RNA–Protein interactions for RNA: ENST00000474743.5

SH3D19-206, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-206ENST00000474743 NBPF14Q5TI25 921 aa11.53□□□□□ -0.56
SH3D19-206ENST00000474743 CAMKK2Q96RR4 588 aa11.53□□□□□ -0.56
SH3D19-206ENST00000474743 PKD1L3Q7Z443 1732 aa11.52□□□□□ -0.56
SH3D19-206ENST00000474743 EMP3P54852 163 aa11.52□□□□□ -0.57
SH3D19-206ENST00000474743 HSP90AB2PQ58FF8 381 aa11.52□□□□□ -0.57
SH3D19-206ENST00000474743 EMILIN1Q9Y6C2 1016 aa11.52□□□□□ -0.57
SH3D19-206ENST00000474743 PLSCR1O15162 318 aa11.51□□□□□ -0.57
SH3D19-206ENST00000474743 TATP17735 454 aaPredicted RBP11.51□□□□□ -0.57
SH3D19-206ENST00000474743 TNNT2P45379 298 aaPredicted RBP11.51□□□□□ -0.57
SH3D19-206ENST00000474743 SGIP1Q9BQI5 828 aa11.51□□□□□ -0.57
SH3D19-206ENST00000474743 PSDA5PKW4 1024 aaPredicted RBP11.5□□□□□ -0.57
SH3D19-206ENST00000474743 NBPF6Q5VWK0 638 aa11.5□□□□□ -0.57
SH3D19-206ENST00000474743 MORC1Q86VD1 984 aa11.5□□□□□ -0.57
SH3D19-206ENST00000474743 USHBP1Q8N6Y0 703 aa11.5□□□□□ -0.57
SH3D19-206ENST00000474743 DDX54Q8TDD1 881 aaKnown RBP11.5□□□□□ -0.57
SH3D19-206ENST00000474743 NBPF4Q96M43 638 aa11.5□□□□□ -0.57
SH3D19-206ENST00000474743 WASHC2AQ641Q2 1341 aa11.5□□□□□ -0.57
SH3D19-206ENST00000474743 PCDH11XQ9BZA7 1347 aa11.5□□□□□ -0.57
SH3D19-206ENST00000474743 PCDH11YQ9BZA8 1340 aa11.5□□□□□ -0.57
SH3D19-206ENST00000474743 NCAPD2Q15021 1401 aa11.5□□□□□ -0.57
SH3D19-206ENST00000474743 R3HDM1Q15032 1099 aaKnown RBP11.49□□□□□ -0.57
SH3D19-206ENST00000474743 ZCRB1Q8TBF4 217 aaKnown RBP11.49□□□□□ -0.57
SH3D19-206ENST00000474743 PLEKHG2Q9H7P9 1386 aa11.49□□□□□ -0.57
SH3D19-206ENST00000474743 ACSBG1Q96GR2 724 aa11.48□□□□□ -0.57
SH3D19-206ENST00000474743 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
SH3D19-206ENST00000474743 POLKQ9UBT6 870 aa11.48□□□□□ -0.57
SH3D19-206ENST00000474743 SYTL4Q96C24 671 aaPredicted RBP11.47□□□□□ -0.57
SH3D19-206ENST00000474743 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.57
SH3D19-206ENST00000474743 KCNQ2O43526 872 aa11.45□□□□□ -0.58
SH3D19-206ENST00000474743 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
SH3D19-206ENST00000474743 PTF1AQ7RTS3 328 aa11.45□□□□□ -0.58
SH3D19-206ENST00000474743 STK32BQ9NY57 414 aa11.45□□□□□ -0.58
SH3D19-206ENST00000474743 SPG7Q9UQ90 795 aa11.45□□□□□ -0.58
SH3D19-206ENST00000474743 LY75O60449 1722 aa11.45□□□□□ -0.58
SH3D19-206ENST00000474743 PAPPAQ13219 1627 aa11.45□□□□□ -0.58
SH3D19-206ENST00000474743 NPC1L1Q9UHC9 1359 aa11.44□□□□□ -0.58
SH3D19-206ENST00000474743 TOGARAM1Q9Y4F4 1720 aa11.44□□□□□ -0.58
SH3D19-206ENST00000474743 IGSF1Q8N6C5 1336 aa11.44□□□□□ -0.58
SH3D19-206ENST00000474743 IRX5P78411 483 aaPredicted RBP11.44□□□□□ -0.58
SH3D19-206ENST00000474743 EIF4A2Q14240 407 aaKnown RBP11.44□□□□□ -0.58
SH3D19-206ENST00000474743 TXNRD1Q16881 649 aa11.44□□□□□ -0.58
SH3D19-206ENST00000474743 EYA1Q99502 592 aa11.44□□□□□ -0.58
SH3D19-206ENST00000474743 ITGB4P16144 1822 aa11.44□□□□□ -0.58
SH3D19-206ENST00000474743 CASZ1Q86V15 1759 aa11.44□□□□□ -0.58
SH3D19-206ENST00000474743 FKBP8Q14318 412 aa11.43□□□□□ -0.58
SH3D19-206ENST00000474743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.583e-6■□□□□ 9.2
SH3D19-206ENST00000474743 QSER1Q2KHR3 1735 aa11.43□□□□□ -0.58
SH3D19-206ENST00000474743 HMGB2P26583 209 aaKnown RBP11.42□□□□□ -0.58
SH3D19-206ENST00000474743 PRIM1P49642 420 aaKnown RBP11.42□□□□□ -0.58
SH3D19-206ENST00000474743 SLC27A3Q5K4L6 730 aa11.42□□□□□ -0.58
SH3D19-206ENST00000474743 PCDHB13Q9Y5F0 798 aa11.42□□□□□ -0.58
SH3D19-206ENST00000474743 C5P01031 1676 aa11.41□□□□□ -0.58
SH3D19-206ENST00000474743 CC2D1BQ5T0F9 858 aaKnown RBP11.41□□□□□ -0.58
SH3D19-206ENST00000474743 PROM2Q8N271 834 aa11.41□□□□□ -0.58
SH3D19-206ENST00000474743 ANO8Q9HCE9 1232 aaPredicted RBP11.41□□□□□ -0.58
SH3D19-206ENST00000474743 POTEB3A0JP26 581 aa11.4□□□□□ -0.58
SH3D19-206ENST00000474743 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
SH3D19-206ENST00000474743 CYP27B1O15528 508 aa11.4□□□□□ -0.58
SH3D19-206ENST00000474743 POTEBQ6S5H4 581 aa11.4□□□□□ -0.58
SH3D19-206ENST00000474743 RASEFQ8IZ41 740 aa11.4□□□□□ -0.58
SH3D19-206ENST00000474743 HSP90AB1P08238 724 aaKnown RBP11.39□□□□□ -0.59
SH3D19-206ENST00000474743 AMOTQ4VCS5 1084 aa11.39□□□□□ -0.59
SH3D19-206ENST00000474743 IFNL2Q8IZJ0 200 aa11.39□□□□□ -0.59
SH3D19-206ENST00000474743 SPON1Q9HCB6 807 aa11.39□□□□□ -0.59
SH3D19-206ENST00000474743 PPP1R1BQ9UD71 204 aaPredicted RBP11.39□□□□□ -0.59
SH3D19-206ENST00000474743 KDRP35968 1356 aa11.39□□□□□ -0.59
SH3D19-206ENST00000474743 TUBGCP6Q96RT7 1819 aa11.38□□□□□ -0.59
SH3D19-206ENST00000474743 PER1O15534 1290 aaPredicted RBP11.38□□□□□ -0.59
SH3D19-206ENST00000474743 SLC15A2Q16348 729 aa11.38□□□□□ -0.59
SH3D19-206ENST00000474743 PLEKHO1Q53GL0 409 aaPredicted RBP11.38□□□□□ -0.59
SH3D19-206ENST00000474743 C1orf141Q5JVX7 400 aa11.38□□□□□ -0.59
SH3D19-206ENST00000474743 SMARCC1Q92922 1105 aaPredicted RBP11.38□□□□□ -0.59
SH3D19-206ENST00000474743 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
SH3D19-206ENST00000474743 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
SH3D19-206ENST00000474743 CCNL1Q9UK58 526 aaPredicted RBP11.38□□□□□ -0.59
SH3D19-206ENST00000474743 PALLDQ8WX93 1383 aa11.38□□□□□ -0.59
SH3D19-206ENST00000474743 TAF1LQ8IZX4 1826 aa11.37□□□□□ -0.59
SH3D19-206ENST00000474743 PHKG2P15735 406 aa11.37□□□□□ -0.59
SH3D19-206ENST00000474743 MTHFSP49914 203 aa11.37□□□□□ -0.59
SH3D19-206ENST00000474743 CNGB1Q14028 1251 aaPredicted RBP11.37□□□□□ -0.59
SH3D19-206ENST00000474743 NKX1-1Q15270 411 aaPredicted RBP11.37□□□□□ -0.59
SH3D19-206ENST00000474743 SULT6B1Q6IMI4 303 aa11.37□□□□□ -0.59
SH3D19-206ENST00000474743 MPRIPQ6WCQ1 1025 aa11.37□□□□□ -0.59
SH3D19-206ENST00000474743 TMOD3Q9NYL9 352 aa11.37□□□□□ -0.59
SH3D19-206ENST00000474743 ZNF530Q6P9A1 599 aaPredicted RBP11.36□□□□□ -0.59
SH3D19-206ENST00000474743 RNF166Q96A37 237 aaPredicted RBP11.36□□□□□ -0.59
SH3D19-206ENST00000474743 CFAP53Q96M91 514 aa11.36□□□□□ -0.59
SH3D19-206ENST00000474743 DIAPH1O60610 1272 aaKnown RBP11.35□□□□□ -0.59
SH3D19-206ENST00000474743 IL13P35225 146 aa11.35□□□□□ -0.59
SH3D19-206ENST00000474743 DCAF5Q96JK2 942 aa11.35□□□□□ -0.59
SH3D19-206ENST00000474743 COL3A1P02461 1466 aaPredicted RBP11.35□□□□□ -0.59
SH3D19-206ENST00000474743 SCN11AQ9UI33 1791 aa11.35□□□□□ -0.59
SH3D19-206ENST00000474743 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
SH3D19-206ENST00000474743 C4BP0C0L5 1744 aa11.35□□□□□ -0.59
SH3D19-206ENST00000474743 AEBP1Q8IUX7 1158 aa11.34□□□□□ -0.59
SH3D19-206ENST00000474743 MTFR1LQ9H019 292 aa11.34□□□□□ -0.59
SH3D19-206ENST00000474743 LRRC4BQ9NT99 713 aa11.34□□□□□ -0.59
SH3D19-206ENST00000474743 TFCP2L1Q9NZI6 479 aa11.34□□□□□ -0.59
SH3D19-206ENST00000474743 ZNF831Q5JPB2 1677 aa11.33□□□□□ -0.6
SH3D19-206ENST00000474743 ZBTB7AO95365 584 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 204.6 ms