RNA–Protein interactions for RNA: ENST00000475211.1

ERGIC3-213, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-213ENST00000475211 PTF1AQ7RTS3 328 aa18.06■□□□□ 0.48
ERGIC3-213ENST00000475211 NFATC2IPQ8NCF5 419 aa18.06■□□□□ 0.48
ERGIC3-213ENST00000475211 TRIM35Q9UPQ4 493 aa18.06■□□□□ 0.48
ERGIC3-213ENST00000475211 RGPD3A6NKT7 1758 aaPredicted RBP18.06■□□□□ 0.48
ERGIC3-213ENST00000475211 RGPD4Q7Z3J3 1758 aa18.06■□□□□ 0.48
ERGIC3-213ENST00000475211 SIPA1L3O60292 1781 aaPredicted RBP18.05■□□□□ 0.48
ERGIC3-213ENST00000475211 APBA3O96018 575 aa18.05■□□□□ 0.48
ERGIC3-213ENST00000475211 BAG6P46379 1132 aa18.05■□□□□ 0.48
ERGIC3-213ENST00000475211 CALD1Q05682 793 aaKnown RBP18.05■□□□□ 0.48
ERGIC3-213ENST00000475211 SMARCC1Q92922 1105 aaPredicted RBP18.05■□□□□ 0.48
ERGIC3-213ENST00000475211 KAT6BQ8WYB5 2073 aa18.03■□□□□ 0.48
ERGIC3-213ENST00000475211 PAPPAQ13219 1627 aa18.03■□□□□ 0.48
ERGIC3-213ENST00000475211 PLSCR1O15162 318 aa18.03■□□□□ 0.48
ERGIC3-213ENST00000475211 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
ERGIC3-213ENST00000475211 PALLDQ8WX93 1383 aa18.03■□□□□ 0.48
ERGIC3-213ENST00000475211 TAF7Q15545 349 aaPredicted RBP18.01■□□□□ 0.47
ERGIC3-213ENST00000475211 WWC1Q8IX03 1113 aa18.01■□□□□ 0.47
ERGIC3-213ENST00000475211 ATG3Q9NT62 314 aa18.01■□□□□ 0.47
ERGIC3-213ENST00000475211 BABAM1Q9NWV8 329 aa18.01■□□□□ 0.47
ERGIC3-213ENST00000475211 BTBD11A6QL63 1104 aa18■□□□□ 0.47
ERGIC3-213ENST00000475211 ASAP1Q9ULH1 1129 aa18■□□□□ 0.47
ERGIC3-213ENST00000475211 LY75O60449 1722 aa17.99■□□□□ 0.47
ERGIC3-213ENST00000475211 TTC5Q8N0Z6 440 aa17.99■□□□□ 0.47
ERGIC3-213ENST00000475211 ZNF790Q6PG37 636 aa17.98■□□□□ 0.47
ERGIC3-213ENST00000475211 CAMKK2Q96RR4 588 aa17.98■□□□□ 0.47
ERGIC3-213ENST00000475211 IL16Q14005 1332 aa17.98■□□□□ 0.47
ERGIC3-213ENST00000475211 UBR2Q8IWV8 1755 aa17.97■□□□□ 0.47
ERGIC3-213ENST00000475211 SENP3-EIF4A1A0A087X0R7 540 aa17.97■□□□□ 0.47
ERGIC3-213ENST00000475211 HMGB2P26583 209 aaKnown RBP17.97■□□□□ 0.47
ERGIC3-213ENST00000475211 EN1Q05925 392 aaPredicted RBP17.97■□□□□ 0.47
ERGIC3-213ENST00000475211 SLC27A3Q5K4L6 730 aa17.97■□□□□ 0.47
ERGIC3-213ENST00000475211 DEFB132Q7Z7B7 95 aa17.97■□□□□ 0.47
ERGIC3-213ENST00000475211 WDR63Q8IWG1 891 aa17.97■□□□□ 0.47
ERGIC3-213ENST00000475211 CFAP44Q96MT7 982 aa17.97■□□□□ 0.47
ERGIC3-213ENST00000475211 IFT57Q9NWB7 429 aa17.97■□□□□ 0.47
ERGIC3-213ENST00000475211 SALL2Q9Y467 1007 aaPredicted RBP17.97■□□□□ 0.47
ERGIC3-213ENST00000475211 KCPQ6ZWJ8 1503 aa17.97■□□□□ 0.47
ERGIC3-213ENST00000475211 KDM3BQ7LBC6 1761 aa17.96■□□□□ 0.47
ERGIC3-213ENST00000475211 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
ERGIC3-213ENST00000475211 GNAI1P63096 354 aa17.96■□□□□ 0.47
ERGIC3-213ENST00000475211 SLC39A6Q13433 755 aa17.96■□□□□ 0.47
ERGIC3-213ENST00000475211 TXNRD1Q16881 649 aa17.96■□□□□ 0.47
ERGIC3-213ENST00000475211 RREB1Q92766 1687 aa17.96■□□□□ 0.47
ERGIC3-213ENST00000475211 ZNF521Q96K83 1311 aa17.96■□□□□ 0.46
ERGIC3-213ENST00000475211 CICQ96RK0 1608 aaPredicted RBP17.95■□□□□ 0.46
ERGIC3-213ENST00000475211 LOC102724428A0A0B4J2F2 783 aa17.95■□□□□ 0.46
ERGIC3-213ENST00000475211 CHL1O00533 1208 aa17.95■□□□□ 0.46
ERGIC3-213ENST00000475211 SIK1P57059 783 aa17.95■□□□□ 0.46
ERGIC3-213ENST00000475211 HNRNPUQ00839 825 aaKnown RBP eCLIP17.95■□□□□ 0.46
ERGIC3-213ENST00000475211 TSPYL4Q9UJ04 414 aa17.95■□□□□ 0.46
ERGIC3-213ENST00000475211 ZNF853P0CG23 659 aa17.94■□□□□ 0.46
ERGIC3-213ENST00000475211 EZH2Q15910 746 aaKnown RBP17.94■□□□□ 0.46
ERGIC3-213ENST00000475211 FMNL2Q96PY5 1086 aa17.94■□□□□ 0.46
ERGIC3-213ENST00000475211 CCNL1Q9UK58 526 aaPredicted RBP17.94■□□□□ 0.46
ERGIC3-213ENST00000475211 PTCD1O75127 700 aaKnown RBP17.93■□□□□ 0.46
ERGIC3-213ENST00000475211 VSIG10Q8N0Z9 540 aa17.93■□□□□ 0.46
ERGIC3-213ENST00000475211 RBM42Q9BTD8 480 aaKnown RBP17.93■□□□□ 0.46
ERGIC3-213ENST00000475211 MIS18AQ9NYP9 233 aa17.93■□□□□ 0.46
ERGIC3-213ENST00000475211 HEG1Q9ULI3 1381 aa17.92■□□□□ 0.46
ERGIC3-213ENST00000475211 PROM2Q8N271 834 aa17.92■□□□□ 0.46
ERGIC3-213ENST00000475211 ZNF496Q96IT1 587 aaPredicted RBP17.92■□□□□ 0.46
ERGIC3-213ENST00000475211 LAS1LQ9Y4W2 734 aaKnown RBP17.92■□□□□ 0.46
ERGIC3-213ENST00000475211 KCNQ3O43525 872 aa17.91■□□□□ 0.46
ERGIC3-213ENST00000475211 ATP6V1AP38606 617 aa17.91■□□□□ 0.46
ERGIC3-213ENST00000475211 MBIPQ9NS73 344 aa17.91■□□□□ 0.46
ERGIC3-213ENST00000475211 NUP188Q5SRE5 1749 aa17.9■□□□□ 0.46
ERGIC3-213ENST00000475211 EIF4A1P60842 406 aaKnown RBP17.9■□□□□ 0.46
ERGIC3-213ENST00000475211 GOLGA2Q08379 1002 aa17.9■□□□□ 0.46
ERGIC3-213ENST00000475211 SLC4A9Q96Q91 983 aa17.9■□□□□ 0.46
ERGIC3-213ENST00000475211 MYH16Q9H6N6 1097 aa17.9■□□□□ 0.46
ERGIC3-213ENST00000475211 LRRC4BQ9NT99 713 aa17.9■□□□□ 0.46
ERGIC3-213ENST00000475211 ZBED9Q6R2W3 1325 aa17.9■□□□□ 0.46
ERGIC3-213ENST00000475211 C5P01031 1676 aa17.9■□□□□ 0.46
ERGIC3-213ENST00000475211 TEX13AQ9BXU3 409 aaPredicted RBP17.89■□□□□ 0.45
ERGIC3-213ENST00000475211 TJP1Q07157 1748 aa17.89■□□□□ 0.45
ERGIC3-213ENST00000475211 SNRPA1P09661 255 aaKnown RBP17.88■□□□□ 0.45
ERGIC3-213ENST00000475211 COL5A3P25940 1745 aaPredicted RBP17.87■□□□□ 0.45
ERGIC3-213ENST00000475211 E9PSI1 815 aa17.87■□□□□ 0.45
ERGIC3-213ENST00000475211 ITPK1Q13572 414 aa17.87■□□□□ 0.45
ERGIC3-213ENST00000475211 FANCIQ9NVI1 1328 aa17.87■□□□□ 0.45
ERGIC3-213ENST00000475211 TAF1LQ8IZX4 1826 aa17.86■□□□□ 0.45
ERGIC3-213ENST00000475211 HOXB7P09629 217 aa17.86■□□□□ 0.45
ERGIC3-213ENST00000475211 KCNQ4P56696 695 aa17.86■□□□□ 0.45
ERGIC3-213ENST00000475211 DNAJC10Q8IXB1 793 aa17.86■□□□□ 0.45
ERGIC3-213ENST00000475211 C4BP0C0L5 1744 aa17.86■□□□□ 0.45
ERGIC3-213ENST00000475211 LAMB4A4D0S4 1761 aa17.85■□□□□ 0.45
ERGIC3-213ENST00000475211 GIGYF1O75420 1035 aaPredicted RBP17.85■□□□□ 0.45
ERGIC3-213ENST00000475211 STARD3NLO95772 234 aa17.85■□□□□ 0.45
ERGIC3-213ENST00000475211 SOS1Q07889 1333 aaPredicted RBP17.85■□□□□ 0.45
ERGIC3-213ENST00000475211 NBPF14Q5TI25 921 aa17.85■□□□□ 0.45
ERGIC3-213ENST00000475211 LINC00116Q8NCU8 138 aa17.85■□□□□ 0.45
ERGIC3-213ENST00000475211 TSR2Q969E8 191 aaKnown RBP17.85■□□□□ 0.45
ERGIC3-213ENST00000475211 CNTNAP4Q9C0A0 1308 aa17.85■□□□□ 0.45
ERGIC3-213ENST00000475211 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
ERGIC3-213ENST00000475211 CYP19A1P11511 503 aaPredicted RBP17.83■□□□□ 0.44
ERGIC3-213ENST00000475211 SLFN5Q08AF3 891 aa17.83■□□□□ 0.44
ERGIC3-213ENST00000475211 RC3H1Q5TC82 1133 aaKnown RBP17.83■□□□□ 0.44
ERGIC3-213ENST00000475211 STK32BQ9NY57 414 aa17.83■□□□□ 0.44
ERGIC3-213ENST00000475211 CRKLP46109 303 aaKnown RBP17.82■□□□□ 0.44
ERGIC3-213ENST00000475211 AKT1S1Q96B36 256 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms