RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 FOXO3O43524 673 aa17.22■□□□□ 0.35
RPGR-206ENST00000474584 NCLP19338 710 aaKnown RBP17.22■□□□□ 0.35
RPGR-206ENST00000474584 ZGPATQ8N5A5 531 aaKnown RBP17.22■□□□□ 0.35
RPGR-206ENST00000474584 GNAI3P08754 354 aa17.21■□□□□ 0.35
RPGR-206ENST00000474584 ZSCAN23Q3MJ62 389 aa17.21■□□□□ 0.35
RPGR-206ENST00000474584 LRRCC1Q9C099 1032 aa17.21■□□□□ 0.35
RPGR-206ENST00000474584 MCCP23508 829 aa17.21■□□□□ 0.34
RPGR-206ENST00000474584 MCM2P49736 904 aa17.21■□□□□ 0.34
RPGR-206ENST00000474584 EXOC6BQ9Y2D4 811 aa17.21■□□□□ 0.34
RPGR-206ENST00000474584 CEP170BQ9Y4F5 1589 aaPredicted RBP17.2■□□□□ 0.34
RPGR-206ENST00000474584 IGSF1Q8N6C5 1336 aa17.2■□□□□ 0.34
RPGR-206ENST00000474584 AMPHP49418 695 aa17.19■□□□□ 0.34
RPGR-206ENST00000474584 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
RPGR-206ENST00000474584 RGPD8O14715 1765 aaPredicted RBP17.19■□□□□ 0.34
RPGR-206ENST00000474584 MX1P20591 662 aa17.19■□□□□ 0.34
RPGR-206ENST00000474584 NEK4P51957 841 aa17.19■□□□□ 0.34
RPGR-206ENST00000474584 FLIIQ13045 1269 aa17.19■□□□□ 0.34
RPGR-206ENST00000474584 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
RPGR-206ENST00000474584 SALL3Q9BXA9 1300 aa17.19■□□□□ 0.34
RPGR-206ENST00000474584 HTATSF1O43719 755 aaKnown RBP17.18■□□□□ 0.34
RPGR-206ENST00000474584 ESYT1Q9BSJ8 1104 aa17.18■□□□□ 0.34
RPGR-206ENST00000474584 PIK3C2AO00443 1686 aa17.18■□□□□ 0.34
RPGR-206ENST00000474584 PRPF40AO75400 957 aaKnown RBP17.18■□□□□ 0.34
RPGR-206ENST00000474584 EYA1Q99502 592 aa17.17■□□□□ 0.34
RPGR-206ENST00000474584 PXDNLA1KZ92 1463 aa17.17■□□□□ 0.34
RPGR-206ENST00000474584 ZSCAN30Q86W11 494 aa17.17■□□□□ 0.34
RPGR-206ENST00000474584 SRCIN1Q9C0H9 1055 aa17.17■□□□□ 0.34
RPGR-206ENST00000474584 ZDHHC9Q9Y397 364 aa17.17■□□□□ 0.34
RPGR-206ENST00000474584 SOS1Q07889 1333 aaPredicted RBP17.17■□□□□ 0.34
RPGR-206ENST00000474584 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
RPGR-206ENST00000474584 LTKP29376 864 aa17.16■□□□□ 0.34
RPGR-206ENST00000474584 ANAPC15P60006 121 aa17.16■□□□□ 0.34
RPGR-206ENST00000474584 TMX3Q96JJ7 454 aa17.16■□□□□ 0.34
RPGR-206ENST00000474584 KIF13AQ9H1H9 1805 aa17.16■□□□□ 0.34
RPGR-206ENST00000474584 TRIM6-TRIM34B2RNG4 842 aa17.16■□□□□ 0.34
RPGR-206ENST00000474584 ATP8B2P98198 1209 aa17.16■□□□□ 0.34
RPGR-206ENST00000474584 TSHZ3Q63HK5 1081 aa17.16■□□□□ 0.34
RPGR-206ENST00000474584 NGDNQ8NEJ9 315 aaKnown RBP17.16■□□□□ 0.34
RPGR-206ENST00000474584 DIP2AQ14689 1571 aa17.15■□□□□ 0.34
RPGR-206ENST00000474584 GNAT3A8MTJ3 354 aa17.15■□□□□ 0.34
RPGR-206ENST00000474584 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
RPGR-206ENST00000474584 GPT2Q8TD30 523 aa17.14■□□□□ 0.33
RPGR-206ENST00000474584 RILPL2Q969X0 211 aa17.14■□□□□ 0.33
RPGR-206ENST00000474584 ANO2Q9NQ90 1003 aa17.14■□□□□ 0.33
RPGR-206ENST00000474584 MSNP26038 577 aaKnown RBP17.14■□□□□ 0.33
RPGR-206ENST00000474584 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
RPGR-206ENST00000474584 EID1Q9Y6B2 187 aa17.14■□□□□ 0.33
RPGR-206ENST00000474584 MBD3O95983 291 aa17.13■□□□□ 0.33
RPGR-206ENST00000474584 CHMLP26374 656 aa17.13■□□□□ 0.33
RPGR-206ENST00000474584 UBE2Q2Q8WVN8 375 aa17.13■□□□□ 0.33
RPGR-206ENST00000474584 STAP2Q9UGK3 403 aa17.13■□□□□ 0.33
RPGR-206ENST00000474584 AOX1Q06278 1338 aa17.13■□□□□ 0.33
RPGR-206ENST00000474584 MAP3K5Q99683 1374 aa17.12■□□□□ 0.33
RPGR-206ENST00000474584 PRIM1P49642 420 aaKnown RBP17.12■□□□□ 0.33
RPGR-206ENST00000474584 CUL4AQ13619 759 aa17.12■□□□□ 0.33
RPGR-206ENST00000474584 HS1BP3Q53T59 392 aa17.12■□□□□ 0.33
RPGR-206ENST00000474584 INTS4Q96HW7 963 aaKnown RBP17.12■□□□□ 0.33
RPGR-206ENST00000474584 LRRFIP2Q9Y608 721 aaKnown RBP17.12■□□□□ 0.33
RPGR-206ENST00000474584 RBSNQ9H1K0 784 aa17.12■□□□□ 0.33
RPGR-206ENST00000474584 BABAM1Q9NWV8 329 aa17.12■□□□□ 0.33
RPGR-206ENST00000474584 AMOTL2Q9Y2J4 779 aa17.12■□□□□ 0.33
RPGR-206ENST00000474584 UBTFL1P0CB47 393 aaPredicted RBP17.11■□□□□ 0.33
RPGR-206ENST00000474584 NECTIN2Q92692 538 aa17.11■□□□□ 0.33
RPGR-206ENST00000474584 RBM27Q9P2N5 1060 aaKnown RBP17.11■□□□□ 0.33
RPGR-206ENST00000474584 PALD1Q9ULE6 856 aa17.11■□□□□ 0.33
RPGR-206ENST00000474584 BRD1O95696 1058 aa17.1■□□□□ 0.33
RPGR-206ENST00000474584 LRSAM1Q6UWE0 723 aa17.1■□□□□ 0.33
RPGR-206ENST00000474584 EPB41L2O43491 1005 aaKnown RBP17.1■□□□□ 0.33
RPGR-206ENST00000474584 FOXD4L5Q5VV16 416 aaPredicted RBP17.1■□□□□ 0.33
RPGR-206ENST00000474584 FOXD4L4Q8WXT5 416 aaPredicted RBP17.1■□□□□ 0.33
RPGR-206ENST00000474584 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
RPGR-206ENST00000474584 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
RPGR-206ENST00000474584 NLRP6P59044 892 aa17.09■□□□□ 0.33
RPGR-206ENST00000474584 IL17RAQ96F46 866 aa17.09■□□□□ 0.33
RPGR-206ENST00000474584 TMEM63CQ9P1W3 806 aa17.09■□□□□ 0.33
RPGR-206ENST00000474584 NWD1Q149M9 1564 aa17.09■□□□□ 0.33
RPGR-206ENST00000474584 TAF7Q15545 349 aaPredicted RBP17.09■□□□□ 0.33
RPGR-206ENST00000474584 SYCE3A1L190 88 aa17.08■□□□□ 0.33
RPGR-206ENST00000474584 TPM2P07951 284 aa17.08■□□□□ 0.33
RPGR-206ENST00000474584 HOXC9P31274 260 aa17.08■□□□□ 0.33
RPGR-206ENST00000474584 PDLIM2Q96JY6 352 aa17.08■□□□□ 0.33
RPGR-206ENST00000474584 USP44Q9H0E7 712 aa17.08■□□□□ 0.33
RPGR-206ENST00000474584 SLIT1O75093 1534 aa17.08■□□□□ 0.32
RPGR-206ENST00000474584 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
RPGR-206ENST00000474584 HDGFL1Q5TGJ6 251 aa17.07■□□□□ 0.32
RPGR-206ENST00000474584 NOL8Q76FK4 1167 aaKnown RBP17.07■□□□□ 0.32
RPGR-206ENST00000474584 TBX22Q9Y458 520 aa17.07■□□□□ 0.32
RPGR-206ENST00000474584 RRP9O43818 475 aaKnown RBP17.07■□□□□ 0.32
RPGR-206ENST00000474584 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.07■□□□□ 0.32
RPGR-206ENST00000474584 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
RPGR-206ENST00000474584 SSH3Q8TE77 659 aa17.07■□□□□ 0.32
RPGR-206ENST00000474584 SYAP1Q96A49 352 aaPredicted RBP17.07■□□□□ 0.32
RPGR-206ENST00000474584 CHAMP1Q96JM3 812 aa17.07■□□□□ 0.32
RPGR-206ENST00000474584 ANKARQ7Z5J8 1434 aa17.06■□□□□ 0.32
RPGR-206ENST00000474584 UNC5CLQ8IV45 518 aa17.06■□□□□ 0.32
RPGR-206ENST00000474584 ARHGAP23Q9P227 1491 aa17.06■□□□□ 0.32
RPGR-206ENST00000474584 HSP90AA2PQ14568 343 aaPredicted RBP17.05■□□□□ 0.32
RPGR-206ENST00000474584 UPF3BQ9BZI7 483 aaKnown RBP17.05■□□□□ 0.32
RPGR-206ENST00000474584 IL1RAPL2Q9NP60 686 aa17.05■□□□□ 0.32
RPGR-206ENST00000474584 LTN1O94822 1766 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms