RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 XPCQ01831 940 aaPredicted RBP12.65□□□□□ -0.38
ITGA6-210ENST00000475302 NEUROD2Q15784 382 aa12.65□□□□□ -0.38
ITGA6-210ENST00000475302 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
ITGA6-210ENST00000475302 ARHGEF25Q86VW2 580 aa12.65□□□□□ -0.38
ITGA6-210ENST00000475302 KCNH5Q8NCM2 988 aa12.65□□□□□ -0.38
ITGA6-210ENST00000475302 IP6K1Q92551 441 aa12.65□□□□□ -0.38
ITGA6-210ENST00000475302 ZSWIM6Q9HCJ5 1215 aa12.65□□□□□ -0.38
ITGA6-210ENST00000475302 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
ITGA6-210ENST00000475302 LTN1O94822 1766 aa12.64□□□□□ -0.39
ITGA6-210ENST00000475302 IRX6P78412 446 aaPredicted RBP12.64□□□□□ -0.39
ITGA6-210ENST00000475302 BRINP3Q76B58 766 aa12.64□□□□□ -0.39
ITGA6-210ENST00000475302 EYA1Q99502 592 aa12.64□□□□□ -0.39
ITGA6-210ENST00000475302 CRYBG1Q9Y4K1 1723 aa12.64□□□□□ -0.39
ITGA6-210ENST00000475302 NCAPD2Q15021 1401 aa12.63□□□□□ -0.39
ITGA6-210ENST00000475302 LTBP4Q8N2S1 1624 aa12.63□□□□□ -0.39
ITGA6-210ENST00000475302 POTEB3A0JP26 581 aa12.63□□□□□ -0.39
ITGA6-210ENST00000475302 GCP02774 474 aa12.63□□□□□ -0.39
ITGA6-210ENST00000475302 AMPHP49418 695 aa12.63□□□□□ -0.39
ITGA6-210ENST00000475302 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
ITGA6-210ENST00000475302 POTEBQ6S5H4 581 aa12.63□□□□□ -0.39
ITGA6-210ENST00000475302 DDX17Q92841 729 aaKnown RBP12.63□□□□□ -0.39
ITGA6-210ENST00000475302 SOS2Q07890 1332 aaPredicted RBP12.62□□□□□ -0.39
ITGA6-210ENST00000475302 NPHP3Q7Z494 1330 aa12.62□□□□□ -0.39
ITGA6-210ENST00000475302 FAM205CA6NFA0 338 aa12.62□□□□□ -0.39
ITGA6-210ENST00000475302 ZNF853P0CG23 659 aa12.62□□□□□ -0.39
ITGA6-210ENST00000475302 PDE4AP27815 886 aa12.62□□□□□ -0.39
ITGA6-210ENST00000475302 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
ITGA6-210ENST00000475302 SLAIN2Q9P270 581 aa12.62□□□□□ -0.39
ITGA6-210ENST00000475302 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
ITGA6-210ENST00000475302 SLC34A2O95436 690 aa12.61□□□□□ -0.39
ITGA6-210ENST00000475302 PPP1R15BQ5SWA1 713 aa12.61□□□□□ -0.39
ITGA6-210ENST00000475302 TNS3Q68CZ2 1445 aa12.61□□□□□ -0.39
ITGA6-210ENST00000475302 DLG5Q8TDM6 1919 aa12.6□□□□□ -0.39
ITGA6-210ENST00000475302 PCDHGA4Q9Y5G9 962 aa12.6□□□□□ -0.39
ITGA6-210ENST00000475302 COL18A1P39060 1754 aa12.6□□□□□ -0.39
ITGA6-210ENST00000475302 FANCIQ9NVI1 1328 aa12.6□□□□□ -0.39
ITGA6-210ENST00000475302 CAMTA1Q9Y6Y1 1673 aa12.59□□□□□ -0.39
ITGA6-210ENST00000475302 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
ITGA6-210ENST00000475302 HS3ST6Q96QI5 342 aa12.59□□□□□ -0.39
ITGA6-210ENST00000475302 MYH16Q9H6N6 1097 aa12.59□□□□□ -0.39
ITGA6-210ENST00000475302 PPP4R2Q9NY27 417 aa12.59□□□□□ -0.39
ITGA6-210ENST00000475302 NHSL1Q5SYE7 1610 aa12.59□□□□□ -0.39
ITGA6-210ENST00000475302 LMO7Q8WWI1 1683 aa12.58□□□□□ -0.4
ITGA6-210ENST00000475302 CT47B1P0C2W7 299 aaPredicted RBP12.57□□□□□ -0.4
ITGA6-210ENST00000475302 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
ITGA6-210ENST00000475302 NBPF6Q5VWK0 638 aa12.57□□□□□ -0.4
ITGA6-210ENST00000475302 DDX27Q96GQ7 796 aaKnown RBP12.57□□□□□ -0.4
ITGA6-210ENST00000475302 NBPF4Q96M43 638 aa12.57□□□□□ -0.4
ITGA6-210ENST00000475302 AXIN2Q9Y2T1 843 aa12.57□□□□□ -0.4
ITGA6-210ENST00000475302 ABCC6O95255 1503 aa12.57□□□□□ -0.4
ITGA6-210ENST00000475302 CPDO75976 1380 aa12.56□□□□□ -0.4
ITGA6-210ENST00000475302 PLIN1O60240 522 aa12.56□□□□□ -0.4
ITGA6-210ENST00000475302 BCAR3O75815 825 aa12.56□□□□□ -0.4
ITGA6-210ENST00000475302 NUDT7P0C024 238 aa12.56□□□□□ -0.4
ITGA6-210ENST00000475302 RARSP54136 660 aaKnown RBP12.56□□□□□ -0.4
ITGA6-210ENST00000475302 MFSD10Q14728 455 aa12.56□□□□□ -0.4
ITGA6-210ENST00000475302 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
ITGA6-210ENST00000475302 TSR2Q969E8 191 aaKnown RBP12.56□□□□□ -0.4
ITGA6-210ENST00000475302 THUMPD2Q9BTF0 503 aaKnown RBP12.56□□□□□ -0.4
ITGA6-210ENST00000475302 ERBB3P21860 1342 aa12.56□□□□□ -0.4
ITGA6-210ENST00000475302 CRB1P82279 1406 aa12.55□□□□□ -0.4
ITGA6-210ENST00000475302 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
ITGA6-210ENST00000475302 NEFMP07197 916 aa12.55□□□□□ -0.4
ITGA6-210ENST00000475302 EXOSC9Q06265 439 aaKnown RBP12.55□□□□□ -0.4
ITGA6-210ENST00000475302 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
ITGA6-210ENST00000475302 C20orf194Q5TEA3 1177 aa12.55□□□□□ -0.4
ITGA6-210ENST00000475302 PTCD2Q8WV60 388 aaKnown RBP12.55□□□□□ -0.4
ITGA6-210ENST00000475302 IFT57Q9NWB7 429 aa12.55□□□□□ -0.4
ITGA6-210ENST00000475302 RGPD2P0DJD1 1756 aa12.54□□□□□ -0.4
ITGA6-210ENST00000475302 EXOC6Q8TAG9 804 aa12.54□□□□□ -0.4
ITGA6-210ENST00000475302 CHL1O00533 1208 aa12.53□□□□□ -0.4
ITGA6-210ENST00000475302 HTATSF1O43719 755 aaKnown RBP12.53□□□□□ -0.4
ITGA6-210ENST00000475302 CALD1Q05682 793 aaKnown RBP12.53□□□□□ -0.4
ITGA6-210ENST00000475302 VARS2Q5ST30 1063 aaKnown RBP12.53□□□□□ -0.4
ITGA6-210ENST00000475302 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
ITGA6-210ENST00000475302 LRRC37A3O60309 1634 aa12.52□□□□□ -0.4
ITGA6-210ENST00000475302 RGPD5Q99666 1765 aa12.52□□□□□ -0.41
ITGA6-210ENST00000475302 GNAI1P63096 354 aa12.52□□□□□ -0.41
ITGA6-210ENST00000475302 DCTN1Q14203 1278 aa12.52□□□□□ -0.41
ITGA6-210ENST00000475302 LMOD2Q6P5Q4 547 aa12.52□□□□□ -0.41
ITGA6-210ENST00000475302 CABLES1Q8TDN4 633 aa12.52□□□□□ -0.41
ITGA6-210ENST00000475302 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.41
ITGA6-210ENST00000475302 MBIPQ9NS73 344 aa12.52□□□□□ -0.41
ITGA6-210ENST00000475302 FAM208AQ9UK61 1670 aaKnown RBP12.51□□□□□ -0.41
ITGA6-210ENST00000475302 VAMP4O75379 141 aa12.51□□□□□ -0.41
ITGA6-210ENST00000475302 BRPF1P55201 1214 aaPredicted RBP12.51□□□□□ -0.41
ITGA6-210ENST00000475302 GAS2L2Q8NHY3 880 aa12.51□□□□□ -0.41
ITGA6-210ENST00000475302 ANKRD24Q8TF21 1146 aa12.51□□□□□ -0.41
ITGA6-210ENST00000475302 LRRC59Q96AG4 307 aaKnown RBP12.51□□□□□ -0.41
ITGA6-210ENST00000475302 CRBNQ96SW2 442 aa12.51□□□□□ -0.41
ITGA6-210ENST00000475302 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
ITGA6-210ENST00000475302 ABCA3Q99758 1704 aa12.51□□□□□ -0.41
ITGA6-210ENST00000475302 ZC3H6P61129 1189 aaKnown RBP12.5□□□□□ -0.41
ITGA6-210ENST00000475302 PDE3AQ14432 1141 aa12.5□□□□□ -0.41
ITGA6-210ENST00000475302 OXER1Q8TDS5 423 aa12.5□□□□□ -0.41
ITGA6-210ENST00000475302 AHDC1Q5TGY3 1603 aaPredicted RBP12.5□□□□□ -0.41
ITGA6-210ENST00000475302 B4GALNT3Q6L9W6 998 aa12.49□□□□□ -0.41
ITGA6-210ENST00000475302 MCM10Q7L590 875 aa12.49□□□□□ -0.41
ITGA6-210ENST00000475302 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
ITGA6-210ENST00000475302 IL17REQ8NFR9 667 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms