RNA–Protein interactions for RNA: ENST00000475460.6

COMMD3-BMI1-203, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-203ENST00000475460 CRYBG1Q9Y4K1 1723 aa10.75□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 PLSCR1O15162 318 aa10.75□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 HOXB1P14653 301 aaPredicted RBP10.75□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 FOSBP53539 338 aa10.75□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 CDHR5Q9HBB8 845 aa10.75□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 AATKQ6ZMQ8 1374 aa10.75□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 ITSN1Q15811 1721 aa10.75□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 ARHGEF28Q8N1W1 1705 aaKnown RBP10.75□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 COL5A2P05997 1499 aaPredicted RBP10.74□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 CSB-PGBD3P0DP91 1061 aa10.74□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 TNS1Q9HBL0 1735 aaKnown RBP10.74□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 OVOS2A0A0G2JMS6 1433 aa10.74□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 OVOS2A0A0J9YW53 1432 aa10.74□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 OVOS2Q6IE36 1432 aa10.74□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 NRKQ7Z2Y5 1582 aa10.73□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 PHRF1Q9P1Y6 1649 aaKnown RBP10.73□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 KCNH5Q8NCM2 988 aa10.73□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 EPAS1Q99814 870 aa10.73□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 CDCA7Q9BWT1 371 aaPredicted RBP10.73□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 EVC2Q86UK5 1308 aa10.73□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 USP6P35125 1406 aa10.73□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 TSR1Q2NL82 804 aaKnown RBP10.72□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 LHX6Q9UPM6 363 aa10.72□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 AXIN2Q9Y2T1 843 aa10.72□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 TYW1BQ6NUM6 668 aa10.71□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 PTF1AQ7RTS3 328 aa10.71□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 ARHGEF25Q86VW2 580 aa10.71□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 WDR17Q8IZU2 1322 aa10.71□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 MARCH10Q8NA82 808 aaPredicted RBP10.71□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 NINLQ9Y2I6 1382 aa10.71□□□□□ -0.69
COMMD3-BMI1-203ENST00000475460 TOPAZ1Q8N9V7 1692 aa10.7□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 LMO7Q8WWI1 1683 aa10.7□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 EXOC5O00471 708 aa10.7□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 ZBTB7AO95365 584 aa10.7□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 FECHP22830 423 aa10.7□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 ZNF454Q8N9F8 522 aa10.7□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 L3MBTL2Q969R5 705 aa10.7□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 CARD10Q9BWT7 1032 aa10.7□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 STK32BQ9NY57 414 aa10.7□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 TTC21BQ7Z4L5 1316 aa10.69□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 ST18O60284 1047 aa10.69□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 PTGDRQ13258 359 aa10.69□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 TTC21AQ8NDW8 1320 aa10.68□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 MAP3K7O43318 606 aa10.68□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 TXNRD1Q16881 649 aa10.68□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 ADAM33Q9BZ11 813 aa10.68□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 PDGFDQ9GZP0 370 aaPredicted RBP10.68□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 CPSF1Q10570 1443 aaKnown RBP10.67□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 FCHSD2O94868 740 aa10.67□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 FAM163AQ96GL9 167 aaPredicted RBP10.67□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 SLIT3O75094 1523 aa10.67□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 NUP188Q5SRE5 1749 aa10.67□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 KIAA1210Q9ULL0 1709 aa10.67□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 BCL9O00512 1426 aa10.67□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 ROCK2O75116 1388 aaKnown RBP10.66□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 NEUROD1Q13562 356 aa10.66□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 SLC15A2Q16348 729 aa10.66□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 ZDHHC16Q969W1 377 aa10.66□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 RREB1Q92766 1687 aa10.66□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 KTN1Q86UP2 1357 aaKnown RBP10.65□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 CCDC7Q96M83 1385 aa10.65□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 PARP4Q9UKK3 1724 aaKnown RBP10.65□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 GNPATO15228 680 aa10.65□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 EMP3P54852 163 aa10.65□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.65□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 SIN3AQ96ST3 1273 aa10.65□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 NLRP2Q9NX02 1062 aa10.65□□□□□ -0.7
COMMD3-BMI1-203ENST00000475460 HIC1Q14526 733 aa10.64□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 PPP4R3BQ5MIZ7 849 aa10.64□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 ACSBG1Q96GR2 724 aa10.64□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 MTFR1LQ9H019 292 aa10.64□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 IL2RBP14784 551 aa10.63□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 BRPF1P55201 1214 aaPredicted RBP10.63□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 C6orf132Q5T0Z8 1188 aa10.63□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 KRI1Q8N9T8 703 aaKnown RBP10.63□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 TMC1Q8TDI8 760 aa10.63□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 SYT17Q9BSW7 474 aa10.63□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 FHDC1Q9C0D6 1143 aaPredicted RBP10.63□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 LRRC37A3O60309 1634 aa10.62□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 ERBB3P21860 1342 aa10.62□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 PEAK1Q9H792 1746 aa10.62□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 AK7Q96M32 723 aa10.62□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 QRICH2Q9H0J4 1663 aa10.61□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 HDGFL2Q7Z4V5 671 aaPredicted RBP10.61□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 NME9Q86XW9 330 aa10.61□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 PIK3C2AO00443 1686 aa10.6□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 MAP2K5Q13163 448 aa10.6□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 ZNF784Q8NCA9 323 aaPredicted RBP10.6□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 ANKRD24Q8TF21 1146 aa10.6□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 CCDC102AQ96A19 550 aa10.6□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 MARVELD3Q96A59 401 aa10.6□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 ARXQ96QS3 562 aa10.6□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 USP31Q70CQ4 1352 aa10.6□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 TNS2Q63HR2 1409 aa10.59□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 IRF6O14896 467 aa10.59□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 TRIM66O15016 1216 aa10.59□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 CARD11Q9BXL7 1154 aa10.59□□□□□ -0.71
COMMD3-BMI1-203ENST00000475460 SLC12A5Q9H2X9 1139 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms