RRP1-204ENST00000475534 LINC00116Q8NCU8 138 aa29.72■■■□□ 2.35
RRP1-204ENST00000475534 FHDC1Q9C0D6 1143 aaPredicted RBP29.72■■■□□ 2.35
RRP1-204ENST00000475534 PHF14O94880 888 aa29.71■■■□□ 2.35
RRP1-204ENST00000475534 ITPK1Q13572 414 aa29.71■■■□□ 2.35
RRP1-204ENST00000475534 C4BP0C0L5 1744 aa29.69■■■□□ 2.34
RRP1-204ENST00000475534 KLHL34Q8N239 644 aa29.69■■■□□ 2.34
RRP1-204ENST00000475534 LGR6Q9HBX8 967 aa29.69■■■□□ 2.34
RRP1-204ENST00000475534 PTCD1O75127 700 aaKnown RBP29.68■■■□□ 2.34
RRP1-204ENST00000475534 SYT17Q9BSW7 474 aa29.68■■■□□ 2.34
RRP1-204ENST00000475534 TUBGCP6Q96RT7 1819 aa29.68■■■□□ 2.34
RRP1-204ENST00000475534 GNPATO15228 680 aa29.67■■■□□ 2.34
RRP1-204ENST00000475534 RNMTO43148 476 aaKnown RBP29.67■■■□□ 2.34
RRP1-204ENST00000475534 MSL1Q68DK7 614 aa29.67■■■□□ 2.34
RRP1-204ENST00000475534 TAF1LQ8IZX4 1826 aa29.66■■■□□ 2.34
RRP1-204ENST00000475534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.66■■■□□ 2.34
RRP1-204ENST00000475534 U2AF1L5P0DN76 240 aaPredicted RBP29.66■■■□□ 2.34
RRP1-204ENST00000475534 U2AF1Q01081 240 aaKnown RBP eCLIP29.66■■■□□ 2.34
RRP1-204ENST00000475534 GAS2L2Q8NHY3 880 aa29.66■■■□□ 2.34
RRP1-204ENST00000475534 SLC52A2Q9HAB3 445 aa29.66■■■□□ 2.34
RRP1-204ENST00000475534 SSFA2P28290 1259 aa29.64■■■□□ 2.34
RRP1-204ENST00000475534 SMIM5Q71RC9 77 aa29.64■■■□□ 2.34
RRP1-204ENST00000475534 PRKAR2BP31323 418 aa29.63■■■□□ 2.33
RRP1-204ENST00000475534 SLC4A9Q96Q91 983 aa29.63■■■□□ 2.33
RRP1-204ENST00000475534 DDX10Q13206 875 aaKnown RBP29.62■■■□□ 2.33
RRP1-204ENST00000475534 AMIGO3Q86WK7 504 aa29.62■■■□□ 2.33
RRP1-204ENST00000475534 GNAT3A8MTJ3 354 aa29.61■■■□□ 2.33
RRP1-204ENST00000475534 RTCBQ9Y3I0 505 aaKnown RBP29.61■■■□□ 2.33
RRP1-204ENST00000475534 RSPH6AQ9H0K4 717 aa29.6■■■□□ 2.33
RRP1-204ENST00000475534 MAP3K5Q99683 1374 aa29.59■■■□□ 2.33
RRP1-204ENST00000475534 SCN11AQ9UI33 1791 aa29.59■■■□□ 2.33
RRP1-204ENST00000475534 RC3H1Q5TC82 1133 aaKnown RBP29.58■■■□□ 2.33
RRP1-204ENST00000475534 FCHSD2O94868 740 aa29.57■■■□□ 2.32
RRP1-204ENST00000475534 TEFQ10587 303 aa29.57■■■□□ 2.32
RRP1-204ENST00000475534 TRAPPC3LQ5T215 181 aa29.57■■■□□ 2.32
RRP1-204ENST00000475534 PHACTR3Q96KR7 559 aa29.57■■■□□ 2.32
RRP1-204ENST00000475534 SLC39A6Q13433 755 aa29.56■■■□□ 2.32
RRP1-204ENST00000475534 CNTNAP4Q9C0A0 1308 aa29.55■■■□□ 2.32
RRP1-204ENST00000475534 NEFMP07197 916 aa29.53■■■□□ 2.32
RRP1-204ENST00000475534 ZEB1P37275 1124 aaPredicted RBP29.53■■■□□ 2.32
RRP1-204ENST00000475534 TTC5Q8N0Z6 440 aa29.53■■■□□ 2.32
RRP1-204ENST00000475534 ZNF831Q5JPB2 1677 aa29.53■■■□□ 2.32
RRP1-204ENST00000475534 UBR3Q6ZT12 1888 aa29.53■■■□□ 2.32
RRP1-204ENST00000475534 RPS6KA4O75676 772 aa29.52■■■□□ 2.32
RRP1-204ENST00000475534 CRKLP46109 303 aaKnown RBP29.52■■■□□ 2.32
RRP1-204ENST00000475534 RALBP1Q15311 655 aa29.52■■■□□ 2.32
RRP1-204ENST00000475534 IL17REQ8NFR9 667 aa29.52■■■□□ 2.32
RRP1-204ENST00000475534 MRC1P22897 1456 aa29.52■■■□□ 2.32
RRP1-204ENST00000475534 ADRA2BP18089 450 aa29.51■■■□□ 2.31
RRP1-204ENST00000475534 RFC4P35249 363 aa29.51■■■□□ 2.31
RRP1-204ENST00000475534 COL24A1Q17RW2 1714 aa29.51■■■□□ 2.31
RRP1-204ENST00000475534 RTF1Q92541 710 aaKnown RBP29.5■■■□□ 2.31
RRP1-204ENST00000475534 DNAJC10Q8IXB1 793 aa29.49■■■□□ 2.31
RRP1-204ENST00000475534 ARHGEF1Q92888 912 aaKnown RBP29.49■■■□□ 2.31
RRP1-204ENST00000475534 PELP1Q8IZL8 1130 aaKnown RBP29.48■■■□□ 2.31
RRP1-204ENST00000475534 GPR162Q16538 588 aa29.47■■■□□ 2.31
RRP1-204ENST00000475534 NLGN2Q8NFZ4 835 aa29.46■■■□□ 2.31
RRP1-204ENST00000475534 ADAMTS7Q9UKP4 1686 aa29.46■■■□□ 2.31
RRP1-204ENST00000475534 NLGN1Q8N2Q7 840 aa29.45■■■□□ 2.31
RRP1-204ENST00000475534 CCDC87Q9NVE4 849 aa29.45■■■□□ 2.31
RRP1-204ENST00000475534 COL5A3P25940 1745 aaPredicted RBP29.45■■■□□ 2.3
RRP1-204ENST00000475534 YY1P25490 414 aa29.44■■■□□ 2.3
RRP1-204ENST00000475534 CD2APQ9Y5K6 639 aa29.44■■■□□ 2.3
RRP1-204ENST00000475534 ZNF790Q6PG37 636 aa29.43■■■□□ 2.3
RRP1-204ENST00000475534 VSIG10Q8N0Z9 540 aa29.43■■■□□ 2.3
RRP1-204ENST00000475534 PNNQ9H307 717 aaKnown RBP29.43■■■□□ 2.3
RRP1-204ENST00000475534 BTBD11A6QL63 1104 aa29.42■■■□□ 2.3
RRP1-204ENST00000475534 CYP19A1P11511 503 aaPredicted RBP29.42■■■□□ 2.3
RRP1-204ENST00000475534 INTS5Q6P9B9 1019 aaKnown RBP29.42■■■□□ 2.3
RRP1-204ENST00000475534 MMP10P09238 476 aa29.41■■■□□ 2.3
RRP1-204ENST00000475534 MCM10Q7L590 875 aa29.41■■■□□ 2.3
RRP1-204ENST00000475534 VIRMAQ69YN4 1812 aaKnown RBP29.41■■■□□ 2.3
RRP1-204ENST00000475534 KCPQ6ZWJ8 1503 aa29.4■■■□□ 2.3
RRP1-204ENST00000475534 CEMIPQ8WUJ3 1361 aa29.4■■■□□ 2.3
RRP1-204ENST00000475534 TJP1Q07157 1748 aa29.4■■■□□ 2.3
RRP1-204ENST00000475534 HTATSF1O43719 755 aaKnown RBP29.39■■■□□ 2.3
RRP1-204ENST00000475534 STARD3NLO95772 234 aa29.39■■■□□ 2.3
RRP1-204ENST00000475534 ZNF496Q96IT1 587 aaPredicted RBP29.39■■■□□ 2.3
RRP1-204ENST00000475534 MYBBP1AQ9BQG0 1328 aaKnown RBP29.39■■■□□ 2.3
RRP1-204ENST00000475534 GYS1P13807 737 aa29.38■■■□□ 2.29
RRP1-204ENST00000475534 FMNL2Q96PY5 1086 aa29.38■■■□□ 2.29
RRP1-204ENST00000475534 MAPK8IP3Q9UPT6 1336 aa29.38■■■□□ 2.29
RRP1-204ENST00000475534 DCTN1Q14203 1278 aa29.37■■■□□ 2.29
RRP1-204ENST00000475534 TEX13AQ9BXU3 409 aaPredicted RBP29.37■■■□□ 2.29
RRP1-204ENST00000475534 CICQ96RK0 1608 aaPredicted RBP29.36■■■□□ 2.29
RRP1-204ENST00000475534 ZPR1O75312 459 aa29.36■■■□□ 2.29
RRP1-204ENST00000475534 SRP68Q9UHB9 627 aaKnown RBP29.36■■■□□ 2.29
RRP1-204ENST00000475534 PARP3Q9Y6F1 533 aa29.35■■■□□ 2.29
RRP1-204ENST00000475534 HEG1Q9ULI3 1381 aa29.35■■■□□ 2.29
RRP1-204ENST00000475534 CANXP27824 592 aaKnown RBP29.34■■■□□ 2.29
RRP1-204ENST00000475534 ZBTB1Q9Y2K1 713 aa29.34■■■□□ 2.29
RRP1-204ENST00000475534 SOS1Q07889 1333 aaPredicted RBP29.34■■■□□ 2.29
RRP1-204ENST00000475534 USP42Q9H9J4 1324 aaKnown RBP29.34■■■□□ 2.29
RRP1-204ENST00000475534 MYH14Q7Z406 1995 aaKnown RBP29.33■■■□□ 2.29
RRP1-204ENST00000475534 PLEKHF1Q96S99 279 aa29.33■■■□□ 2.29
RRP1-204ENST00000475534 KCNQ3O43525 872 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms