RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 LINC00116Q8NCU8 138 aa15.45■□□□□ 0.06
GPM6B-208ENST00000475307 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
GPM6B-208ENST00000475307 PHF14O94880 888 aa15.44■□□□□ 0.06
GPM6B-208ENST00000475307 ITPK1Q13572 414 aa15.44■□□□□ 0.06
GPM6B-208ENST00000475307 AKAP4Q5JQC9 854 aa15.44■□□□□ 0.06
GPM6B-208ENST00000475307 CFAP53Q96M91 514 aa15.44■□□□□ 0.06
GPM6B-208ENST00000475307 C4BP0C0L5 1744 aa15.43■□□□□ 0.06
GPM6B-208ENST00000475307 MSL1Q68DK7 614 aa15.43■□□□□ 0.06
GPM6B-208ENST00000475307 NFATC2IPQ8NCF5 419 aa15.43■□□□□ 0.06
GPM6B-208ENST00000475307 TUBGCP6Q96RT7 1819 aa15.43■□□□□ 0.06
GPM6B-208ENST00000475307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.42■□□□□ 0.06
GPM6B-208ENST00000475307 MTHFSDQ2M296 383 aaKnown RBP15.42■□□□□ 0.06
GPM6B-208ENST00000475307 COL3A1P02461 1466 aaPredicted RBP15.41■□□□□ 0.06
GPM6B-208ENST00000475307 GNPATO15228 680 aa15.41■□□□□ 0.06
GPM6B-208ENST00000475307 SMIM5Q71RC9 77 aa15.41■□□□□ 0.06
GPM6B-208ENST00000475307 AMIGO3Q86WK7 504 aa15.41■□□□□ 0.06
GPM6B-208ENST00000475307 TAF1LQ8IZX4 1826 aa15.4■□□□□ 0.06
GPM6B-208ENST00000475307 MAP3K5Q99683 1374 aa15.4■□□□□ 0.06
GPM6B-208ENST00000475307 PTCD1O75127 700 aaKnown RBP15.4■□□□□ 0.06
GPM6B-208ENST00000475307 SSFA2P28290 1259 aa15.4■□□□□ 0.06
GPM6B-208ENST00000475307 PPP2R1AP30153 589 aa15.4■□□□□ 0.06
GPM6B-208ENST00000475307 SLC4A9Q96Q91 983 aa15.4■□□□□ 0.06
GPM6B-208ENST00000475307 LGR6Q9HBX8 967 aa15.4■□□□□ 0.06
GPM6B-208ENST00000475307 RNMTO43148 476 aaKnown RBP15.39■□□□□ 0.05
GPM6B-208ENST00000475307 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
GPM6B-208ENST00000475307 SLC52A2Q9HAB3 445 aa15.38■□□□□ 0.05
GPM6B-208ENST00000475307 RTCBQ9Y3I0 505 aaKnown RBP15.38■□□□□ 0.05
GPM6B-208ENST00000475307 YY1P25490 414 aa15.37■□□□□ 0.05
GPM6B-208ENST00000475307 GAS2L2Q8NHY3 880 aa15.37■□□□□ 0.05
GPM6B-208ENST00000475307 TRAPPC3LQ5T215 181 aa15.36■□□□□ 0.05
GPM6B-208ENST00000475307 RC3H1Q5TC82 1133 aaKnown RBP15.36■□□□□ 0.05
GPM6B-208ENST00000475307 COL24A1Q17RW2 1714 aa15.36■□□□□ 0.05
GPM6B-208ENST00000475307 CNTNAP4Q9C0A0 1308 aa15.36■□□□□ 0.05
GPM6B-208ENST00000475307 U2AF1L5P0DN76 240 aaPredicted RBP15.35■□□□□ 0.05
GPM6B-208ENST00000475307 PRKAR2BP31323 418 aa15.35■□□□□ 0.05
GPM6B-208ENST00000475307 U2AF1Q01081 240 aaKnown RBP eCLIP15.35■□□□□ 0.05
GPM6B-208ENST00000475307 GPR162Q16538 588 aa15.35■□□□□ 0.05
GPM6B-208ENST00000475307 PELP1Q8IZL8 1130 aaKnown RBP15.35■□□□□ 0.05
GPM6B-208ENST00000475307 NLGN2Q8NFZ4 835 aa15.35■□□□□ 0.05
GPM6B-208ENST00000475307 GNAT3A8MTJ3 354 aa15.34■□□□□ 0.05
GPM6B-208ENST00000475307 SLC39A6Q13433 755 aa15.34■□□□□ 0.05
GPM6B-208ENST00000475307 SCN11AQ9UI33 1791 aa15.34■□□□□ 0.05
GPM6B-208ENST00000475307 UBR3Q6ZT12 1888 aa15.33■□□□□ 0.05
GPM6B-208ENST00000475307 ZNF831Q5JPB2 1677 aa15.33■□□□□ 0.04
GPM6B-208ENST00000475307 RPS6KA4O75676 772 aa15.33■□□□□ 0.04
GPM6B-208ENST00000475307 ADRA2BP18089 450 aa15.33■□□□□ 0.04
GPM6B-208ENST00000475307 RSPH6AQ9H0K4 717 aa15.33■□□□□ 0.04
GPM6B-208ENST00000475307 MRC1P22897 1456 aa15.33■□□□□ 0.04
GPM6B-208ENST00000475307 RFC4P35249 363 aa15.32■□□□□ 0.04
GPM6B-208ENST00000475307 CRKLP46109 303 aaKnown RBP15.32■□□□□ 0.04
GPM6B-208ENST00000475307 TEFQ10587 303 aa15.32■□□□□ 0.04
GPM6B-208ENST00000475307 DNAJC10Q8IXB1 793 aa15.32■□□□□ 0.04
GPM6B-208ENST00000475307 ARHGEF1Q92888 912 aaKnown RBP15.32■□□□□ 0.04
GPM6B-208ENST00000475307 PHACTR3Q96KR7 559 aa15.32■□□□□ 0.04
GPM6B-208ENST00000475307 CD2APQ9Y5K6 639 aa15.32■□□□□ 0.04
GPM6B-208ENST00000475307 TTC5Q8N0Z6 440 aa15.31■□□□□ 0.04
GPM6B-208ENST00000475307 IL17REQ8NFR9 667 aa15.31■□□□□ 0.04
GPM6B-208ENST00000475307 FCHSD2O94868 740 aa15.3■□□□□ 0.04
GPM6B-208ENST00000475307 NLGN1Q8N2Q7 840 aa15.3■□□□□ 0.04
GPM6B-208ENST00000475307 MMP10P09238 476 aa15.29■□□□□ 0.04
GPM6B-208ENST00000475307 COL5A3P25940 1745 aaPredicted RBP15.29■□□□□ 0.04
GPM6B-208ENST00000475307 ADAMTS7Q9UKP4 1686 aa15.28■□□□□ 0.04
GPM6B-208ENST00000475307 DDX10Q13206 875 aaKnown RBP15.28■□□□□ 0.04
GPM6B-208ENST00000475307 INTS5Q6P9B9 1019 aaKnown RBP15.28■□□□□ 0.04
GPM6B-208ENST00000475307 CCDC87Q9NVE4 849 aa15.28■□□□□ 0.04
GPM6B-208ENST00000475307 TJP1Q07157 1748 aa15.27■□□□□ 0.04
GPM6B-208ENST00000475307 NEFMP07197 916 aa15.27■□□□□ 0.04
GPM6B-208ENST00000475307 CYP19A1P11511 503 aaPredicted RBP15.27■□□□□ 0.04
GPM6B-208ENST00000475307 GYS1P13807 737 aa15.27■□□□□ 0.04
GPM6B-208ENST00000475307 VSIG10Q8N0Z9 540 aa15.27■□□□□ 0.04
GPM6B-208ENST00000475307 RTF1Q92541 710 aaKnown RBP15.27■□□□□ 0.04
GPM6B-208ENST00000475307 KCPQ6ZWJ8 1503 aa15.27■□□□□ 0.03
GPM6B-208ENST00000475307 ZNF790Q6PG37 636 aa15.26■□□□□ 0.03
GPM6B-208ENST00000475307 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
GPM6B-208ENST00000475307 BTBD11A6QL63 1104 aa15.25■□□□□ 0.03
GPM6B-208ENST00000475307 GRIN3BO60391 1043 aa15.25■□□□□ 0.03
GPM6B-208ENST00000475307 YBX3P16989 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
GPM6B-208ENST00000475307 RALBP1Q15311 655 aa15.25■□□□□ 0.03
GPM6B-208ENST00000475307 ZNF496Q96IT1 587 aaPredicted RBP15.25■□□□□ 0.03
GPM6B-208ENST00000475307 SRP68Q9UHB9 627 aaKnown RBP15.25■□□□□ 0.03
GPM6B-208ENST00000475307 CEMIPQ8WUJ3 1361 aa15.24■□□□□ 0.03
GPM6B-208ENST00000475307 SOS1Q07889 1333 aaPredicted RBP15.24■□□□□ 0.03
GPM6B-208ENST00000475307 USP42Q9H9J4 1324 aaKnown RBP15.24■□□□□ 0.03
GPM6B-208ENST00000475307 ZPR1O75312 459 aa15.24■□□□□ 0.03
GPM6B-208ENST00000475307 STARD3NLO95772 234 aa15.24■□□□□ 0.03
GPM6B-208ENST00000475307 MCM10Q7L590 875 aa15.24■□□□□ 0.03
GPM6B-208ENST00000475307 ZBTB1Q9Y2K1 713 aa15.24■□□□□ 0.03
GPM6B-208ENST00000475307 PARP3Q9Y6F1 533 aa15.24■□□□□ 0.03
GPM6B-208ENST00000475307 CANXP27824 592 aaKnown RBP15.23■□□□□ 0.03
GPM6B-208ENST00000475307 FKBP8Q14318 412 aa15.23■□□□□ 0.03
GPM6B-208ENST00000475307 FMNL2Q96PY5 1086 aa15.23■□□□□ 0.03
GPM6B-208ENST00000475307 TEX13AQ9BXU3 409 aaPredicted RBP15.23■□□□□ 0.03
GPM6B-208ENST00000475307 WWC3Q9ULE0 1092 aa15.23■□□□□ 0.03
GPM6B-208ENST00000475307 HEG1Q9ULI3 1381 aa15.23■□□□□ 0.03
GPM6B-208ENST00000475307 HTATSF1O43719 755 aaKnown RBP15.22■□□□□ 0.03
GPM6B-208ENST00000475307 DCTN1Q14203 1278 aa15.22■□□□□ 0.03
GPM6B-208ENST00000475307 USPL1Q5W0Q7 1092 aa15.22■□□□□ 0.03
GPM6B-208ENST00000475307 PNNQ9H307 717 aaKnown RBP15.22■□□□□ 0.03
GPM6B-208ENST00000475307 VIRMAQ69YN4 1812 aaKnown RBP15.22■□□□□ 0.03
GPM6B-208ENST00000475307 MYH14Q7Z406 1995 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms