RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 MLH3Q9UHC1 1453 aa16.64■□□□□ 0.25
SEMA4D-217ENST00000475255 HMMRO75330 724 aa16.64■□□□□ 0.25
SEMA4D-217ENST00000475255 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
SEMA4D-217ENST00000475255 CPA1P15085 419 aa16.64■□□□□ 0.25
SEMA4D-217ENST00000475255 SASS6Q6UVJ0 657 aa16.64■□□□□ 0.25
SEMA4D-217ENST00000475255 NUTM1Q86Y26 1132 aa16.64■□□□□ 0.25
SEMA4D-217ENST00000475255 CNPY2Q9Y2B0 182 aa16.64■□□□□ 0.25
SEMA4D-217ENST00000475255 MX1P20591 662 aa16.64■□□□□ 0.25
SEMA4D-217ENST00000475255 DDX54Q8TDD1 881 aaKnown RBP16.64■□□□□ 0.25
SEMA4D-217ENST00000475255 YEATS2Q9ULM3 1422 aa16.64■□□□□ 0.25
SEMA4D-217ENST00000475255 WASLO00401 505 aaPredicted RBP16.63■□□□□ 0.25
SEMA4D-217ENST00000475255 CHMLP26374 656 aa16.63■□□□□ 0.25
SEMA4D-217ENST00000475255 TSPYL4Q9UJ04 414 aa16.63■□□□□ 0.25
SEMA4D-217ENST00000475255 CDC42BPGQ6DT37 1551 aa16.63■□□□□ 0.25
SEMA4D-217ENST00000475255 KIAA2012Q0VF49 1180 aa16.63■□□□□ 0.25
SEMA4D-217ENST00000475255 CSPP1Q1MSJ5 1256 aa16.62■□□□□ 0.25
SEMA4D-217ENST00000475255 BCL11BQ9C0K0 894 aaPredicted RBP16.62■□□□□ 0.25
SEMA4D-217ENST00000475255 TCHHQ07283 1943 aa16.62■□□□□ 0.25
SEMA4D-217ENST00000475255 CPS1P31327 1500 aa16.62■□□□□ 0.25
SEMA4D-217ENST00000475255 FIBPO43427 364 aa16.61■□□□□ 0.25
SEMA4D-217ENST00000475255 TERF1P54274 439 aa16.61■□□□□ 0.25
SEMA4D-217ENST00000475255 LRRCC1Q9C099 1032 aa16.61■□□□□ 0.25
SEMA4D-217ENST00000475255 SRCIN1Q9C0H9 1055 aa16.61■□□□□ 0.25
SEMA4D-217ENST00000475255 FKBP5Q13451 457 aaPredicted RBP16.61■□□□□ 0.25
SEMA4D-217ENST00000475255 ALKQ9UM73 1620 aa16.61■□□□□ 0.25
SEMA4D-217ENST00000475255 GNAI2P04899 355 aa16.61■□□□□ 0.25
SEMA4D-217ENST00000475255 MCCP23508 829 aa16.61■□□□□ 0.25
SEMA4D-217ENST00000475255 CUL4AQ13619 759 aa16.61■□□□□ 0.25
SEMA4D-217ENST00000475255 DYNC1I1O14576 645 aa16.6■□□□□ 0.25
SEMA4D-217ENST00000475255 ADCY5O95622 1261 aa16.6■□□□□ 0.25
SEMA4D-217ENST00000475255 CHMP3Q9Y3E7 222 aa16.6■□□□□ 0.25
SEMA4D-217ENST00000475255 PRDM4Q9UKN5 801 aa16.6■□□□□ 0.25
SEMA4D-217ENST00000475255 LRRFIP2Q9Y608 721 aaKnown RBP16.6■□□□□ 0.25
SEMA4D-217ENST00000475255 KIF24Q5T7B8 1368 aa16.59■□□□□ 0.25
SEMA4D-217ENST00000475255 PTPRCP08575 1304 aa16.59■□□□□ 0.25
SEMA4D-217ENST00000475255 GIMAP6Q6P9H5 292 aa16.59■□□□□ 0.25
SEMA4D-217ENST00000475255 CDK12Q9NYV4 1490 aaPredicted RBP16.58■□□□□ 0.24
SEMA4D-217ENST00000475255 MTHFSDQ2M296 383 aaKnown RBP16.58■□□□□ 0.24
SEMA4D-217ENST00000475255 SPC24Q8NBT2 197 aa16.58■□□□□ 0.24
SEMA4D-217ENST00000475255 SYAP1Q96A49 352 aaPredicted RBP16.58■□□□□ 0.24
SEMA4D-217ENST00000475255 OSBPL3Q9H4L5 887 aa16.58■□□□□ 0.24
SEMA4D-217ENST00000475255 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
SEMA4D-217ENST00000475255 MCM5P33992 734 aa16.57■□□□□ 0.24
SEMA4D-217ENST00000475255 EDC4Q6P2E9 1401 aaKnown RBP16.57■□□□□ 0.24
SEMA4D-217ENST00000475255 REREQ9P2R6 1566 aa16.57■□□□□ 0.24
SEMA4D-217ENST00000475255 NOLC1Q14978 699 aaKnown RBP eCLIP16.57■□□□□ 0.24
SEMA4D-217ENST00000475255 CBX1P83916 185 aa16.56■□□□□ 0.24
SEMA4D-217ENST00000475255 PRR36Q9H6K5 1346 aa16.56■□□□□ 0.24
SEMA4D-217ENST00000475255 RASEFQ8IZ41 740 aa16.56■□□□□ 0.24
SEMA4D-217ENST00000475255 RTF1Q92541 710 aaKnown RBP16.56■□□□□ 0.24
SEMA4D-217ENST00000475255 SPG7Q9UQ90 795 aa16.56■□□□□ 0.24
SEMA4D-217ENST00000475255 TMEM131LA2VDJ0 1609 aa16.56■□□□□ 0.24
SEMA4D-217ENST00000475255 A0A0U1RQG5 324 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-217ENST00000475255 ZNF710Q8N1W2 664 aa16.56■□□□□ 0.24
SEMA4D-217ENST00000475255 MAP7D2Q96T17 732 aa16.56■□□□□ 0.24
SEMA4D-217ENST00000475255 MCM2P49736 904 aa16.55■□□□□ 0.24
SEMA4D-217ENST00000475255 CLTCQ00610 1675 aaKnown RBP16.55■□□□□ 0.24
SEMA4D-217ENST00000475255 SALL3Q9BXA9 1300 aa16.55■□□□□ 0.24
SEMA4D-217ENST00000475255 CPSF1Q10570 1443 aaKnown RBP16.55■□□□□ 0.24
SEMA4D-217ENST00000475255 LARGE1O95461 756 aa16.55■□□□□ 0.24
SEMA4D-217ENST00000475255 CCT4P50991 539 aaKnown RBP16.55■□□□□ 0.24
SEMA4D-217ENST00000475255 FLIIQ13045 1269 aa16.55■□□□□ 0.24
SEMA4D-217ENST00000475255 METP08581 1390 aa16.55■□□□□ 0.24
SEMA4D-217ENST00000475255 ATP7BP35670 1465 aa16.55■□□□□ 0.24
SEMA4D-217ENST00000475255 AP5Z1O43299 807 aa16.54■□□□□ 0.24
SEMA4D-217ENST00000475255 STK31Q9BXU1 1019 aa16.54■□□□□ 0.24
SEMA4D-217ENST00000475255 MAP3K19Q56UN5 1328 aa16.54■□□□□ 0.24
SEMA4D-217ENST00000475255 WDR33Q9C0J8 1336 aaKnown RBP16.54■□□□□ 0.24
SEMA4D-217ENST00000475255 CWC27Q6UX04 472 aaKnown RBP16.54■□□□□ 0.24
SEMA4D-217ENST00000475255 RPAP1Q9BWH6 1393 aaPredicted RBP16.53■□□□□ 0.24
SEMA4D-217ENST00000475255 SURF6O75683 361 aaKnown RBP16.53■□□□□ 0.24
SEMA4D-217ENST00000475255 AK2P54819 239 aa16.53■□□□□ 0.24
SEMA4D-217ENST00000475255 INTS4Q96HW7 963 aaKnown RBP16.53■□□□□ 0.24
SEMA4D-217ENST00000475255 IGSF3O75054 1194 aa16.53■□□□□ 0.24
SEMA4D-217ENST00000475255 SYT1P21579 422 aa16.53■□□□□ 0.24
SEMA4D-217ENST00000475255 MYRIPQ8NFW9 859 aa16.53■□□□□ 0.24
SEMA4D-217ENST00000475255 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
SEMA4D-217ENST00000475255 HAP1P54257 671 aaPredicted RBP16.52■□□□□ 0.24
SEMA4D-217ENST00000475255 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.24
SEMA4D-217ENST00000475255 DIP2CQ9Y2E4 1556 aa16.52■□□□□ 0.24
SEMA4D-217ENST00000475255 ATP8B2P98198 1209 aa16.52■□□□□ 0.23
SEMA4D-217ENST00000475255 DNM1Q05193 864 aaKnown RBP16.52■□□□□ 0.23
SEMA4D-217ENST00000475255 CCDC183Q5T5S1 534 aa16.52■□□□□ 0.23
SEMA4D-217ENST00000475255 FAM173BQ6P4H8 233 aa16.52■□□□□ 0.23
SEMA4D-217ENST00000475255 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.23
SEMA4D-217ENST00000475255 PIBF1Q8WXW3 757 aa16.52■□□□□ 0.23
SEMA4D-217ENST00000475255 PYCARDQ9ULZ3 195 aa16.52■□□□□ 0.23
SEMA4D-217ENST00000475255 PHF14O94880 888 aa16.51■□□□□ 0.23
SEMA4D-217ENST00000475255 RUFY3Q7L099 469 aa16.51■□□□□ 0.23
SEMA4D-217ENST00000475255 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
SEMA4D-217ENST00000475255 SNX14Q9Y5W7 946 aa16.51■□□□□ 0.23
SEMA4D-217ENST00000475255 CRB1P82279 1406 aa16.51■□□□□ 0.23
SEMA4D-217ENST00000475255 ZSCAN22P10073 491 aaPredicted RBP16.51■□□□□ 0.23
SEMA4D-217ENST00000475255 LTV1Q96GA3 475 aaPredicted RBP16.51■□□□□ 0.23
SEMA4D-217ENST00000475255 PHAXQ9H814 394 aaKnown RBP16.51■□□□□ 0.23
SEMA4D-217ENST00000475255 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
SEMA4D-217ENST00000475255 STX6O43752 255 aa16.5■□□□□ 0.23
SEMA4D-217ENST00000475255 HSPA4P34932 840 aa16.5■□□□□ 0.23
SEMA4D-217ENST00000475255 FERMT3Q86UX7 667 aa16.5■□□□□ 0.23
SEMA4D-217ENST00000475255 COL9A3Q14050 684 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms