RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 FOXO3O43524 673 aa8.97□□□□□ -0.97
SDHB-205ENST00000475506 LILRA1O75019 489 aa8.97□□□□□ -0.97
SDHB-205ENST00000475506 INHAP05111 366 aa8.97□□□□□ -0.97
SDHB-205ENST00000475506 NPR3P17342 541 aa8.97□□□□□ -0.97
SDHB-205ENST00000475506 FSHRP23945 695 aa8.97□□□□□ -0.97
SDHB-205ENST00000475506 A0A1W2PRU2 124 aa8.96□□□□□ -0.98
SDHB-205ENST00000475506 RC3H1Q5TC82 1133 aaKnown RBP8.96□□□□□ -0.98
SDHB-205ENST00000475506 EHBP1Q8NDI1 1231 aa8.96□□□□□ -0.98
SDHB-205ENST00000475506 TLL2Q9Y6L7 1015 aa8.96□□□□□ -0.98
SDHB-205ENST00000475506 ITGBL1O95965 494 aaPredicted RBP8.95□□□□□ -0.98
SDHB-205ENST00000475506 KCNC4Q03721 635 aa8.95□□□□□ -0.98
SDHB-205ENST00000475506 TBCELQ5QJ74 424 aa8.95□□□□□ -0.98
SDHB-205ENST00000475506 SLC4A9Q96Q91 983 aa8.95□□□□□ -0.98
SDHB-205ENST00000475506 BACH1O14867 736 aa8.94□□□□□ -0.98
SDHB-205ENST00000475506 SIAH2O43255 324 aa8.94□□□□□ -0.98
SDHB-205ENST00000475506 MPSTP25325 297 aa8.94□□□□□ -0.98
SDHB-205ENST00000475506 ADD1P35611 737 aaKnown RBP8.94□□□□□ -0.98
SDHB-205ENST00000475506 FOXK2Q01167 660 aa8.94□□□□□ -0.98
SDHB-205ENST00000475506 CHMP7Q8WUX9 453 aaPredicted RBP8.94□□□□□ -0.98
SDHB-205ENST00000475506 EMID1Q96A84 441 aaPredicted RBP8.94□□□□□ -0.98
SDHB-205ENST00000475506 RPIAP49247 311 aa8.93□□□□□ -0.98
SDHB-205ENST00000475506 ZNF326Q5BKZ1 582 aaKnown RBP8.93□□□□□ -0.98
SDHB-205ENST00000475506 PPP1R26Q5T8A7 1209 aaPredicted RBP8.93□□□□□ -0.98
SDHB-205ENST00000475506 ZSCAN29Q8IWY8 852 aaPredicted RBP8.93□□□□□ -0.98
SDHB-205ENST00000475506 RGL4Q8IZJ4 473 aa8.93□□□□□ -0.98
SDHB-205ENST00000475506 ESF1Q9H501 851 aaKnown RBP8.93□□□□□ -0.98
SDHB-205ENST00000475506 NR3C2P08235 984 aa8.92□□□□□ -0.98
SDHB-205ENST00000475506 PPP1R18Q6NYC8 613 aa8.92□□□□□ -0.98
SDHB-205ENST00000475506 SCHIP1Q9P0W5 487 aaPredicted RBP8.92□□□□□ -0.98
SDHB-205ENST00000475506 USP3Q9Y6I4 520 aa8.92□□□□□ -0.98
SDHB-205ENST00000475506 TNFRSF10BO14763 440 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 PPP1R12BO60237 982 aaPredicted RBP8.91□□□□□ -0.98
SDHB-205ENST00000475506 FAM13AO94988 1023 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 P4HBP07237 508 aaKnown RBP8.91□□□□□ -0.98
SDHB-205ENST00000475506 TCF3P15923 654 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 VAMP1P23763 118 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 DHX9Q08211 1270 aaKnown RBP8.91□□□□□ -0.98
SDHB-205ENST00000475506 COX20Q5RI15 118 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 C16orf46Q6P387 395 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 LIAT1Q6ZQX7 453 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 TMC7Q7Z402 723 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 SLC9A9Q8IVB4 645 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 CDAN1Q8IWY9 1227 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 MPNDQ8N594 471 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 C2orf49Q9BVC5 232 aaPredicted RBP8.91□□□□□ -0.98
SDHB-205ENST00000475506 RBCK1Q9BYM8 510 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 RAB6BQ9NRW1 208 aa8.91□□□□□ -0.98
SDHB-205ENST00000475506 GNRH1P01148 92 aa8.9□□□□□ -0.98
SDHB-205ENST00000475506 COL19A1Q14993 1142 aa8.9□□□□□ -0.98
SDHB-205ENST00000475506 MTFR1Q15390 333 aa8.9□□□□□ -0.98
SDHB-205ENST00000475506 FAM26DQ5JW98 314 aa8.9□□□□□ -0.98
SDHB-205ENST00000475506 CCDC116Q8IYX3 515 aa8.9□□□□□ -0.98
SDHB-205ENST00000475506 A6NJY4 79 aa8.89□□□□□ -0.99
SDHB-205ENST00000475506 RECKO95980 971 aa8.89□□□□□ -0.99
SDHB-205ENST00000475506 ADH1CP00326 375 aa8.89□□□□□ -0.99
SDHB-205ENST00000475506 IL2RAP01589 272 aa8.89□□□□□ -0.99
SDHB-205ENST00000475506 SMTNP53814 917 aa8.89□□□□□ -0.99
SDHB-205ENST00000475506 MYT1Q01538 1121 aa8.89□□□□□ -0.99
SDHB-205ENST00000475506 POTEGQ6S5H5 508 aa8.89□□□□□ -0.99
SDHB-205ENST00000475506 CYP2U1Q7Z449 544 aa8.89□□□□□ -0.99
SDHB-205ENST00000475506 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.89□□□□□ -0.99
SDHB-205ENST00000475506 CCDC87Q9NVE4 849 aa8.89□□□□□ -0.99
SDHB-205ENST00000475506 FZD6O60353 706 aa8.88□□□□□ -0.99
SDHB-205ENST00000475506 CD2BP2O95400 341 aaKnown RBP8.88□□□□□ -0.99
SDHB-205ENST00000475506 IGHA2P01877 340 aa8.88□□□□□ -0.99
SDHB-205ENST00000475506 GGCXP38435 758 aa8.88□□□□□ -0.99
SDHB-205ENST00000475506 EAPPQ56P03 285 aaPredicted RBP8.88□□□□□ -0.99
SDHB-205ENST00000475506 STAG2Q8N3U4 1231 aa8.88□□□□□ -0.99
SDHB-205ENST00000475506 KDF1Q8NAX2 398 aaPredicted RBP8.88□□□□□ -0.99
SDHB-205ENST00000475506 VTI1AQ96AJ9 217 aa8.88□□□□□ -0.99
SDHB-205ENST00000475506 XAGE2Q96GT9 111 aa8.88□□□□□ -0.99
SDHB-205ENST00000475506 QTRT2Q9H974 415 aaKnown RBP8.88□□□□□ -0.99
SDHB-205ENST00000475506 ARHGEF10LQ9HCE6 1279 aa8.88□□□□□ -0.99
SDHB-205ENST00000475506 LRFN2Q9ULH4 789 aa8.88□□□□□ -0.99
SDHB-205ENST00000475506 IQSEC3Q9UPP2 1182 aaPredicted RBP8.88□□□□□ -0.99
SDHB-205ENST00000475506 HRH3Q9Y5N1 445 aa8.88□□□□□ -0.99
SDHB-205ENST00000475506 ZBTB39O15060 712 aa8.87□□□□□ -0.99
SDHB-205ENST00000475506 EIF1AXP47813 144 aaKnown RBP8.87□□□□□ -0.99
SDHB-205ENST00000475506 TREHO43280 583 aa8.86□□□□□ -0.99
SDHB-205ENST00000475506 NR5A1Q13285 461 aa8.86□□□□□ -0.99
SDHB-205ENST00000475506 DSC3Q14574 896 aa8.86□□□□□ -0.99
SDHB-205ENST00000475506 SH3PXD2AQ5TCZ1 1133 aa8.86□□□□□ -0.99
SDHB-205ENST00000475506 POTEAQ6S8J7 498 aa8.86□□□□□ -0.99
SDHB-205ENST00000475506 FMR1Q06787 632 aaKnown RBP eCLIP8.85□□□□□ -0.99
SDHB-205ENST00000475506 ESCO1Q5FWF5 840 aa8.85□□□□□ -0.99
SDHB-205ENST00000475506 ZNF295-AS1Q8N0V1 137 aa8.85□□□□□ -0.99
SDHB-205ENST00000475506 MRGPRX2Q96LB1 330 aa8.85□□□□□ -0.99
SDHB-205ENST00000475506 STIM2Q9P246 746 aa8.85□□□□□ -0.99
SDHB-205ENST00000475506 USP35Q9P2H5 1018 aa8.85□□□□□ -0.99
SDHB-205ENST00000475506 WNT7AO00755 349 aa8.84□□□□□ -0.99
SDHB-205ENST00000475506 NDUFB5O43674 189 aa8.84□□□□□ -0.99
SDHB-205ENST00000475506 PSMA6P60900 246 aaKnown RBP8.84□□□□□ -0.99
SDHB-205ENST00000475506 ZDHHC1Q8WTX9 485 aa8.84□□□□□ -0.99
SDHB-205ENST00000475506 CNKSR1Q969H4 720 aa8.84□□□□□ -0.99
SDHB-205ENST00000475506 HCSTQ9UBK5 93 aa8.84□□□□□ -0.99
SDHB-205ENST00000475506 BRPF3Q9ULD4 1205 aa8.84□□□□□ -0.99
SDHB-205ENST00000475506 CDK2AP1O14519 115 aa8.83□□□□□ -1
SDHB-205ENST00000475506 MRPL58Q14197 206 aaKnown RBP8.83□□□□□ -1
SDHB-205ENST00000475506 LDLRAD1Q5T700 205 aa8.83□□□□□ -1
SDHB-205ENST00000475506 ATCAYQ86WG3 371 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms