RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 MYZAPP0CAP1 466 aa16.6■□□□□ 0.25
SSPO-205ENST00000475488 TNNT1P13805 278 aa16.6■□□□□ 0.25
SSPO-205ENST00000475488 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
SSPO-205ENST00000475488 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.59■□□□□ 0.25
SSPO-205ENST00000475488 KRT32Q14532 448 aa16.59■□□□□ 0.25
SSPO-205ENST00000475488 PUF60Q9UHX1 559 aaKnown RBP16.59■□□□□ 0.25
SSPO-205ENST00000475488 BAG4O95429 457 aaKnown RBP16.59■□□□□ 0.25
SSPO-205ENST00000475488 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
SSPO-205ENST00000475488 ADAMTS2O95450 1211 aa16.59■□□□□ 0.25
SSPO-205ENST00000475488 IFFO1Q0D2I5 559 aa16.59■□□□□ 0.25
SSPO-205ENST00000475488 SMC1AQ14683 1233 aaKnown RBP16.59■□□□□ 0.25
SSPO-205ENST00000475488 MYOM3Q5VTT5 1437 aa16.59■□□□□ 0.25
SSPO-205ENST00000475488 SRGAP3O43295 1099 aa16.58■□□□□ 0.25
SSPO-205ENST00000475488 SAMM50Q9Y512 469 aa16.58■□□□□ 0.25
SSPO-205ENST00000475488 FANCD2Q9BXW9 1451 aa16.58■□□□□ 0.24
SSPO-205ENST00000475488 EXOSC9Q06265 439 aaKnown RBP16.58■□□□□ 0.24
SSPO-205ENST00000475488 LRRC45Q96CN5 670 aa16.58■□□□□ 0.24
SSPO-205ENST00000475488 IFIT1P09914 478 aaKnown RBP16.58■□□□□ 0.24
SSPO-205ENST00000475488 ARHGAP29Q52LW3 1261 aa16.58■□□□□ 0.24
SSPO-205ENST00000475488 TRMT1LQ7Z2T5 733 aaKnown RBP16.58■□□□□ 0.24
SSPO-205ENST00000475488 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
SSPO-205ENST00000475488 RGS22Q8NE09 1264 aa16.57■□□□□ 0.24
SSPO-205ENST00000475488 MYO1BO43795 1136 aa16.57■□□□□ 0.24
SSPO-205ENST00000475488 BCAR3O75815 825 aa16.57■□□□□ 0.24
SSPO-205ENST00000475488 GIMAP7Q8NHV1 300 aa16.57■□□□□ 0.24
SSPO-205ENST00000475488 SYCP3Q8IZU3 236 aa16.57■□□□□ 0.24
SSPO-205ENST00000475488 NAPBQ9H115 298 aa16.57■□□□□ 0.24
SSPO-205ENST00000475488 STAC3Q96MF2 364 aa16.56■□□□□ 0.24
SSPO-205ENST00000475488 RANBP6O60518 1105 aaKnown RBP16.56■□□□□ 0.24
SSPO-205ENST00000475488 CFAP100Q494V2 611 aa16.56■□□□□ 0.24
SSPO-205ENST00000475488 CASQ1P31415 396 aa16.56■□□□□ 0.24
SSPO-205ENST00000475488 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
SSPO-205ENST00000475488 CETN1Q12798 172 aa16.56■□□□□ 0.24
SSPO-205ENST00000475488 KLHL10Q6JEL2 608 aa16.56■□□□□ 0.24
SSPO-205ENST00000475488 ZC3H6P61129 1189 aaKnown RBP16.56■□□□□ 0.24
SSPO-205ENST00000475488 SLC5A1P13866 664 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 TCP11L2Q8N4U5 519 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 ARL1P40616 181 aaPredicted RBP16.55■□□□□ 0.24
SSPO-205ENST00000475488 LUZP1Q86V48 1076 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 BICD1Q96G01 975 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 USP8P40818 1118 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 CRACR2AQ9BSW2 395 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
SSPO-205ENST00000475488 RTEL1-TNFRSF6BF6WH68 1400 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 A0A087WZG4 1122 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 POGZQ7Z3K3 1410 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 CADPSQ9ULU8 1353 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 PTCD1O75127 700 aaKnown RBP16.55■□□□□ 0.24
SSPO-205ENST00000475488 ATF7IPQ6VMQ6 1270 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 DDX11Q96FC9 970 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 NUP62CLQ9H1M0 184 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 TAOK3Q9H2K8 898 aa16.55■□□□□ 0.24
SSPO-205ENST00000475488 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
SSPO-205ENST00000475488 MROH2BQ7Z745 1585 aa16.54■□□□□ 0.24
SSPO-205ENST00000475488 IQCA1Q86XH1 822 aa16.54■□□□□ 0.24
SSPO-205ENST00000475488 C6orf229H3BNL8 230 aa16.54■□□□□ 0.24
SSPO-205ENST00000475488 CASTP20810 708 aaKnown RBP16.54■□□□□ 0.24
SSPO-205ENST00000475488 CTCFLQ8NI51 663 aaPredicted RBP16.54■□□□□ 0.24
SSPO-205ENST00000475488 UTP14AQ9BVJ6 771 aaKnown RBP16.54■□□□□ 0.24
SSPO-205ENST00000475488 ZNF622Q969S3 477 aaKnown RBP eCLIP16.54■□□□□ 0.24
SSPO-205ENST00000475488 ZMYND15Q9H091 742 aa16.54■□□□□ 0.24
SSPO-205ENST00000475488 DNA2P51530 1060 aa16.53■□□□□ 0.24
SSPO-205ENST00000475488 CCDC196A0A1B0GTZ2 297 aa16.53■□□□□ 0.24
SSPO-205ENST00000475488 PDZRN3Q9UPQ7 1066 aa16.53■□□□□ 0.24
SSPO-205ENST00000475488 TTC21AQ8NDW8 1320 aa16.53■□□□□ 0.24
SSPO-205ENST00000475488 GNAT3A8MTJ3 354 aa16.53■□□□□ 0.24
SSPO-205ENST00000475488 ZWINTO95229 277 aa16.53■□□□□ 0.24
SSPO-205ENST00000475488 NGLY1Q96IV0 654 aa16.53■□□□□ 0.24
SSPO-205ENST00000475488 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
SSPO-205ENST00000475488 MAP3K12Q12852 859 aa16.52■□□□□ 0.24
SSPO-205ENST00000475488 MAP9Q49MG5 647 aa16.52■□□□□ 0.24
SSPO-205ENST00000475488 ZSCAN31Q96LW9 406 aaPredicted RBP16.52■□□□□ 0.24
SSPO-205ENST00000475488 NLRP5P59047 1200 aa16.52■□□□□ 0.24
SSPO-205ENST00000475488 PHAXQ9H814 394 aaKnown RBP16.52■□□□□ 0.24
SSPO-205ENST00000475488 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.24
SSPO-205ENST00000475488 CKAP2LQ8IYA6 745 aa16.52■□□□□ 0.24
SSPO-205ENST00000475488 TSR2Q969E8 191 aaKnown RBP16.52■□□□□ 0.24
SSPO-205ENST00000475488 SSRP1Q08945 709 aaKnown RBP16.52■□□□□ 0.24
SSPO-205ENST00000475488 SPTY2D1Q68D10 685 aaPredicted RBP16.52■□□□□ 0.24
SSPO-205ENST00000475488 SYNCQ9H7C4 482 aa16.52■□□□□ 0.24
SSPO-205ENST00000475488 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.23
SSPO-205ENST00000475488 RBM10P98175 930 aaKnown RBP16.52■□□□□ 0.23
SSPO-205ENST00000475488 MPNDQ8N594 471 aa16.52■□□□□ 0.23
SSPO-205ENST00000475488 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
SSPO-205ENST00000475488 STXBP4Q6ZWJ1 553 aa16.51■□□□□ 0.23
SSPO-205ENST00000475488 ADAMTS8Q9UP79 889 aa16.51■□□□□ 0.23
SSPO-205ENST00000475488 RAB3IL1Q8TBN0 382 aa16.51■□□□□ 0.23
SSPO-205ENST00000475488 CABP5Q9NP86 173 aa16.51■□□□□ 0.23
SSPO-205ENST00000475488 PRC1O43663 620 aa16.51■□□□□ 0.23
SSPO-205ENST00000475488 OTUD6BQ8N6M0 293 aa16.51■□□□□ 0.23
SSPO-205ENST00000475488 CATIPQ7Z7H3 387 aa16.51■□□□□ 0.23
SSPO-205ENST00000475488 CABP1Q9NZU7 370 aa16.51■□□□□ 0.23
SSPO-205ENST00000475488 SHTN1A0MZ66 631 aa16.5■□□□□ 0.23
SSPO-205ENST00000475488 K7ELQ4 463 aaPredicted RBP16.5■□□□□ 0.23
SSPO-205ENST00000475488 ST5P78524 1137 aa16.5■□□□□ 0.23
SSPO-205ENST00000475488 TDRD12Q587J7 1177 aaKnown RBP16.5■□□□□ 0.23
SSPO-205ENST00000475488 SREK1Q8WXA9 508 aaKnown RBP16.5■□□□□ 0.23
SSPO-205ENST00000475488 CALML4Q96GE6 196 aa16.5■□□□□ 0.23
SSPO-205ENST00000475488 SLC12A7Q9Y666 1083 aa16.5■□□□□ 0.23
SSPO-205ENST00000475488 KIF20AO95235 890 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms