RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 NEBLO76041 1014 aa12.84□□□□□ -0.35
VAPB-204ENST00000475243 HSP90AB3PQ58FF7 597 aa12.84□□□□□ -0.35
VAPB-204ENST00000475243 MTERF4Q7Z6M4 381 aaKnown RBP12.84□□□□□ -0.35
VAPB-204ENST00000475243 KIF1BPQ96EK5 621 aa12.84□□□□□ -0.35
VAPB-204ENST00000475243 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
VAPB-204ENST00000475243 NESP48681 1621 aa12.83□□□□□ -0.35
VAPB-204ENST00000475243 EPB41L2O43491 1005 aaKnown RBP12.83□□□□□ -0.35
VAPB-204ENST00000475243 HMGN5P82970 282 aaKnown RBP12.83□□□□□ -0.35
VAPB-204ENST00000475243 IFIT1P09914 478 aaKnown RBP12.83□□□□□ -0.36
VAPB-204ENST00000475243 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
VAPB-204ENST00000475243 UBA5Q9GZZ9 404 aa12.83□□□□□ -0.36
VAPB-204ENST00000475243 TMOD2Q9NZR1 351 aa12.83□□□□□ -0.36
VAPB-204ENST00000475243 RANBP6O60518 1105 aaKnown RBP12.83□□□□□ -0.36
VAPB-204ENST00000475243 ZSCAN31Q96LW9 406 aaPredicted RBP12.83□□□□□ -0.36
VAPB-204ENST00000475243 NAPBQ9H115 298 aa12.83□□□□□ -0.36
VAPB-204ENST00000475243 UQCRHLA0A096LP55 91 aa12.83□□□□□ -0.36
VAPB-204ENST00000475243 UQCRHP07919 91 aa12.83□□□□□ -0.36
VAPB-204ENST00000475243 ZNF652Q9Y2D9 606 aa12.83□□□□□ -0.36
VAPB-204ENST00000475243 DZIP1Q86YF9 867 aaKnown RBP12.83□□□□□ -0.36
VAPB-204ENST00000475243 EHBP1L1Q8N3D4 1523 aa12.82□□□□□ -0.36
VAPB-204ENST00000475243 WDR78Q5VTH9 848 aa12.82□□□□□ -0.36
VAPB-204ENST00000475243 WASF1Q92558 559 aa12.82□□□□□ -0.36
VAPB-204ENST00000475243 PPP6R1Q9UPN7 881 aa12.82□□□□□ -0.36
VAPB-204ENST00000475243 TAF7Q15545 349 aaPredicted RBP12.82□□□□□ -0.36
VAPB-204ENST00000475243 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
VAPB-204ENST00000475243 GPTP24298 496 aa12.82□□□□□ -0.36
VAPB-204ENST00000475243 MAP3K11Q16584 847 aa12.82□□□□□ -0.36
VAPB-204ENST00000475243 GBP2P32456 591 aaPredicted RBP12.81□□□□□ -0.36
VAPB-204ENST00000475243 CEP131Q9UPN4 1083 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 AKAP2Q9Y2D5 859 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 ANKRD30BQ9BXX2 1392 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 KIAA0754O94854 1291 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 SLFN5Q08AF3 891 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 CCDC97Q96F63 343 aaPredicted RBP12.81□□□□□ -0.36
VAPB-204ENST00000475243 SMTNL1A8MU46 457 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 MCM4P33991 863 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 CCDC144CPQ8IYA2 1237 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 CCT2P78371 535 aaKnown RBP12.81□□□□□ -0.36
VAPB-204ENST00000475243 RPAP2Q8IXW5 612 aaPredicted RBP12.81□□□□□ -0.36
VAPB-204ENST00000475243 TXLNBQ8N3L3 684 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 ZNF397Q8NF99 534 aaPredicted RBP12.81□□□□□ -0.36
VAPB-204ENST00000475243 TMX1Q9H3N1 280 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 CCDC66A2RUB6 948 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 MX1P20591 662 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 DNA2P51530 1060 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
VAPB-204ENST00000475243 SCLT1Q96NL6 688 aa12.81□□□□□ -0.36
VAPB-204ENST00000475243 CCDC96Q2M329 555 aa12.8□□□□□ -0.36
VAPB-204ENST00000475243 FOXO3O43524 673 aa12.8□□□□□ -0.36
VAPB-204ENST00000475243 IFIT5Q13325 482 aaKnown RBP12.8□□□□□ -0.36
VAPB-204ENST00000475243 ATAD2Q6PL18 1390 aa12.8□□□□□ -0.36
VAPB-204ENST00000475243 CCDC102AQ96A19 550 aa12.8□□□□□ -0.36
VAPB-204ENST00000475243 ZNF444Q8N0Y2 327 aaPredicted RBP12.8□□□□□ -0.36
VAPB-204ENST00000475243 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
VAPB-204ENST00000475243 SSH1Q8WYL5 1049 aa12.8□□□□□ -0.36
VAPB-204ENST00000475243 C11orf95C9JLR9 678 aaPredicted RBP12.8□□□□□ -0.36
VAPB-204ENST00000475243 GLRX3O76003 335 aaKnown RBP12.8□□□□□ -0.36
VAPB-204ENST00000475243 TTLL12Q14166 644 aaPredicted RBP12.8□□□□□ -0.36
VAPB-204ENST00000475243 NME9Q86XW9 330 aa12.8□□□□□ -0.36
VAPB-204ENST00000475243 C20orf194Q5TEA3 1177 aa12.8□□□□□ -0.36
VAPB-204ENST00000475243 ARHGAP29Q52LW3 1261 aa12.79□□□□□ -0.36
VAPB-204ENST00000475243 TRMT112Q9UI30 125 aaKnown RBP12.79□□□□□ -0.36
VAPB-204ENST00000475243 PPFIA3O75145 1194 aa12.79□□□□□ -0.36
VAPB-204ENST00000475243 ZNF287Q9HBT7 754 aa12.79□□□□□ -0.36
VAPB-204ENST00000475243 ZNF213O14771 459 aa12.79□□□□□ -0.36
VAPB-204ENST00000475243 LIG1P18858 919 aa12.79□□□□□ -0.36
VAPB-204ENST00000475243 RAB11FIP3O75154 756 aa12.79□□□□□ -0.36
VAPB-204ENST00000475243 TAF4BQ92750 862 aa12.79□□□□□ -0.36
VAPB-204ENST00000475243 ERICH4A6NGS2 130 aa12.78□□□□□ -0.36
VAPB-204ENST00000475243 ERLIN1O75477 346 aa12.78□□□□□ -0.36
VAPB-204ENST00000475243 DESP17661 470 aa12.78□□□□□ -0.36
VAPB-204ENST00000475243 C8orf76Q96K31 380 aa12.78□□□□□ -0.36
VAPB-204ENST00000475243 EIF3JO75822 258 aaKnown RBP12.78□□□□□ -0.36
VAPB-204ENST00000475243 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
VAPB-204ENST00000475243 DAPK1P53355 1430 aa12.78□□□□□ -0.36
VAPB-204ENST00000475243 TNIP1Q15025 636 aa12.78□□□□□ -0.36
VAPB-204ENST00000475243 CCDC113Q9H0I3 377 aa12.78□□□□□ -0.36
VAPB-204ENST00000475243 RPGRQ92834 1020 aaKnown RBP12.78□□□□□ -0.36
VAPB-204ENST00000475243 VAT1LQ9HCJ6 419 aa12.78□□□□□ -0.36
VAPB-204ENST00000475243 CDK13Q14004 1512 aaKnown RBP12.78□□□□□ -0.36
VAPB-204ENST00000475243 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
VAPB-204ENST00000475243 TNNT1P13805 278 aa12.77□□□□□ -0.36
VAPB-204ENST00000475243 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.36
VAPB-204ENST00000475243 CACNA2D4Q7Z3S7 1137 aa12.77□□□□□ -0.36
VAPB-204ENST00000475243 SLC12A7Q9Y666 1083 aa12.77□□□□□ -0.36
VAPB-204ENST00000475243 MAP3K12Q12852 859 aa12.77□□□□□ -0.37
VAPB-204ENST00000475243 ISM2Q6H9L7 571 aa12.77□□□□□ -0.37
VAPB-204ENST00000475243 JAKMIP3Q5VZ66 844 aa12.77□□□□□ -0.37
VAPB-204ENST00000475243 IQCEQ6IPM2 695 aa12.77□□□□□ -0.37
VAPB-204ENST00000475243 PPP1R12BO60237 982 aaPredicted RBP12.77□□□□□ -0.37
VAPB-204ENST00000475243 SNAPC4Q5SXM2 1469 aa12.77□□□□□ -0.37
VAPB-204ENST00000475243 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
VAPB-204ENST00000475243 IFIT3O14879 490 aaKnown RBP12.76□□□□□ -0.37
VAPB-204ENST00000475243 CPLX3Q8WVH0 158 aa12.76□□□□□ -0.37
VAPB-204ENST00000475243 A0A087WZG4 1122 aa12.76□□□□□ -0.37
VAPB-204ENST00000475243 IQCA1Q86XH1 822 aa12.76□□□□□ -0.37
VAPB-204ENST00000475243 CCDC148Q8NFR7 591 aa12.76□□□□□ -0.37
VAPB-204ENST00000475243 CTCFLQ8NI51 663 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms